These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1717#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 512 fasta sequence [ATTATTGGTTATACCGAAAACATTAGCTGTTAATGCGGCACAAGATGCTACAGATCTTGTTGCTAAATTACGTGCTTATCATAATTCCAGTCAAACGAAAGCAGATCTTGCAGATTTAAAATGGGTTGGTCTGGATTTGCTTGAAGGTACTATTAAAGATAATAAAAAAGCTGGTGTATTGGAACCAGCTATTTCAAAAATAAAATCTCTGAAATTTGCCACAGAAGCAGCAATAACAATTCTTAGAATTGATGATATGATCAAATTAGATCCAGAACGATCAAAGGATAAATCATATCGCGATGCAATGGAATCTGGTGAATTGGAAGAATAATATTAAAATATATTATTTATCCTTTTTTCTTATAATTTGTTATACTGGAAAAATTAAATTATAATTTACTACTATTTTACAATTTAGCGATAAAAAATCACTAACATTTATGTTAATTTGTTCTCATGAATGAATTTGCTAATAATAAATAAAATAAAGCTTTTACATAGAAAAAAAA] [+] EMBL BI509223 [ATTATTGGTTATACCGAAAACATTAGCTGTTAATGCGGCACAAGATGCTACAGATCTTGTTGCTAAATTACGTGCTTATCATAATTCCAGTCAAACGAAAGCAGATCTTGCAGATTTAAAATGGGTTGGTCTGGATTTGCTTGAAGGTACTATTAAAGATAATAAAAAAGCTGGTGTATTGGAACCAGCTATTTCAAAAATAAAATCTCTGAAATTTGCCACAGAAGCAGCAATAACAATTCTTAGAATTGATGATATGATCAAATTAGATCCAGAACGATCAAAGGATAAATCATATCGCGATGCAATGGAATCTGGTGAATTGGAAGAATAATATTAAAATATATTATTTATCCTTTTTTCTTATAATTTGTTATACTGGAAAAATTAAATTATAATTTACTACTATTTTACAATTTAGCGATAAAAAATCACTAACATTTATGTTAATTTGTTCTCATGAATGAATTTGCTAATAATAAATAAAATAAAGCTTTTACATAGAAAAAAAA] consensusID : consensus_1717#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 445 fasta sequence [AATATGGAAGGAGAGGAAAGTTTTGATTCAAGTTTTCTTGGAGAAGCTGCTGAAGTAGTACAAGAAATGATATGTGATGATGAGCTCATTCTTATTAAAGGACCAAAAGCAAGAACAGCAAGTTCCATGATATTAAGAGGACCAAATGATTATTATTGTGATGAAATGGAACGATCTGTGCATGATGCATTATGTGCAGTAAAACGAGTTTTAGAGAGTAAAAGTGTGGTTGCAGGAGGTGGTTGTGTTGAAGCAGCACTTTCAATTTATTTAGAAAATTTTGCTACATCACTTAGTTCTCGAGAACAATTAGCTATTGCTGAATTTGCAAGATCATTATTGGTTATACCGAAAACATTAGCTGTTAATGCGGCACAAGATGCTACAGATCTTGTTGCTAAATTACGTGCTTATCATAATTCCAGTCAAACGAAAGCAGATCTTG] [+] EMBL BI515534 [AATATGGAAGGAGAGGAAAGTTTTGATTCAAGTTTTCTTGGAGAAGCTGCTGAAGTAGTACAAGAAATGATATGTGATGATGAGCTCATTCTTATTAAAGGACCAAAAGCAAGAACAGCAAGTTCCATGATATTAAGAGGACCAAATGATTATTATTGTGATGAAATGGAACGATCTGTGCATGATGCATTATGTGCAGTAAAACGAGTTTTAGAGAGTAAAAGTGTGGTTGCAGGAGGTGGTTGTGTTGAAGCAGCACTTTCAATTTATTTAGAAAATTTTGCTACATCACTTAGTTCTCGAGAACAATTAGCTATTGCTGAATTTGCAAGATCATTATTGGTTATACCGAAAACATTAGCTGTTAATGCGGCACAAGATGCTACAGATCTTGTTGCTAAATTACGTGCTTATCATAATTCCAGTCAAACGAAAGCAGATCTTG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1717#0 ATTATTGGTTATACCGAAAACATTAGCTGTTAATGCGGCACAAGATGCTACAGATCTTGT 60 consensus_1717#1 AATAT-GGAAGGAGAGGAAAGTTTTGATTCAAGTTTTCTTGGAGAAGCTGCTGAAGTAGT 59 * *** ** * * *** ** * * * * *** *** * ** * ** consensus_1717#0 -TGCTAAATTACGTGCTTATCATAATTCCAGTCAAACGAAAGCAGATCTTGCAGATTTAA 119 consensus_1717#1 ACAAGAAATGATATG-TGATGATGAGCTCATTCTTATTAAAGGAC------CAAAAGCAA 112 **** * ** * ** ** * ** ** * **** * ** * ** consensus_1717#0 AATGGGTTGGTCTGGATTTGCTTGAAGGTACTATTAAAGATAATAAAAAAGCTGGTGTAT 179 consensus_1717#1 GAACAGCAAGTTCCATGATATTAAGAGGACC------AAATGATTATTATTGTGATGAAA 166 * * ** * * *** * * ** ** * * ** ** * consensus_1717#0 TGGAACCAGCTATTTCAAAAATAAAATCTCTGAAATTTGCCACAGAAGCAGCAATAACAA 239 consensus_1717#1 TGGAACGATCTGTGC--ATGATGCATTATGTGCAGTAAAACG-AGTTTTAGAGAGTAAAA 223 ****** * ** * * ** * * * ** * * * ** ** * * ** consensus_1717#0 TTCTTAGAATTGATGATATGATCAAATTAGATCCAGAACGATCAAAGGATAAATCATATC 299 consensus_1717#1 GTGT--GGTTGCAGGAGGTGGTTGTGTTGAAGC-AGCACTTTCAATTTATTTAGAAAATT 280 * * * * * ** ** * ** * * ** ** **** ** * * ** consensus_1717#0 GCGATGCAATGGAATCTGGTGAATTGGAAGAATAATATTAAAATATATTATTTATCCTTT 359 consensus_1717#1 TTGCTACATC---ACTTAGT---TCTCGAGAACAATT-----AGCTATTGCTGAATTTGC 329 * * ** * * ** * **** *** * **** * * * consensus_1717#0 TTTCTTATAATTTGTTATACTGGAAAAATTAAATTATAATTTACTACTA--TTTTACAAT 417 consensus_1717#1 AAGATCATTATTGGTTATACCGAAAACATTAGCTGTTAATGCGGCACAAGATGCTACAGA 389 * ** *** ******* * *** **** * **** ** * * **** consensus_1717#0 TTAGCGATAAAAAATCACTAACATTTATGTTAATTT-GTTCTCATGAATGAATTTGCTAA 476 consensus_1717#1 TCT-TGTTGCTAAATTAC--GTGCTTATCATAATTCCAGTCAAACGAAAGCAGATCTTG- 445 * * * **** ** **** ***** ** * *** * * * * consensus_1717#0 TAATAAATAAAATAAAGCTTTTACATAGAAAAAAAA 512 consensus_1717#1 ------------------------------------ |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |