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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_145#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 817 fasta sequence
[CAAGTGGACCTTCAAAAAGACCAAGATTTGATCAGCCATCTTCTCAACCTGCAAATGGTTATGCGACACAACCACCAAGTCAAGGTGGATATGGAGGAAGTACTAGCAATGCTTATGGTGGAGGACAACAACAACCACAACAGCAACAGCCTGTGGGATATGGTGGCGGTTATGGATCACAAAATTATACTCAATCGTCATATCAAAGTTATGAAAGTTATCAGCAACCTCCAGATTATGGTCAAACAGCTGGATATCCACCATCAGCAGCTACTGATAGTAGGTATGGTGGAGCACCTACTGTACCAGCTACAGGAGCTTTCAGTGCTGGTGATCCTTACAGTTATGGCAAAGCACCACCATCAGATTACTCGAGTCAAGATGGTGTATATGGAAAACAAGATTATGGTGGCAGTGCTGGTTACCAAAACGCCCAGTCTCAGCGACGTTATTAAATTACACATGCAACTATTTAATTCTAAATATTTAGATAACATTTCTTTTTTCCAAATTTAAAAAATAAAAGTATATCGTTCCTAGCGCGTGAAAAAGTTGGACAAATATTATTTGTCGTGAACACTAAGTGTTTTATAATTAATAATTTATTTGTCACTATGACAGATTTTTATATTCAAATGAGAAAAGTGAGCTGAAAAAAAGAATAATGCTTTCTAATGAAATTTGTGATTTTCTATCTTTGTCGCGCGCATGGAAGACGCGGTAAGACCAAACGATTGTTTAATTATTATAAAAAATTATAAAAAAAAAAAAAAAGTATAAATGACATGAACATTTTATACTTGACTTAGCAGTATAG]
[+] EMBL BI512226 [CAAGTGGACCTTCAAAAAGACCAAGATTTGATCAGCCATCTTCTCAACCTGCAAATGGTTATGCGACACAACCACCAAGTCAAGGTGGATATGGAGGAAGTACTAGCAATGCTTATGGTGGAGGACAACAACAACCACAACAGCAACAGCCTGTGGGATATGGTGGCGGTTATGGATCACAAAATTATACTCAATCGTCATATCAAAGTTATGAAAGTTATCAGCAACCTCCAGATTATGGTCAAACAGCTGGATATCCACCATCAGCAGCTACTGATAGTAGGTATGGTGGAGCACCTACTGTACCAGCTACAGGAGCTTTCAGTGCTGGTGATCCTTACAGTTATGGCAAAGCACCACCATCAGATTACTCGAGTCAAGATGGTGTATATGGAAAACAAGATTATGGTGGCAGTGCTGGTTACCAAAACGCCCAGTCTCAGCGACGTTATTAAATTACACATGCAACTATTTAATTCTAAATATTTAGA ]
[+] EMBL BI508646 [ GGTCAAACAGCTGGATATCCACCATCAGCAGCTACTGATAGTAGGTATGGTGGAGCACCTACTGTACCAGCTACAGGAGCTTTCAGTGCTGGTGATCCTTACAGTTATGGCAAAGCACCACCATCAGATTACTCGAGTCAAGATGGTGTATATGGAAAACAAGATTATGGTGGCAGTGCTGGTTACCAAAACGCCCAGTCTCAGCGACGTTATTAAATTACACATGCAACTATTTAATTCTAAATATTTAGATAACATTTCTTTTTTCCAAATTTAAAAAATAAAAGTATATCGTTCCTAGCGCGTGAAAAAGTTGGACAAATATTATTTGTCGTGAACACTAAGTGTTTTATAATTAATAATTTATTTGTCACTATGACAGATTTTTATATTCAAATGAGAAAAGTGAGCTGAAAAAAAGAATAATGCTTTCTAATGAAATTTGTGATTTTCTATCTTTGTCGCGCGCATGGAAGACGCGGTAAGACCAAACGATTGTTTAATTATTATAAAAAATTATAAAAAAAAAAAAAAAGTATAAATGACATGAACATTTTATACTTGACTTAGCAGTATAG]
consensusID : consensus_145#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 513 fasta sequence
[AAAAGATTATTTAGAAATAAGTGAAATATATATCTATAAATGGAAGGTGCACCAAGATTTGATCAGCCATCTTCTCAACCTGCAAATGGTTATGCGACACAACCACCAAGTCAAGGTGGATATGGAGGAAGTACTAGCAATGCTTATGGTGGAGGACAACAACAACCACAACAGCAACAGCCTGTGGGATATGGTGGCGGTTATGGATCACAAAATTATACTCAATCGTCATATCAAAGTTATGAAAGTTATCAGCAACCTCCAGATTATGGTCAAACAGCTGGATATCCACCATCAGCAGCTACTGATAGTAGGTATGGTGGAGCACCTACTGTACCAGCTACAGGAGCTTTCAGTGCTGGTGATCCTTACAGTTATGGCAAAGCACCACCATCAGATTACTCGAGTCAAGATGGTGTATATGGAAAACAAGATTATGGTTGATAATGACTATGCTGTCACAGATGGTACTACCAATTCATGAGCCAAGAAACATCTGCCACATGACTGGCA]
[+] EMBL BI515661 [AAAAGATTATTTAGAAATAAGTGAAATATATATCTATAAATGGAAGGTGCACCAAGATTTGATCAGCCATCTTCTCAACCTGCAAATGGTTATGCGACACAACCACCAAGTCAAGGTGGATATGGAGGAAGTACTAGCAATGCTTATGGTGGAGGACAACAACAACCACAACAGCAACAGCCTGTGGGATATGGTGGCGGTTATGGATCACAAAATTATACTCAATCGTCATATCAAAGTTATGAAAGTTATCAGCAACCTCCAGATTATGGTCAAACAGCTGGATATCCACCATCAGCAGCTACTGATAGTAGGTATGGTGGAGCACCTACTGTACCAGCTACAGGAGCTTTCAGTGCTGGTGATCCTTACAGTTATGGCAAAGCACCACCATCAGATTACTCGAGTCAAGATGG ]
[+] EMBL BI504747 [ ATTTGATCAGCCATCTTCTCAACCTGCAAATGGTTATGCGACACAACCACCAAGTCAAGGTGGATATGGAGGAAGTACTAGCAATGCTTATGGTGGAGGACAACAACAACCACAACAGCAACAGCCTGTGGGATATGGTGGCGGTTATGGATCACAAAATTATACTCAATCGTCATATCAAAGTTATGAAAGTTATCAGCAACCTCCAGATTATGGTCAAACAGCTGGATATCCACCATCAGCAGCTACTGATAGTAGGTATGGTGGAGCACCTACTGTACCAGCTACAGGAGCTTTCAGTGCTGGTGATCCTTACAGTTATGGCAAAGCACCACCATCAGATTACTCGAGTCAAGATGGTGTATATGGAAAACAAGATTATGGTTGATAATGACTATGCTGTCACAGATGGTACTACCAATTCATGAGCCAAGAAACATCTGCCACATGACTGGCA]
consensusID : consensus_145#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 505 fasta sequence
[GACCAAGATTTGATCAGCCATCTTCTCAACCTGCAAATGGTTATGCGACACAACCACCAAGTCAAGGTGGATATGGAGGAAGTACTAGCAATGCTTATGGTGGAGGACAACAACAACCACAACAGCAACAGCCTGTGGGATATGGTGGCGGTTATGGATCACAAAATTATACTCAATCGTCATATCAAAGTTATGAAAGTTATCAGCAACCTCCAGATTATGGTCAAACAGCTGGATATCCACCATCAGCAGCTACTGATAGTAGGTATGGTGGAGCACCTACTGTACCAGCTACAGGAGCTTTCAGTGCTGGTGATCCTTACAGTTATGGCAAAGCACCACCATCAGCCAATTACCAGCAGGAGGCAGTGGTAGCAGTAGCAGGGGGTGGGGGTGCAGGTTATGCCCCCATTAACTCTTACGATGACCGATCTTCTAATGCCACTTCTATGACCAACAGGGGTGGTTACTCGACACAACTTTATGATTACTCGAGTCAAGATGG]
[+] EMBL BI512759 [GACCAAGATTTGATCAGCCATCTTCTCAACCTGCAAATGGTTATGCGACACAACCACCAAGTCAAGGTGGATATGGAGGAAGTACTAGCAATGCTTATGGTGGAGGACAACAACAACCACAACAGCAACAGCCTGTGGGATATGGTGGCGGTTATGGATCACAAAATTATACTCAATCGTCATATCAAAGTTATGAAAGTTATCAGCAACCTCCAGATTATGGTCAAACAGCTGGATATCCACCATCAGCAGCTACTGATAGTAGGTATGGTGGAGCACCTACTGTACCAGCTACAGGAGCTTTCAGTGCTGGTGATCCTTACAGTTATGGCAAAGCACCACCATCAGCCAATTACCAGCAGGAGGCAGTGGTAGCAGTAGCAGGGGGTGGGGGTGCAGGTTATGCCCCCATTAACTCTTACGATGACCGATCTTCTAATGCCACTTCTATGACCAACAGGGGTGGTTACTCGACACAACTTTATGATTACTCGAGTCAAGATGG]
consensusID : consensus_145#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 430 fasta sequence
[ATATATTCTTTTATCATAAATATATCACAATCAATTATTAAATTTATATAAATTTTAAAAGGTCAGTCTTTCAGATAACATGTGAGGAAAATACGATATTTTATATCTTTTTACAATACTCGCCATTGAAAAATAAAAATACACTTGAATCTTCTTAGGAACAACGTCGATGCCAGTCATGTGGCAGATGTTTCTTGGCTCATGAATTGGTAGTACCATCTGTGACAGCATAGTCATTATCAACCTAAAGAAATTAATAATAAAAAATTAGAAATTGATAGATAAATAATAGAGACGAAGTATCTTATAAATACCTATCATTAACGCATTTATATGTAGTATATTTGAATGTTGTCCATTATCAATTAAATTATAAAAATATATTATGCTCTTAAATTTTTTTTTCATAATTATTTTGTAAATTCCTTCC]
[+] EMBL BI514718 [ATATATTCTTTTATCATAAATATATCACAATCAATTATTAAATTTATATAAATTTTAAAAGGTCAGTCTTTCAGATAACATGTGAGGAAAATACGATATTTTATATCTTTTTACAATACTCGCCATTGAAAAATAAAAATACACTTGAATCTTCTTAGGAACAACGTCGATGCCAGTCATGTGGCAGATGTTTCTTGGCTCATGAATTGGTAGTACCATCTGTGACAGCATAGTCATTATCAACCTAAAGAAATTAATAATAAAAAATTAGAAATTGATAGATAAATAATAGAGACGAAGTATCTTATAAATACCTATCATTAACGCATTTATATGTAGTATATTTGAATGTTGTCCATTATCAATTAAATTATAAAAATATATTATGCTCTTAAATTTTTTTTTCATAATTATTTTGTAAATTCCTTCC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_145#0 ------------------------CAAGTGGACCTTCAAAAAGA-------CCAAGATTT 29
consensus_145#1 AAAAGATTATTTAGAAATAAGTGAAATATATATCTATAAATGGAAGGTGCACCAAGATTT 60
consensus_145#2 -------------------------------------------------GACCAAGATTT 11
consensus_145#3 ------------------------------------------------------------
consensus_145#0 GATCAGCCATCTTCTCAACCTGCAAATGGTTATGCGACACAACCACCAAGTCAAGGTGGA 89
consensus_145#1 GATCAGCCATCTTCTCAACCTGCAAATGGTTATGCGACACAACCACCAAGTCAAGGTGGA 120
consensus_145#2 GATCAGCCATCTTCTCAACCTGCAAATGGTTATGCGACACAACCACCAAGTCAAGGTGGA 71
consensus_145#3 ------ATATATTCTTTTATCATAAATA--TATCACAATCAATTATTAAATTTATATAAA 52
** **** **** *** * *** * ** * * * *
consensus_145#0 TATGGAGGAAGTACTAGCAATGCTTATGGTGGAGGACAACAACAACCACAACAGCAACAG 149
consensus_145#1 TATGGAGGAAGTACTAGCAATGCTTATGGTGGAGGACAACAACAACCACAACAGCAACAG 180
consensus_145#2 TATGGAGGAAGTACTAGCAATGCTTATGGTGGAGGACAACAACAACCACAACAGCAACAG 131
consensus_145#3 T-TTTAAAAGGT-----CAGTCTTTCAGATAACATGTGAGGAAAAT-ACGATATTTTATA 105
* * * * ** ** * ** * * * * ** ** * *
consensus_145#0 CCTGTGGGATATGGTGGCGGTTATGGATCACAAAATTATACTC-AATCGTCATATCAAAG 208
consensus_145#1 CCTGTGGGATATGGTGGCGGTTATGGATCACAAAATTATACTC-AATCGTCATATCAAAG 239
consensus_145#2 CCTGTGGGATATGGTGGCGGTTATGGATCACAAAATTATACTC-AATCGTCATATCAAAG 190
consensus_145#3 TCTTTTTACAATACTCGCCAT--TGAAAAATAAAAATACACTTGAATCTTCTTAGGAACA 163
** * ** * ** * ** * * **** ** *** **** ** ** **
consensus_145#0 TTATGAAAGTTA-TCA-GCAACCTCCAGATTATGGTCAAACAGCTGGATATCCACCATCA 266
consensus_145#1 TTATGAAAGTTA-TCA-GCAACCTCCAGATTATGGTCAAACAGCTGGATATCCACCATCA 297
consensus_145#2 TTATGAAAGTTA-TCA-GCAACCTCCAGATTATGGTCAAACAGCTGGATATCCACCATCA 248
consensus_145#3 ACGTCGATGCCAGTCATGTGGCAGATGTTTCTTGGCTCATGAATTGGTAGT--ACCATCT 221
* * * * *** * * * *** * * *** * ******
consensus_145#0 GCAGCTACTGATAGTAGGTATGGTGGAGCACCTACTGTACCAGCTACAGGAGCTTTCAGT 326
consensus_145#1 GCAGCTACTGATAGTAGGTATGGTGGAGCACCTACTGTACCAGCTACAGGAGCTTTCAGT 357
consensus_145#2 GCAGCTACTGATAGTAGGTATGGTGGAGCACCTACTGTACCAGCTACAGGAGCTTTCAGT 308
consensus_145#3 GTGACAGC--ATAGTCATTATCA------ACCTAAAGAAATTAATAATAAAAAATTAGAA 273
* * * ***** *** ***** * * ** * **
consensus_145#0 GCTGGTGATCCTTACAGTTATGGCAAAGCACCACCATCAG---ATTACTCGAGTCAAGAT 383
consensus_145#1 GCTGGTGATCCTTACAGTTATGGCAAAGCACCACCATCAG---ATTACTCGAGTCAAGAT 414
consensus_145#2 GCTGGTGATCCTTACAGTTATGGCAAAGCACCACCATCAGCCAATTACCAGCAGGAGGCA 368
consensus_145#3 ATTGAT-AGATAAATAATAGAGACGAAGTATC-TTATAAA-----TACCTATCATTAACG 326
** * * * * * * * *** * * ** * ***
consensus_145#0 GGTGTATATGGAAAACAAGATTATGGTGGCAGTGCTGGTTACCAAAACGCCCAGTCTCAG 443
consensus_145#1 GGTGTATATGGAAAACAAGATTATGGT--------TGATAATGACTATGC----TGTCAC 462
consensus_145#2 GTGGTAGCAGTAGCAGGGGGTGGGGGTGCAGGTTATGCCCCCATTAACTCTTACGATGAC 428
consensus_145#3 CATTTATATGTAGTATATTTGAATGTTGTC---CATTATCAATTAAATTATAAAAATATA 383
** * * * * * * * *
consensus_145#0 CGACGTTATTAAATTACACATGCAACTATTTAATTCTAAATATTTAGATAACATTTCTTT 503
consensus_145#1 AGATGGTACTAC-CAATTCATG-AGCCAAGAAACATCTGCCACATGACTGGCA------- 513
consensus_145#2 CGATCTTCTAATGCCACTTCTATGACCAACAGGGGT-GGTTACTCGACACAACTTTATGA 487
consensus_145#3 TTATGCTCTTAAATTTTTTTTTCATAATTATTTTGTAAATTCCTTCC------------- 430
* * * *
consensus_145#0 TTTCCAAATTTAAAAAATAAAAGTATATCGTTCCTAGCGCGTGAAAAAGTTGGACAAATA 563
consensus_145#1 ------------------------------------------------------------
consensus_145#2 TTACTCGAGTCAAGATGG------------------------------------------ 505
consensus_145#3 ------------------------------------------------------------
consensus_145#0 TTATTTGTCGTGAACACTAAGTGTTTTATAATTAATAATTTATTTGTCACTATGACAGAT 623
consensus_145#1 ------------------------------------------------------------
consensus_145#2 ------------------------------------------------------------
consensus_145#3 ------------------------------------------------------------
consensus_145#0 TTTTATATTCAAATGAGAAAAGTGAGCTGAAAAAAAGAATAATGCTTTCTAATGAAATTT 683
consensus_145#1 ------------------------------------------------------------
consensus_145#2 ------------------------------------------------------------
consensus_145#3 ------------------------------------------------------------
consensus_145#0 GTGATTTTCTATCTTTGTCGCGCGCATGGAAGACGCGGTAAGACCAAACGATTGTTTAAT 743
consensus_145#1 ------------------------------------------------------------
consensus_145#2 ------------------------------------------------------------
consensus_145#3 ------------------------------------------------------------
consensus_145#0 TATTATAAAAAATTATAAAAAAAAAAAAAAAGTATAAATGACATGAACATTTTATACTTG 803
consensus_145#1 ------------------------------------------------------------
consensus_145#2 ------------------------------------------------------------
consensus_145#3 ------------------------------------------------------------
consensus_145#0 ACTTAGCAGTATAG 817
consensus_145#1 --------------
consensus_145#2 --------------
consensus_145#3 --------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |