These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1667#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 527 fasta sequence [TTTATTATTAAACAATGAGACTAAAGCTATCGGAAAAAATATATGCATACATGTGAACGACGCTTAAGGGTCGTTTCTTTCAAGTCCTCAAGGTCATTGCTCGAATTTAACTTTGCAAATTGACTGTAAAAACTCACTGCGTTTACACTCGTAATCGAAGCATGCAGCGCCACGAACGAGCGACATTGTAAACGTCGATATCTTTATTATTATATCTATTATTATACAGCGTTTTAAAATCCGAAGAAGAGTATAAAGAAGTTTGTTGTCTATCGGGTTGATTATTTTGTAAGATATAAGATCAAATCTCGAGTTTCCATTATGTTCTTGGTGATGATGCGAATAGTCTGTTGATGTAGAGAGAATGCGTTGAACAACAACAGGTGTTTTATTTATGCTTTACACAATTGAACTCTCACTATTGAATGCCGAATTAATCTCGCATCGTTGAAATTGAACAAGATGTTCTAGTTATTCTACAGAATTATTTAATTTCTAATATTTCATCGATTTGCAAAAGTTGTTTT] [+] EMBL BI513585 [TTTATTATTAAACAATGAGACTAAAGCTATCGGAAAAAATATATGCATACATGTGAACGACGCTTAAGGGTCGTTTCTTTCAAGTCCTCAAGGTCATTGCTCGAATTTAACTTTGCAAATTGACTGTAAAAACTCACTGCGTTTACACTCGTAATCGAAGCATGCAGCGCCACGAACGAGCGACATTGTAAACGTCGATATCTTTATTATTATATCTATTATTATACAGCGTTTTAAAATCCGAAGAAGAGTATAAAGAAGTTTGTTGTCTATCGGGTTGATTATTTTGTAAGATATAAGATCAAATCTCGAGTTTCCATTATGTTCTTGGTGATGATGCGAATAGTCTGTTGATGTAGAGAGAATGCGTTGAACAACAACAGGTGTTTTATTTATGCTTTACACAATTGAACTCTCACTATTGAATGCCGAATTAATCTCGCATCGTTGAAATTGAACAAGATGTTCTAGTTATTCTACAGAATTATTTAATTTCTAATATTTCATCGATTTGCAAAAGTTGTTTT] consensusID : consensus_1667#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 527 fasta sequence [TGATAATAAACTTTTGTCGATAATTGCCTGTACAATAGCAAAACGTTGCAAATCTATTTAACATATAATCCCATGAACAGTCGCGCATAGAATAAATTCGATGCACTATGGAATATCGAAAATCCTCTCGATTAAGATTAAGATCGTATTACTTATCTTTTCCTCTTCCTTCAAATTCAAATTAATTTGCTTTTTCATTCTCTGTTAGATCCTCCGATAGACTCTCTTAGTGTCGAAACGAGCGTTCTCATAAGACAGGCAGAAACACACTCGCAAACTTATCTACTATGCACTGTAAACCGCACTCATTGGCGTTTAACAAGTGTAAACAACGAATAACACGTTTATTGGATTCCTATATATCGAATTATTTTGCAACTAAATATTTTGACACCGAGAGAGTCAAATAATCTTACTGAGATACTTATCTGTATCTGAGTATCACTTGTCGTTAAAACCTTTTTTGTTTATAAAAAAAACAACTTTTGCAAATCGATGAAATATTAGAAATTAAATAATTCTGTAGA] [+] EMBL BI513152 [TGATAATAAACTTTTGTCGATAATTGCCTGTACAATAGCAAAACGTTGCAAATCTATTTAACATATAATCCCATGAACAGTCGCGCATAGAATAAATTCGATGCACTATGGAATATCGAAAATCCTCTCGATTAAGATTAAGATCGTATTACTTATCTTTTCCTCTTCCTTCAAATTCAAATTAATTTGCTTTTTCATTCTCTGTTAGATCCTCCGATAGACTCTCTTAGTGTCGAAACGAGCGTTCTCATAAGACAGGCAGAAACACACTCGCAAACTTATCTACTATGCACTGTAAACCGCACTCATTGGCGTTTAACAAGTGTAAACAACGAATAACACGTTTATTGGATTCCTATATATCGAATTATTTTGCAACTAAATATTTTGACACCGAGAGAGTCAAATAATCTTACTGAGATACTTATCTGTATCTGAGTATCACTTGTCGTTAAAACCTTTTTTGTTTATAAAAAAAACAACTTTTGCAAATCGATGAAATATTAGAAATTAAATAATTCTGTAGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1667#0 TTTATTATTAAACAATGAGACTAAAGCTATCGGAAAAAATATATGCATACATGTGAACGA 60 consensus_1667#1 ---------------TGATAATAAACTTTTGTCGATAATTGCCTGTACAATAGCAAA--A 43 *** * **** * * * ** * ** * * * ** * consensus_1667#0 CGCTTAAGGGTCGTTTCTTTCAAGTCCTCAAGGTCATT---GCTCGAATTTAACTT--TG 115 consensus_1667#1 CGTTGCAAATCTATTTAACATATAATCCCATGAACAGTCGCGCATAGAATAAATTCGATG 103 ** * * *** * * ** * ** * ** * * ** * ** consensus_1667#0 CAA-ATTGACTGTAAAAACTCACTGCGTTTACACTCGTAATCGAAGCATGCAGCGCCACG 174 consensus_1667#1 CACTATGGAATATCGAAAATCCTCTCGATTAAGATTAAGATCGTATTACTTATCTTTTCC 163 ** ** ** * * *** ** ** *** * **** * * * * * consensus_1667#0 AACGAGCGACATTGTAAAC--GTCGATATCTTTATTATTATATCTATTATT--ATACAGC 230 consensus_1667#1 TCTTCCTTCAAATTCAAATTAATTTGCTTTTTCATTCTCTGTTAGATCCTCCGATAGACT 223 * * *** * * ** *** * * ** * *** * consensus_1667#0 GTTTTAAAATCCGAAGAAGAGTATAAAGAAGTTTGTTGTCTATCGGGTTGATTATTTTGT 290 consensus_1667#1 CTCTTAGTGTCGAAACGAGCGTTCTCATAAGACAGGCAGA-AACACACTCGCAAACTTAT 282 * *** ** ** ** ** * *** * * * * * ** * consensus_1667#0 AAGATATAAGATCAAATCTCGAGTTTCCATTATGTTCTTGGTGATGATG-CGAATAGTCT 349 consensus_1667#1 CTACTATGCACTGTAAACCGCACTCATTGGCGTTTAACAAGTGTAAACAACGAATAACAC 342 *** * ** * * * * * *** * ****** consensus_1667#0 GTTGATGTAGAGAGAATGCGTTGAACAACA--ACAGGTGTTTTATTTATGCTTTACACAA 407 consensus_1667#1 GTTTATTGGATTCCTATATATCGAATTATTTTGCAACTAAATATTTTGACACCGAGAGAG 402 *** ** ** * *** * ** * * *** * * * consensus_1667#0 TTGAACTCTCACTATTGAATGCCGAATTAATCTCGCATCGTTGAAATTGAACAAGATGTT 467 consensus_1667#1 TCAAATAATCTTACTGAGATACTTATCTGTATCTGAGTATCACTTGTCGTTAAAACCTTT 462 * ** ** * ** * * * * * * * ** ** consensus_1667#0 CTAGTTATTCTACAGAATTATTTAATTTCTAATATTTCATCGATTTGCAA--AAGTTGTT 525 consensus_1667#1 TTTGTTTATAAAAAAAACAACTT--TTGCAAATCGATGAAATATTAGAAATTAAATAATT 520 * *** * * * ** * ** ** * *** * * *** * ** ** * ** consensus_1667#0 TT----- 527 consensus_1667#1 CTGTAGA 527 * |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |