These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1746#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 520 fasta sequence [TACGTGTGAAGAGGTGCAAGTACACGTGTGTGCGTGCCACACGTATACTTGATGGTGTAACGATGCATATGAATTGTATAAATATATGTATGTATATCTAGATCCAAGACGAGTATATATATATATACCAATAAGGGAATCGTTTTGTACAAGTTATACAAACGTGTGATAAATATTCATACTTGGTATTTTGGAACGTTGATTTTAATTTGAATCGAGTTAACATCGATACGAAAATATTTCGTTAAGAAAAAAAAAAATGGTTCTTTTATTCCTCTTTGAAAAATTCTCATTTTTATCGTTCCAAAATAGTATGAATATTCATACTTGGTATTTTGGAACGTTGATTTTAACTCGAATCGAGTTAACATCGATATATTTCGAGGATTTTCGTTAAGAAAAAAAAATGNNNCTTTTTCTTTTCTTTCTCTTTGAAAAATTTTCATTTTTGTCGTTCCAAAATGGTATGAATATTCATACTTGGTATTTTGGAACGTTGATTCTAACTCGAATCGAGTTA] [+] EMBL BI508667 [TACGTGTGAAGAGGTGCAAGTACACGTGTGTGCGTGCCACACGTATACTTGATGGTGTAACGATGCATATGAATTGTATAAATATATGTATGTATATCTAGATCCAAGACGAGTATATATATATATACCAATAAGGGAATCGTTTTGTACAAGTTATACAAACGTGTGATAAATATTCATACTTGGTATTTTGGAACGTTGATTTTAATTTGAATCGAGTTAACATCGATACGAAAATATTTCGTTAAGAAAAAAAAAAATGGTTCTTTTATTCCTCTTTGAAAAATTCTCATTTTTATCGTTCCAAAATAGTATGAATATTCATACTTGGTATTTTGGAACGTTGATTTTAACTCGAATCGAGTTAACATCGATATATTTCGAGGATTTTCGTTAAGAAAAAAAAATGNNNCTTTTTCTTTTCTTTCTCTTTGAAAAATTTTCATTTTTGTCGTTCCAAAATGGTATGAATATTCATACTTGGTATTTTGGAACGTTGATTCTAACTCGAATCGAGTTA] consensusID : consensus_1746#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 435 fasta sequence [TTGGAACGTTGATTTTAACTCGAATCGAGTTAACATCGATATATTTCGAGGATTTTCGTTAAGAAAAAAAAAATGGTTCTTTTTTTTTTTCTTCCTCTTTGAAAAATTCTCATTTTTGTCGTTCCAAAATGGTATGAATTTGGACACGGGTTGCGTGTTCACGCGTTTCGCCGGTTTCTCGTCGATGGAATAGAGGCGCTACAAAGTGATCAGCAATAAACTAAACGCACAATAATCATNNNTAGGCGTTGTTCGTCAGTGGACCTAAACAGTTGTTGTACACGATATACCCGGTGAACGATATTATAGCTCCCTCCTCTGCATTTGTATTTTCACATCCAACGAGAGAAAGATCGAATTCAGAATTTTTTTTAAACGACACACCAATATTGCTACAAAAAGATAAACAAAAAGACTCGTAGAAAAAAAAAAAAA] [-] EMBL BI514954 [TTGGAACGTTGATTTTAACTCGAATCGAGTTAACATCGATATATTTCGAGGATTTTCGTTAAGAAAAAAAAAATGGTTCTTTTTTTTTTTCTTCCTCTTTGAAAAATTCTCATTTTTGTCGTTCCAAAATGGTATGAATTTGGACACGGGTTGCGTGTTCACGCGTTTCGCCGGTTTCTCGTCGATGGAATAGAGGCGCTACAAAGTGATCAGCAATAAACTAAACGCACAATAATCATNNNTAGGCGTTGTTCGTCAGTGGACCTAAACAGTTGTTGTACACGATATACCCGGTGAACGATATTATAGCTCCCTCCTCTGCATTTGTATTTTCACATCCAACGAGAGAAAGATCGAATTCAGAATTTTTTTTAAACGACACACCAATATTGCTACAAAAAGATAAACAAAAAGACTCGTAGAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1746#0 TACGTGTGAAGAGGTGCAAGTACACGTGTGTGCGTGCCACACGTATACTTGATGGTGTAA 60 consensus_1746#1 ------------------------------------------------------TTGGAA 6 ** ** consensus_1746#0 CGATGCATATGAATTGTATAAATATATGTATGTATATCTAGATCCAAGACGAGTATATAT 120 consensus_1746#1 CGTTGATTTTAACTCGAATCGAGTTA-------ACATC--GATATATTTCGAGGATTTTC 57 ** ** * * * * * ** * ** * *** *** * **** ** * consensus_1746#0 ATATATACCAATAAGGGAATCGTTTTGTACAAGTTATACAAACGTGTGATAAATATTCAT 180 consensus_1746#1 GT---TAAGAAAAAAAAAATGGTTCTTTTTTT-TTTTCTTCCTCTTTGAAAAATTCTCAT 113 * ** ** ** *** *** * * ** * * *** **** **** consensus_1746#0 ACTTGGTATTTTGGAACGTTG---ATTTTAATTTGAATCGAGTTAACAT-CGATACGAAA 236 consensus_1746#1 TTTTGTCGTTCCAAAATGGTATGAATTTGGACACGGGTTGCGTGTTCACGCGTTTCGCCG 173 *** ** ** * * **** * * * * ** ** ** * ** consensus_1746#0 ATATTTCGTTAAGAAAAAAAAAAATGGTTCTTTTATTCCTCTTTGAAAAATTCTCATTTT 296 consensus_1746#1 GTTTCTCGTCGATGGAATAGAGGCGCTACAAAGTGATCAGCAATAAACTAAACGCACAAT 233 * * **** * ** * * * ** * * ** * * ** * consensus_1746#0 TATCGTTCCAAAATAGTATGAATATTCATACTTGGTATTTTGGAACGTTGATTTTAACTC 356 consensus_1746#1 AATCATNNNTAGGCGTTGTTCGTCAGTGGACCTAAACAGTTGTTGTACACGATATACCCG 293 *** * * * * * ** * *** * ** * consensus_1746#0 G-AATCGAGTTAACATCGATATATTTCGAGGATTTTCGTTAAGAAAAAAAAATGNNNCTT 415 consensus_1746#1 GTGAACGATATTATAGCTCCCTCCTCTGCATTTGTATTTTCACATCCAACGAGAGAAAGA 353 * * *** * * * * * * * * * ** * * ** * consensus_1746#0 TTTCTTTTCTTTCTCTTTGAAAAATTTTCATTTTTGTCGTTCCAAAATGGTATGAATATT 475 consensus_1746#1 TCGAATTCAGAATTTTTTTTAAACGACACACCAATATTGCTACAAAAAGATAAACAAAAA 413 * ** * *** *** ** * * * * ***** * ** * * consensus_1746#0 CATACTTGGTATTTTGGAACGTTGATTCTAACTCGAATCGAGTTA 520 consensus_1746#1 GACTCGTAGAAAAAAAAAAAAA----------------------- 435 * * * * * ** |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |