These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1570#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 379 fasta sequence [TTTCATTCGTTTCTTCGACGATTGCAAAATTTCTGAACGTTCGGAAGAAAAGGCAAGAGAGAGACGGTCGAAGAATTCGCAATTTCGAAGACCTCTTGACGAGAGATCGAGGAACAATCGTGGCAAAGGAATTATTCGTGCGGCAACGACGCAGTGAAACAACGTACAACCTCGTTCTGCTACGGACGAATCCATATCCATATTATTTTCCTCGAGAAAAGCCAGCATCCTTGACAAATGCTCGTATAATCTAATATCGTATAATAATAAAATCGAGCAGCTTGCGTGCGTCGAGAGTTGTGGTGTGCGCGAGATTCAAATCGCGAAATCAAAAAAAAAGAAAAGAAAAAAAAAGAAAAAAAGAAAAAGAGAAAAAAAA] [+] EMBL BI505793 [TTTCATTCGTTTCTTCGACGATTGCAAAATTTCTGAACGTTCGGAAGAAAAGGCAAGAGAGAGACGGTCGAAGAATTCGCAATTTCGAAGACCTCTTGACGAGAGATCGAGGAACAATCGTGGCAAAGGAATTATTCGTGCGGCAACGACGCAGTGAAACAACGTACAACCTCGTTCTGCTACGGACGAATCCATATCCATATTATTTTCCTCGAGAAAAGCCAGCATCCTTGACAAATGCTCGTATAATCTAATATCGTATAATAATAAAATCGAGCAGCTTGCGTGCGTCGAGAGTTGTGGTGTGCGCGAGATTCAAATCGCGAAATCAAAAAAAAAGAAAAGAAAAAAAAAGAAAAAAAGAAAAAGAGAAAAAAAA] consensusID : consensus_1570#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 353 fasta sequence [GCACACCACAACTCTCGACGCACGCAAGCTGCTCGATTTTATTATTATACGATATAACGCTGATAAGTAAGATAAAAAAGAAAAAAAAAGACGAAGCAGAACAAATCCGTTCGGTAGGTTGTGTAGCTTGTCGAGAGAACGACACGCACCCGCTTCTCTGACTCGTAGCGCGATTAGCAATTTCGTTTCGAGTGATTCCTCTTTCTTCTGAAGGTCGATTGAAGAGAAAAAGAAGAAAGAAAGAAAGAAAGGGGGAGAAAAGCACGAAAAGAGGGGAAAAACACACATATATATATATACACGCATATATGTACACGCAAAAAGAAAAGAGAAATTGAAAAGATAAAAAAAAA] [+] EMBL BI507808 [GCACACCACAACTCTCGACGCACGCAAGCTGCTCGATTTTATTATTATACGATATAACGCTGATAAGTAAGATAAAAAAGAAAAAAAAAGACGAAGCAGAACAAATCCGTTCGGTAGGTTGTGTAGCTTGTCGAGAGAACGACACGCACCCGCTTCTCTGACTCGTAGCGCGATTAGCAATTTCGTTTCGAGTGATTCCTCTTTCTTCTGAAGGTCGATTGAAGAGAAAAAGAAGAAAGAAAGAAAGAAAGGGGGAGAAAAGCACGAAAAGAGGGGAAAAACACACATATATATATATACACGCATATATGTACACGCAAAAAGAAAAGAGAAATTGAAAAGATAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1570#0 TTTCATTCGTTTCTTCGACGATTGCAAAATTTCTGAACGTTCGGAAGAAAAGGCAAGAGA 60 consensus_1570#1 GCACACCACAACTCTCGACGCACGCAAG----CTGCTCGATTTTATTATTATACGATATA 56 ** ****** **** *** ** * * * * * * * * consensus_1570#0 GAGACGGTCGAAGAATTCGCAATTTCGAAGACCTCTTGACGAGAGATCGAGGAACAATCG 120 consensus_1570#1 ACGCTGATAAGTAAGATAAAAAA---GAAAA------AAAAAGACGAAGCAGAACAAATC 107 * * * * * ** *** * * *** * ****** consensus_1570#0 TGGCAAAGGAATTATTCGTGCGGCAACGACGCAGTGAAACAACGTACAACCTCGTTCTGC 180 consensus_1570#1 CGTTCGGTAGGTTGT-------GTAGCTTGTCGAGAGAACGACACGCACCCGC-TTCTCT 159 * ** * * * * * *** ** ** ** * **** consensus_1570#0 TACGGACGAATCCATATCCATATTATTTTCCTCGAGAAAAGCCAGCATCCT-TGACAAAT 239 consensus_1570#1 GACT--CGTAGCGCGATTAGCAAT-TTCGTTTCGAGTGATTCCTCTTTCTTCTGAAGGTC 216 ** ** * * ** * * ** ***** * ** ** * *** consensus_1570#0 GCTCGTATAATCTAATATCGTATAATAATAAAATCGAGCAGCTTGCGTGCGTCGAGAGTT 299 consensus_1570#1 GATTGAAGAGAAAAAGAAGAAAGAAAGAAAGAAAGGGGGAGAAAA-GCACGAAAAGAGGG 275 * * * * * ** * * ** * * ** * * ** * ** **** consensus_1570#0 GTGGTGTGCGCGAGATTCAAATCGCGAAATCAAAAAAAAAGAAAAGAAAAAAAAAGAAAA 359 consensus_1570#1 GAAAAACACAC-ATATATATAT-ATACACGCATATATGTACACGCAAAAAGAAAAGAGAA 333 * * * * ** * ** * ** * * * * **** ****** ** consensus_1570#0 AAAGAAAAAGAGAAAAAAAA 379 consensus_1570#1 ATTGAAAAGATAAAAAAAAA 353 * ***** ******** |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |