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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_172#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 608 fasta sequence
[GCATATATATACACACACATACACATATATAGATTACACATATACGTATATACAATTGTCATACCGCTGCAGCTGTTCTCGAATAACGAACTCTTTGCCTGCCGATTTTTCGTGTTCCCTTTTGTTCGCGTATTTGAAAAAAGAACCAGCCAGTGTGTTCTTCGTTCCCCTTAGCTTCTTCGTTCGCGCTTAAAAATAATTCTGCCTTCCTTAATTAAAATTTCTTGTCTTGCATTTTTTTTTAAATTTTTCAACATAAGTATTGAAAAGTATTTTAAATTCTGTATTTAATTGTTCTTTAATATACTTTCAAATAAAGTTAAAAAGTTCCATTTGATTGCACTTTAGAGATATGAAATTTATATTATTCTAAGAATATATTTTTTTCAAGTATATTAGAAATAAGATATTTTAATTGAGGAGGTAAGATTAATTATTCTTGGATCTTCTTTGTAGATATATTTGTACGGATAGATAGATTTCCTTTCTTTTCTAATGTTTTATGCGGAAAGAGAGTGATAGATTTTTGTGCAAAAGTGGAGTAGGATTTGTACGTAAATAGTGGCNTCGACAGGGAAAGACAGGAAAAATCGGCATCGAGCGAGGGA]
[+] EMBL BI507399 [GCATATATATACACACACATACACATATATAGATTACACATATACGTATATACAATTGTCATACCGCTGCAGCTGTTCTCGAATAACGAACTCTTTGCCTGCCGATTTTTCGTGTTCCCTTTTGTTCGCGTATTTGAAAAAAGAACCAGCCAGTGTGTTCTTCGTTCCCCTTAGCTTCTTCGTTCGCGCTTAAAAATAATTCTGCCTTCCTTAATTAAAATTTCTTGTCTTGCATTTTTTTTTAAATTTTTCAACATAAGTATTGAAAAGTATTTTAAATTCTGTATTTAATTGTTCTTTAATATACTTTCAAATAAAGTTAAAAAGTTCCATTTGATTGCACTTTAGAGATATGAAATTTATATTATTCTAAGAATATATTTTTTTCAAGTATATTAGAAATAAGATATTTTAATTGAGGAGGTAAGATTAATTATTCTTGGATCTTCTTTGTAGATATATTTGTACGGATAGATAGATTTCCTTTCTTTTCTAATGTTTTATGCGGAAAGAGAGTGATAGATTTTTGTGCAAAAGTGGAGTAGGATTTGTACGTAAATAGTGGCNTCGACAGGGAAAGACAGGAAAAATCGGCATCGAGCGAGGGA]
consensusID : consensus_172#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 603 fasta sequence
[AAGAGGAAGAGATAAAATCGCGGACTGATTAATTACGTGTGCCAAATCGTCGTTACACAGACACATACGTACGTATATACATGCATATATATATACACACACATACACATATATAGATTACACATATACGTATATACAATTGTCATACCGCTGCAGCTGTTCTCGAATAGCGAACTCTTTGCCTGCCGATTTTTCGTGTTCCCTTTTGTTCGCGTATTTGAAAAAAGAACCAGCCAGTGTGTTCTTCGTTCCCTTTAGCTTCTTCGTTCGCGCTTAAAAATAATTCTGCCTTCCTTAATTAAAATTTCTTGTCTTGCATTTTTTTTTGCAAATTTTCCAACATAAGTATTGAAGTATTTTAAATTCTGTTTAATTGTTTTTTCAAATAAAGTTAAAAAGTTTTGATTGCTCTTTAGAGATATGAAATTTATATTATTCTAAGAATATATCTTCTTCAAGCATATTAGAAATGCTTGATAAGATATTTTAATTGAGGAGGTAAGATTAATTATTCTTGGATCTTGTTTGTAGATATATTTGTACGGATAGATAGATTTCCTTTCTTTTCTAATGTTTTATGCGGAAAGAGAGTGATAGATTTTT]
[+] EMBL BI506247 [AAGAGGAAGAGATAAAATCGCGGACTGATTAATTACGTGTGCCAAATCGTCGTTACACAGACACATACGTACGTATATACATGCATATATATATACACACACATACACATATATAGATTACACATATACGTATATACAATTGTCATACCGCTGCAGCTGTTCTCGAATAGCGAACTCTTTGCCTGCCGATTTTTCGTGTTCCCTTTTGTTCGCGTATTTGAAAAAAGAACCAGCCAGTGTGTTCTTCGTTCCCTTTAGCTTCTTCGTTCGCGCTTAAAAATAATTCTGCCTTCCTTAATTAAAATTTCTTGTCTTGCATTTTTTTTTGCAAATTTTCCAACATAAGTATTGAAGTATTTTAAATTCTGTTTAATTGTTTTTTCAAATAAAGTTAAAAAGTTTTGATTGCTCTTTAGAGATATGAAATTTATATTATTCTAAGAATATATCTTCTTCAAGCATATTAGAAATGCTTGATA ]
[+] EMBL BI505030 [ TACGTGTGCCAAATCGTCGTTACACAGACACATACGTACGTATATACATGCATATATATATACACACACATACACATATATAGATTACACATATACGTATATACAATTGTCATACCGCTGCAGCTGTTCTCGAATAGCGAACTCTTTGCCTGCCGATTTTTCGTGTTCCCTTTTGTTCGCGTATTTGAAAAAAGAACCAGCCAGTGTGTTCTTCGTTCCCTTTAGCTTCTTCGTTCGCGCTTAAAAATAATTCTGCCTTCCTTAATTAAAATTTCTTGTCTTGCATTTTTTTTTGCAAATTTTCCAACATAAGTATTGAAGTATTTTAAATTCTGTTTAATTGTTTTTTCAAATAAAGTTAAAAAGTTTTGATTGCTCTTTAGAGATATGAAATTTATATTATTCTAAGAATATATCTTCTTCAAGCATATTAGAAATGCTTGATA ]
[+] EMBL BI504066 [ TGCCAAATCGTCGTTACACAGACACATACGTACGTATATACATGCATATATATATACACACACATACACATATATAGATTACACATATACGTATATACAATTGTCATACCGCTGCAGCTGTTCTCGAATAGCGAACTCTTTGCCTGCCGATTTTTCGTGTTCCCTTTTGTTCGCGTATTTGAAAAAAAAAaa ]
[+] EMBL BI511821 [ TACGTACGTATATACATGCATATATATATACACACACATACACATATATAGATTACACATATACGTATATACAATTGTCATACCGCTGCAGCTGTTCTCGAATAGCGAACTCTTTGCCTGCCGATTTTTCGTGTTCCCTTTTGTTCGCGTATTTGAAAAAAGAACCAGCCAGTGTGTTCTTCGTTCCCTTTAGCTTCTTCGTTCGCGCTTAAAAATAATTCTGCCTTCCTTAATTAAAATTTCTTGTCTTGCATTTTTTTTTGCAAATTTTCCAACATAAGTATTGAAGTATTTTAAATTCTGTTTAATTGTTTTTTCAAATAAAGTTAAAAAGTTTTGATTGCTCTTTAGAGATATGAAATTTATATTATTCTAAGAATATATCTTCTTCAAGCATATTAGAAATGCTTGATAAGATATTTTAATTGAGGAGGTAAGATTAATTATTCTTGGATCTTGTTTGTAGATATATTTGTACGGATAGATAGATTTCCTTTCTTTTCTAATGTTTTATGCGGAAAGAGAGTGATAGATTTTT]
[+] EMBL BI511283 [ CATACCGCTGCAGCTGTTCTCGAATAGCGAACTCTTTGCCTGCCGATTTTTCGTGTTCCCTTTTGTTCGCGTATTTGAAAAAAGAACCAGCCAGTGTGTTCTTCGTTCCCCTTAGCTTCTCCGTTCGCGCTTAAAAATAATTCTGCCTTCCTTAATTAAAATTTCTTGTCTTGCATTTTTTTTTGCAAATTTTCCAACATAAGTATTGAAGTATTTTAAATTCTGTTTAATTGTTTTTTCAAATAAAGTTAAAAAGTTTTGATTGCTCTTTAGAGATATGAAATTTATATTATTCTAAGAATATATCT ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_172#0 ------------------------------------------------------------
consensus_172#1 AAGAGGAAGAGATAAAATCGCGGACTGATTAATTACGTGTGCCAAATCGTCGTTACACAG 60
consensus_172#0 ------------------------GCATATATATACACACACATACACATATATAGATTA 36
consensus_172#1 ACACATACGTACGTATATACATGCATATATATATACACACACATACACATATATAGATTA 120
**********************************
consensus_172#0 CACATATACGTATATACAATTGTCATACCGCTGCAGCTGTTCTCGAATAACGAACTCTTT 96
consensus_172#1 CACATATACGTATATACAATTGTCATACCGCTGCAGCTGTTCTCGAATAGCGAACTCTTT 180
************************************************* **********
consensus_172#0 GCCTGCCGATTTTTCGTGTTCCCTTTTGTTCGCGTATTTGAAAAAAGAACCAGCCAGTGT 156
consensus_172#1 GCCTGCCGATTTTTCGTGTTCCCTTTTGTTCGCGTATTTGAAAAAAGAACCAGCCAGTGT 240
************************************************************
consensus_172#0 GTTCTTCGTTCCCCTTAGCTTCTTCGTTCGCGCTTAAAAATAATTCTGCCTTCCTTAATT 216
consensus_172#1 GTTCTTCGTTCCCTTTAGCTTCTTCGTTCGCGCTTAAAAATAATTCTGCCTTCCTTAATT 300
************* **********************************************
consensus_172#0 AAAATTTCTTGTCTTGCATTTTTTTTT--AAATTTTTCAACATAAGTATTGAAAAGTATT 274
consensus_172#1 AAAATTTCTTGTCTTGCATTTTTTTTTGCAAATTTTCCAACATAAGTATTGAA--GTATT 358
*************************** ******* **************** *****
consensus_172#0 TTAAATTCTGTATTTAATTGTTCTTTAATATACTTTCAAATAAAGTTAAAAAGTTCCATT 334
consensus_172#1 TTAAATTCTG--TTTAATTGTTTTTT----------CAAATAAAGTTAAAAAGT----TT 402
********** ********** *** ****************** **
consensus_172#0 TGATTGCACTTTAGAGATATGAAATTTATATTATTCTAAGAATATATTTTTTTCAAGTAT 394
consensus_172#1 TGATTGCTCTTTAGAGATATGAAATTTATATTATTCTAAGAATATATCTTCTTCAAGCAT 462
******* *************************************** ** ****** **
consensus_172#0 ATTAGAAAT-------AAGATATTTTAATTGAGGAGGTAAGATTAATTATTCTTGGATCT 447
consensus_172#1 ATTAGAAATGCTTGATAAGATATTTTAATTGAGGAGGTAAGATTAATTATTCTTGGATCT 522
********* ********************************************
consensus_172#0 TCTTTGTAGATATATTTGTACGGATAGATAGATTTCCTTTCTTTTCTAATGTTTTATGCG 507
consensus_172#1 TGTTTGTAGATATATTTGTACGGATAGATAGATTTCCTTTCTTTTCTAATGTTTTATGCG 582
* **********************************************************
consensus_172#0 GAAAGAGAGTGATAGATTTTTGTGCAAAAGTGGAGTAGGATTTGTACGTAAATAGTGGCN 567
consensus_172#1 GAAAGAGAGTGATAGATTTTT--------------------------------------- 603
*********************
consensus_172#0 TCGACAGGGAAAGACAGGAAAAATCGGCATCGAGCGAGGGA 608
consensus_172#1 -----------------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |