These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1393#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 555 fasta sequence [AATCAGCTCAAATTAGTTTAAATACAAATAGCCTAAAACACATCTTTGTTTACATACTTGATATTATTATTATTACTATTATTATTAATATTATTATTATTATTATATTATATTATATTATTTTTATTGTTCTTTTTTTTTTACTCCATGTTTTTTAGTTCTCGTTATTACGTTTAAAGGCGACAACAAAAAGAGAAGTGTGACAAATGATAAAATGCCAAGCATCGATCGGTGTGTATTTCGATTTCGAGTAATCGACTGAAATGCGGAAAAACGATGAAATCAACGTGGATTAATTAAGAAATAAAAAATAAAAAAAAAAAAAAAGAAACGAAAACGCGGGTGTGCTTTTGAGCGATGAGAAACCATGTACACATATACACAACACGCACACTTACAAATAAGAAAAAAAATACACAAAACACACAGGATACATACAAGTACACGCGTACAAACACGTACACATACCGTATGCTTNNNGTTTAGTAGCGATTTATAAACGATAAGTGATAGAGTAATTTAAATTGATCATTGCTATCGATGACTATTATCGAC] [+] EMBL BI506667 [AATCAGCTCAAATTAGTTTAAATACAAATAGCCTAAAACACATCTTTGTTTACATACTTGATATTATTATTATTACTATTATTATTAATATTATTATTATTATTATATTATATTATATTATTTTTATTGTTCTTTTTTTTTTACTCCATGTTTTTTAGTTCTCGTTATTACGTTTAAAGGCGACAACAAAAAGAGAAGTGTGACAAATGATAAAATGCCAAGCATCGATCGGTGTGTATTTCGATTTCGAGTAATCGACTGAAATGCGGAAAAACGATGAAATCAACGTGGATTAATTAAGAAATAAAAAATAAAAAAAAAAAAAAAGAAACGAAAACGCGGGTGTGCTTTTGAGCGATGAGAAACCATGTACACATATACACAACACGCACACTTACAAATAAGAAAAAAAATACACAAAACACACAGGATACATACAAGTACACGCGTACAAACACGTACACATACCGTATGCTTNNNGTTTAGTAGCGATTTATAAACGATAAGTGATAGAGTAATTTAAATTGATCATTGCTATCGATGACTATTATCGAC] consensusID : consensus_1393#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 441 fasta sequence [TCAAGTTTCGTATCAACGATGTTGCGAATAATTCGCGGATTCGAAATATTATTTTCATTCTTCGTGTACATGATCGTCTCGATAATTACTGTTAGACCGTTAAATTCGTACTATCGGGCATTGATTAATTAGGATCATCACACCGTGGCTCGCCACAACGTGCGTCTGTGACGGTTGATAGTAGCATCAAAATGATCATTCAAGTAGTCGCACTCTCTATCATAAGTTATTAATTATCATTATCGTTATCATTATTAATATTATTATTATTATTATATTATATTATATTATTTTTATTGTTCTTTTTTTTTTACTCCATGTTTTTTAGTTCTCGTTATTACGTTTAAAGGCGACAACAAAAAGAGAAGTGTGACAAATGATAAAATGCCAAGCATCGATCGGTGTGTATTTCGATTTCGAGTAATCGACTGAAATGCGGAA] [-] EMBL BI511505 [TCAAGTTTCGTATCAACGATGTTGCGAATAATTCGCGGATTCGAAATATTATTTTCATTCTTCGTGTACATGATCGTCTCGATAATTACTGTTAGACCGTTAAATTCGTACTATCGGGCATTGATTAATTAGGATCATCACACCGTGGCTCGCCACAACGTGCGTCTGTGACGGTTGATAGTAGCATCAAAATGATCATTCAAGTAGTCGCACTCTCTATCATAAGTTATTAATTATCATTATCGTTATCATTATTAATATTATTATTATTATTATATTATATTATATTATTTTTATTGTTCTTTTTTTTTTACTCCATGTTTTTTAGTTCTCGTTATTACGTTTAAAGGCGACAACAAAAAGAGAAGTGTGACAAATGATAAAATGCCAAGCATCGATCGGTGTGTATTTCGATTTCGAGTAATCGACTGAAATGCGGAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1393#0 ------------------------------------------------------------ consensus_1393#1 TCAAGTTTCGTATCAACGATGTTGCGAATAATTCGCGGATTCGAAATATTATTTTCATTC 60 consensus_1393#0 ------------------------------------------------------------ consensus_1393#1 TTCGTGTACATGATCGTCTCGATAATTACTGTTAGACCGTTAAATTCGTACTATCGGGCA 120 consensus_1393#0 ------------------------------------------------AATCAGCTCAAA 12 consensus_1393#1 TTGATTAATTAGGATCATCACACCGTGGCTCGCCACAACGTGCGTCTGTGACGGTTGATA 180 * * * * * consensus_1393#0 TTAGTTTAAATACAAATAGCCTAAAACACATCTTTGTTTACATACTTGAT--ATTATTAT 70 consensus_1393#1 GTAGCATCAAAATGATCATTCAAGTAGTCGCACTCTCTATCATAAGTTATTAATTATCAT 240 *** * ** * * * * * * * * * **** * ** ***** ** consensus_1393#0 TATTACTATTATTATTAATATTATTATTATTATTATATTATATTATATTATTTTTATTGT 130 consensus_1393#1 TATCGTTATCATTATTAATATTATTATTATTATTATATTATATTATATTATTTTTATTGT 300 *** *** ************************************************** consensus_1393#0 TCTTTTTTTTTTACTCCATGTTTTTTAGTTCTCGTTATTACGTTTAAAGGCGACAACAAA 190 consensus_1393#1 TCTTTTTTTTTTACTCCATGTTTTTTAGTTCTCGTTATTACGTTTAAAGGCGACAACAAA 360 ************************************************************ consensus_1393#0 AAGAGAAGTGTGACAAATGATAAAATGCCAAGCATCGATCGGTGTGTATTTCGATTTCGA 250 consensus_1393#1 AAGAGAAGTGTGACAAATGATAAAATGCCAAGCATCGATCGGTGTGTATTTCGATTTCGA 420 ************************************************************ consensus_1393#0 GTAATCGACTGAAATGCGGAAAAACGATGAAATCAACGTGGATTAATTAAGAAATAAAAA 310 consensus_1393#1 GTAATCGACTGAAATGCGGAA--------------------------------------- 441 ********************* consensus_1393#0 ATAAAAAAAAAAAAAAAGAAACGAAAACGCGGGTGTGCTTTTGAGCGATGAGAAACCATG 370 consensus_1393#1 ------------------------------------------------------------ consensus_1393#0 TACACATATACACAACACGCACACTTACAAATAAGAAAAAAAATACACAAAACACACAGG 430 consensus_1393#1 ------------------------------------------------------------ consensus_1393#0 ATACATACAAGTACACGCGTACAAACACGTACACATACCGTATGCTTNNNGTTTAGTAGC 490 consensus_1393#1 ------------------------------------------------------------ consensus_1393#0 GATTTATAAACGATAAGTGATAGAGTAATTTAAATTGATCATTGCTATCGATGACTATTA 550 consensus_1393#1 ------------------------------------------------------------ consensus_1393#0 TCGAC 555 consensus_1393#1 ----- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |