These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1552#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 456 fasta sequence [AGCCACGGAGCGTGTATAAGAGAGAGAATGTCGTTCACCCGCCTCGTCCAGGGAAAAAAAATTCAGAGAAAATTCAAATTCACGACAATTTCGATAAATTCGTTACATTATTTTCCCAGAGGAAGGTGATTCATAGTTTCCTCGTGTATCGATTTATCATACGCCGATCCGAGGCCGTGCGTGTGATATAGAGGAAATCGGTAATTTCCCTTTGCGTCGATTGTCGAAAATGGTGGAGCGAGCAAACAAACGACAAACGCGTGTCCGATCGATCGACGTTCCAAAGTCGAAACGCTTGGACGATCGGCGATCTCGAAGCTGTCGCTTGAGAGAGGGAATTTTCGCCACCTTTTGTCGCGATCTCGAAACGCCAGCCGAGATCGGACGCGACAGTTTCGAGATCGGCCACCCGAGTTATCCTCCTCCTCCCCCCTCCTTCCTCGCATTAGGGCTGCT] [+] EMBL BI513273 [AGCCACGGAGCGTGTATAAGAGAGAGAATGTCGTTCACCCGCCTCGTCCAGGGAAAAAAAATTCAGAGAAAATTCAAATTCACGACAATTTCGATAAATTCGTTACATTATTTTCCCAGAGGAAGGTGATTCATAGTTTCCTCGTGTATCGATTTATCATACGCCGATCCGAGGCCGTGCGTGTGATATAGAGGAAATCGGTAATTTCCCTTTGCGTCGATTGTCGAAAATGGTGGAGCGAGCAAACAAACGACAAACGCGTGTCCGATCGATCGACGTTCCAAAGTCGAAACGCTTGGACGATCGGCGATCTCGAAGCTGTCGCTTGAGAGAGGGAATTTTCGCCACCTTTTGTCGCGATCTCGAAACGCCAGCCGAGATCGGACGCGACAGTTTCGAGATCGGCCACCCGAGTTATCCTCCTCCTCCCCCCTCCTTCCTCGCATTAGGGCTGCT] consensusID : consensus_1552#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 428 fasta sequence [TGCATGTATATATATATAACAATCGTATTTCATCCGTTTACGGATAGAAATCTTGCCACGACGATCAATCGATCACGCGGAGGAGAAGGAGGAATCGCGACCACGTTTCTGTCTTAATTTCGAATCAGCCGCGAATCGAATTATTATTATTTTTCAGCCTACTTATTATTATTATAAGAAAAGGTACGTGGAGGATTTGATTGGTGCACGATCCGCGGTAAACGGAGATCCAATCAACGACACGAAACTTCTTTCGAAAGCTTCTCGGCGGGAAATTTGAAAAACGTTCGAAATCTCGACACGNNGATTATCTGAATTTCCACTGGTCGGACAGCAACTACTCGAGTATCGCCGTCTAATCCTACGTAATACCCTAATAGCAGCCCTAATGCGAGGAAGGAGGGGGGAGGAGGAGGATAACTCGGGTG] [+] EMBL BI515156 [TGCATGTATATATATATAACAATCGTATTTCATCCGTTTACGGATAGAAATCTTGCCACGACGATCAATCGATCACGCGGAGGAGAAGGAGGAATCGCGACCACGTTTCTGTCTTAATTTCGAATCAGCCGCGAATCGAATTATTATTATTTTTCAGCCTACTTATTATTATTATAAGAAAAGGTACGTGGAGGATTTGATTGGTGCACGATCCGCGGTAAACGGAGATCCAATCAACGACACGAAACTTCTTTCGAAAGCTTCTCGGCGGGAAATTTGAAAAACGTTCGAAATCTCGACACGNNGATTATCTGAATTTCCACTGGTCGGACAGCAACTACTCGAGTATCGCCGTCTAATCCTACGTAATACCCTAATAGCAGCCCTAATGCGAGGAAGGAGGGGGGAGGAGGAGGATAACTCGGGTG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1552#0 AGCCACGGAGCGTGTATAAGAGAGAGAAT-GTCGTTCACCCGCCTCGTCCAGGGAAAAAA 59 consensus_1552#1 ------TGCATGTATATATATATAACAATCGTATTTCATCCGTTTACGGATAGAAATCTT 54 * ** **** * *** ** **** *** * * ** consensus_1552#0 AATTCAGAGAAAATTCAAATTCACGACAATTTCGATAAATTCGTTACATTATTTTCCCAG 119 consensus_1552#1 GCCACGACGATCAATCGATCACGCGGAGGAGAAGGAGGAATCGCGACCACGTTT-CTGTC 113 * ** * ** * * ** * * *** ** *** * consensus_1552#0 AGGAAGGTGATTCATAGTTTCCTCGTGTATCGATTTATCATACGCCGATCCGAGGCCGTG 179 consensus_1552#1 TTAATTTCGAATCAGCCGCGAATCGAATTATTATTATTTTTCAGCCTACTTATTATTAT- 172 * ** *** *** * *** * * *** * * consensus_1552#0 CGTGTGATATAGAGGAAATCGGTAATTTCCCTT-TGCGTCGATTGTCGAAAATGGTGGAG 238 consensus_1552#1 --TATAAGAAAAGGTACGTGGAGGATTTGATTGGTGCACGATCCGCGGTAAACGGAGATC 230 * * * * * * * * * **** * *** * * *** ** * consensus_1552#0 CGAGCAAACAAACGA---------CAAACGCGTGTCCGA-------TCGATCGACGTTCC 282 consensus_1552#1 CAATCAACGACACGAAACTTCTTTCGAAAGCTTCTCGGCGGGAAATTTGAAAAACGTTCG 290 * * *** * **** * ** ** * ** * * ** ****** consensus_1552#0 AAAGTCGAAACGCTTGGACGATCGGCGATCTCGAAGCTGTCGCTTGAGAGAGGGAATTTT 342 consensus_1552#1 AAA-TCTCGACACGNNGATTATCTGAATTTCCACTGGTCGGACAGCAACTACTCGAGTAT 349 *** ** ** * ** *** * * * * * * * * * * * consensus_1552#0 CGCCACCT--TTTGTCGCGATCTCGAAACGCCAGCCGAGATC---GGACGCGACAGTTTC 397 consensus_1552#1 CGCCGTCTAATCCTACGTAATACCCTAATAGCAGCCCTAATGCGAGGAAGGAGGGGGGAG 409 **** ** * ** ** * ** ***** ** *** * * consensus_1552#0 GAGATCGGCCACCCGAGTTATCCTCCTCCTCCCCCCTCCTTCCTCGCATTAGGGCTGCT 456 consensus_1552#1 GAGGAGGATAACTCGGGTG---------------------------------------- 428 *** * ** ** ** |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |