These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1373#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 443 fasta sequence [TACCATCATTTAATATGGGCAATATGTTTTCAAATTTTGATAATATGGCATCAAGTGGAAATTGTCATTCCTTTGTATCAAATTCTGTAATGACATTTGGTAGTGATGGTCGTCCACAGGTTTATGAAGAAACCACATCCACAACAACTGTTCCAGGTGGCATAAAAGAAACAAAAACAACAGTCTGTGATTCTCGTACTGGAAAAAAAAAGATGGCTATTGAACATCATATTGGAGATAGAGCACATATTTTAGAAAGAGAACAAAATATTCATAGTGGTGAACAAGAGGAACATCAGGAATTTATTAATCTTGATGAAGAAGAAGCAGAAAGTTTTAATAAAGAATGGGAATCACGTGTTCGTCATTATGGAAATTACCATCATGGAAATTCTCATTATGGTATCCATGGTCATCGAAATAGATTCGATCATAGACAGTTG] [+] EMBL BI512786 [TACCATCATTTAATATGGGCAATATGTTTTCAAATTTTGATAATATGGCATCAAGTGGAAATTGTCATTCCTTTGTATCAAATTCTGTAATGACATTTGGTAGTGATGGTCGTCCACAGGTTTATGAAGAAACCACATCCACAACAACTGTTCCAGGTGGCATAAAAGAAACAAAAACAACAGTCTGTGATTCTCGTACTGGAAAAAAAAAGATGGCTATTGAACATCATATTGGAGATAGAGCACATATTTTAGAAAGAGAACAAAATATTCATAGTGGTGAACAAGAGGAACATCAGGAATTTATTAATCTTGATGAAGAAGAAGCAGAAAGTTTTAATAAAGAATGGGAATCACGTGTTCGTCATTATGGAAATTACCATCATGGAAATTCTCATTATGGTATCCATGGTCATCGAAATAGATTCGATCATAGACAGTTG] consensusID : consensus_1373#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 364 fasta sequence [ATCCTTTCAGTGAAATTTTCCATAAAAATTTATTTTGTTTTATACATTTTAAGTGTTTACGTTATTCTATTTTTAATTATCGATCGTAATCTTTTTCACAAATATTCTGTTTTTCAAAATGTCCTTTTTCGGATCATTGATGAGTGATCTCGACGATGATCCTATTTTTGGATCTCATATTCAATCTATGAGACATATGAATAATATGATGAATTCATTATTTAATGACCCATTTGGTATGATGGGTCATCCTAGCCATAATGCTATTGCACATGCTAATCATAGGAATCGAAATCATCAGGATGATCTTCAAGTATTACCATTTGGATTTCCACCATTACCATCATTTAATATGGGCAATATG] [+] EMBL BI506779 [ATCCTTTCAGTGAAATTTTCCATAAAAATTTATTTTGTTTTATACATTTTAAGTGTTTACGTTATTCTATTTTTAATTATCGATCGTAATCTTTTTCACAAATATTCTGTTTTTCAAAATGTCCTTTTTCGGATCATTGATGAGTGATCTCGACGATGATCCTATTTTTGGATCTCATATTCAATCTATGAGACATATGAATAATATGATGAATTCATTATTTAATGACCCATTTGGTATGATGGGTCATCCTAGCCATAATGCTATTGCACATGCTAATCATAGGAATCGAAATCATCAGGATGATCTTCAAGTATTACCATTTGGATTTCCACCATTACCATCATTTAATATGGGCAATATG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1373#0 TACCATCATTTAATATGGGCAATATGTTTTCAAATTTTGATAATATGGCATCAAGTGGAA 60 consensus_1373#1 ------------------------------------------------------------ consensus_1373#0 ATTGTCATTCCTTTGTATCAAATTCTGTAATGACATTTGGTAGTGATGGTCGTCCACAGG 120 consensus_1373#1 -------ATCCTTTCAGTGAAATTTTCCATAAAAATTTATTTTGTTTTATACATTTTAAG 53 ****** * ***** * * * **** * * * * * consensus_1373#0 TTTATGAAGAAACCACATCCACAACAACTGTTCCAGGTGGCATAAAAGAAACAAAAACAA 180 consensus_1373#1 TGT-TTACGTTATTCTATTTTTAATTATCGATC---GTAATCTTTTTCACAAATATTCTG 109 * * * * * * ** ** * * ** ** * * * * * * consensus_1373#0 CAGTCTGTGAT-TCTCGTACTGGAAAAAAAAAGATGGCTATTGAACATCATATTGGAGAT 239 consensus_1373#1 TTTTTCAAAATGTCCTTTTTCGGATCATTGATGAGTGATCTCGACGATGATCCTATTTTT 169 * ** ** * *** * * ** * * * ** ** ** * * consensus_1373#0 AGAGCACATATTTTAGAAAGAGAACAAAATATTCATAGTGGTGAACAAGAGGAACATCAG 299 consensus_1373#1 GGATCTCATATTCAATCTATGAGACATATGAATAATA-TGATGAATTCATTAT---TTAA 225 ** * ****** * * *** * * * *** ** **** * * consensus_1373#0 GAATTTATTAATCTTGATGAAGAAGAAGCAGAAAGTTTTAATAAAGAATGGGAATCACGT 359 consensus_1373#1 TGACCCATTTGGTATGATGGGTCATCCTAGCCATAATGCTATTGCACATGCTAATCATAG 285 * *** ***** * * * ** *** ***** consensus_1373#0 GT-TCGTCATTATGGAAATTACCATCATGGAAATTCTCATTATGGTATCCATGGTCATCG 418 consensus_1373#1 GAATCGAAATCATCAGGATGATCTTCAAGT--ATTACCATTTGGATTTCCACCATTACCA 343 * *** ** ** ** * * *** * *** **** * * **** * * * consensus_1373#0 AAATAGATTCGATCATAGACAGT-TG 443 consensus_1373#1 TCAT----TTAAT-ATGGGCAATATG 364 ** * ** ** * ** * ** |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |