These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1629#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 442 fasta sequence [CAAGAGGACACCCAGTGTCGACGATCGCAATGAATCGAAAGGAAGTGAGAGGGAAACGGGGCATCCTCGACGATCGTAGAAGATGCCTCGGTTTACAAATTTTCAGCGTAATCTCGTGGCACGTAATTACCACGAATAATCGTTAAAGAGTCTGAGATTTAGCAAGGAATTATATATATACCCTCCCTCCTCCACTTTTTCTAACTTACCACCACGCGTTCCCCCCACTCCCATTACTCCCATCTCTTCTTCCCACCCACTCCCCCACCTCCACTCGGCGGTTACCTACCGAGTGGTTCGACACTTCACCTTCCTTCCTTCCTTTTTCTTTTCCTTCGTTACTCGTGACCTTAGTATCNNNTTATTTATTTAGAGTTCGAGCGAGTATAAACTTACCGCCGGATGTGGAAGGAATTAATTTAGGTATTCGCTCTTTTCACGT] [+] EMBL BI515637 [CAAGAGGACACCCAGTGTCGACGATCGCAATGAATCGAAAGGAAGTGAGAGGGAAACGGGGCATCCTCGACGATCGTAGAAGATGCCTCGGTTTACAAATTTTCAGCGTAATCTCGTGGCACGTAATTACCACGAATAATCGTTAAAGAGTCTGAGATTTAGCAAGGAATTATATATATACCCTCCCTCCTCCACTTTTTCTAACTTACCACCACGCGTTCCCCCCACTCCCATTACTCCCATCTCTTCTTCCCACCCACTCCCCCACCTCCACTCGGCGGTTACCTACCGAGTGGTTCGACACTTCACCTTCCTTCCTTCCTTTTTCTTTTCCTTCGTTACTCGTGACCTTAGTATCNNNTTATTTATTTAGAGTTCGAGCGAGTATAAACTTACCGCCGGATGTGGAAGGAATTAATTTAGGTATTCGCTCTTTTCACGT] consensusID : consensus_1629#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 368 fasta sequence [GAGAGAGAAACGGGGCATCCTCGACGATCGTAGAAGATGCCTCGGTTTATAAATTTTCAGCGTAATCTCGTGGCACGTAATTACCACGAATAATCGTTAAAGAGTCTGAGATTTAGCAAGGAATTATATATATAAATATATATATATATATATACATTACGTACGTGTACATGTATNNNNAGAGAGAGAGAGAGAGAGAGATCANNATGAAAGAAATTTTAATGAAAAAAAAATTCAAAAATAATATTAGAAATTTTTAGAAAATGGANAATGTTCTGATAACATGACAATTATCTGATAGAAATGATTTATTTGCAGAACTAAAATTTTCGGATGAAAGAAGAGGGAGAAAATACAAGAAAAATATA] [+] EMBL BI515012 [GAGAGAGAAACGGGGCATCCTCGACGATCGTAGAAGATGCCTCGGTTTATAAATTTTCAGCGTAATCTCGTGGCACGTAATTACCACGAATAATCGTTAAAGAGTCTGAGATTTAGCAAGGAATTATATATATAAATATATATATATATATATACATTACGTACGTGTACATGTATNNNNAGAGAGAGAGAGAGAGAGAGATCANNATGAAAGAAATTTTAATGAAAAAAAAATTCAAAAATAATATTAGAAATTTTTAGAAAATGGANAATGTTCTGATAACATGACAATTATCTGATAGAAATGATTTATTTGCAGAACTAAAATTTTCGGATGAAAGAAGAGGGAGAAAATACAAGAAAAATATA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1629#0 CAAGAGGACACCCAGTGTCGACGATCGCAATGAATCGAAAGGAAGTGAGAGGGAAACGGG 60 consensus_1629#1 ----------------------------------------------GAGAGAGAAACGGG 14 ***** ******** consensus_1629#0 GCATCCTCGACGATCGTAGAAGATGCCTCGGTTTACAAATTTTCAGCGTAATCTCGTGGC 120 consensus_1629#1 GCATCCTCGACGATCGTAGAAGATGCCTCGGTTTATAAATTTTCAGCGTAATCTCGTGGC 74 *********************************** ************************ consensus_1629#0 ACGTAATTACCACGAATAATCGTTAAAGAGTCTGAGATTTAGCAAGGAATTATATATATA 180 consensus_1629#1 ACGTAATTACCACGAATAATCGTTAAAGAGTCTGAGATTTAGCAAGGAATTATATATATA 134 ************************************************************ consensus_1629#0 CCCTCCCTCCTCCACTTTTTC-TAACTTACCACCACGCGTTCCCCCCACTCCCATTACTC 239 consensus_1629#1 AATATATATATATATATATACATTACGTACGTGTACATGTATNNNNAGAGAGAGAGAGAG 194 * * * * * * ** *** ** ** * consensus_1629#0 CCATCTCTTCTTCCCACCCACTCCCCCACCTCCACTCGGCGGTTACCTACCGAGTGGTTC 299 consensus_1629#1 AGAGAGATCANNATGAAAGA-------AATTTTAATGAAAAAAAAATTCAAAAATAATAT 247 * * * * * * * * * * * * * consensus_1629#0 GACACTTCACCTTCCTTCCTTCCTTTTTCTTTTCCTTCGTTACTCGTGACCTTAGTATCN 359 consensus_1629#1 TAGAAATTTTTAGAAAATGGANAATGTTCTGATAACATGACAATTAT----CTGATAG-A 302 * * * * **** * * * * * * ** consensus_1629#0 NNTTATTTATTTAGAGTTCGAGCGAGTATAAACTTACCGCCGGATGTGGAAGGAATTAAT 419 consensus_1629#1 AATGATTTATTTGCAG--------AACTAAAATTTTCGGATGAAAGAAGAGGGAGAAAAT 354 * ******** ** * *** ** * * * * * ** *** *** consensus_1629#0 TTAGGTATTCGCTCTTTTCACGT 442 consensus_1629#1 ACAAGAAAAATATA--------- 368 * * * * |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |