These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1764#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 523 fasta sequence [GTTAAACAAAATTTTAAACAACATTTAATAGAACCCGATAAAGAACGTGTTCAGCAAATTATGGAAAAAGCAATGCAAGATGCAGAATGGATAGTTAATAAGTACACTAAACCAAAAGGGACAAAGTAATAAACATGCAAAGATATTATCACCATTGTAGATACATTGTGTAATTTATTCTTTAGTAAAGGAAGAATTTGTAATTATTCTATTCAAGACATGGATTTCAAAACCATAATAAATGATCAAAATGAAATTAGTGCATCGCAATTTTTGAAAGCTATTGATATATGGTGTCGTAATCCTCAAATTATAAACCGTAGAATTCTAGCATCTATTGAAATATTGAATATCGAAATTAATTATGATATTTTTAAAATTTCCAATTATATTAATACTTTGGATGTTTCAATCTTAGGTATAAATCACCAAAAAGATGATATTGATAATAGAACGTTATTGGATGCTTTGCGCATTTTTGATCAAGTGGCTATTACAACAAATATGGAAAAAATCCATTTAT] [+] EMBL BI513020 [GTTAAACAAAATTTTAAACAACATTTAATAGAACCCGATAAAGAACGTGTTCAGCAAATTATGGAAAAAGCAATGCAAGATGCAGAATGGATAGTTAATAAGTACACTAAACCAAAAGGGACAAAGTAATAAACATGCAAAGATATTATCACCATTGTAGATACATTGTGTAATTTATTCTTTAGTAAAGGAAGAATTTGTAATTATTCTATTCAAGACATGGATTTCAAAACCATAATAAATGATCAAAATGAAATTAGTGCATCGCAATTTTTGAAAGCTATTGATATATGGTGTCGTAATCCTCAAATTATAAACCGTAGAATTCTAGCATCTATTGAAATATTGAATATCGAAATTAATTATGATATTTTTAAAATTTCCAATTATATTAATACTTTGGATGTTTCAATCTTAGGTATAAATCACCAAAAAGATGATATTGATAATAGAACGTTATTGGATGCTTTGCGCATTTTTGATCAAGTGGCTATTACAACAAATATGGAAAAAATCCATTTAT] consensusID : consensus_1764#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 487 fasta sequence [GGATCTTTTCATTCGACCGATAATCACGCGTTCGTTTGTTCGTTTATATAATTATGCTTTCGGTTAACGAGCGAGAAAAAGATAAATCATCATTCGTCGTATATATTGACATCGATATTCGAATAATTTTTTTTCGTCTAAATCCGTCGATTATCCATTTTGACAGAGTGTTCGAAAGATTTAAACAAGCAAGCGCATAGTAACAAGAGTGTGAAAAGTGTGGTTAAAACGCGGATGAGAAAAACATCGAGGAAAAGAAAGGAGAGCTATTTGAACATGTCTTTCATCGTTTCTACATTAAGATGGCTAGTGCAAGATTACGAGAATCTGCTTTAAAATCGCCGAGACAGTTGTATAAATTTTTATTGCGAGAATGCGAAAGATTGCCAAAGGAAGCGCAAGGATTTTACAGACATTCGGTTAAACAAAATTTTAAACAACATTTAATAGAACCCGATAAGGAACGTGTTCAGCAAATTATGGAAAA] [+] EMBL BI511907 [GGATCTTTTCATTCGACCGATAATCACGCGTTCGTTTGTTCGTTTATATAATTATGCTTTCGGTTAACGAGCGAGAAAAAGATAAATCATCATTCGTCGTATATATTGACATCGATATTCGAATAATTTTTTTTCGTCTAAATCCGTCGATTATCCATTTTGACAGAGTGTTCGAAAGATTTAAACAAGCAAGCGCATAGTAACAAGAGTGTGAAAAGTGTGGTTAAAACGCGGATGAGAAAAACATCGAGGAAAAGAAAGGAGAGCTATTTGAACATGTCTTTCATCGTTTCTACATTAAGATGGCTAGTGCAAGATTACGAGAATCTGCTTTAAAATCGCCGAGACAGTTGTATAAATTTTTATTGCGAGAATGCGAAAGATTGCCAAAGGAAGCGCAAGGATTTTACAGACATTCGGTTAAACAAAATTTTAAACAACATTTAATAGAACCCGATAAGGAACGTGTTCAGCAAATTATGGAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1764#0 GTTAAACAAAATTTTAAACAACATTTAATAGAACCCGATAAAGAACGTGTTCAGCAAATT 60 consensus_1764#1 -----------------GGATCTTTTCATTCGACC-GATAATCA-CGCGTTCGTTTGTTC 41 * * *** ** *** ***** * ** **** * consensus_1764#0 ATGGAAAAAGCAATGCAAGATGCAGAATGGATAGTTAATAAGTACACTAAACCAAAAGGG 120 consensus_1764#1 GTTTATATAATTATGCTTT-CGGTTAACGAGCGAGAAAAAGATAAATCATCATTCGTCGT 100 * * * * **** * ** * ** * ** * * * consensus_1764#0 ACAAAGTAATA--AACATGCAAAGATATTATCACCATTGTAGATACATTGTGTAATTTAT 178 consensus_1764#1 ATATATTGACATCGATATTCGAATAATTTTTTTTCGTC-TAAATCCGTCG-ATTATCCAT 158 * * * * * * * ** * ** * ** * * * ** ** * * * * ** ** consensus_1764#0 TCTTT---AGTAAAGGAAGAATTTG--TAATTATTCTATTCAAGACATGGATTTCAAAAC 233 consensus_1764#1 TTTGACAGAGTGTTCGAAAGATTTAAACAAGCAAGCGCATAGTAACAAGAGTGTGAAAAG 218 * * *** *** **** ** * * * *** * * * **** consensus_1764#0 CATAATAAATGATCAAA-ATGAAATTAGTGCATCGCAATTTTTGAAAGCTATTGATATAT 292 consensus_1764#1 TGTGGTTAAAACGCGGATGAGAAAAACATCGAGGAAAAGAAAGGAGAGCTATTTGAACAT 278 * * ** * * **** * * ** ** ******* * ** consensus_1764#0 GG-TGTCGTAATCCTCAAATTATAAACCGTAGAATTCTAGCATCTATTGAAATATTGAAT 351 consensus_1764#1 GTCTTTCATCGTTTCTACATTA--AGATGGCTAGTGCAAG-----ATTACGAGAATCTGC 331 * * ** * * * **** * * * * * ** *** * * * consensus_1764#0 ATCGAAATTAATTATGATATTTTTAAAATTTCCAATTATATTAATACTTTGGATGTTTCA 411 consensus_1764#1 TTTAAAATCG-CCGAGACAGTTGTATAAATTTTTATTGCGAGAATGCGAAAGATTGCCAA 390 * **** ** * ** ** ** ** *** *** * *** * consensus_1764#0 ATCTTAGGTATAAATCACCAAAAAGATGATATTGATAATAGAACGTTATTGGATGCTTTG 471 consensus_1764#1 AGGAAGCGCAAGGATT-TTACAGACATTCGGTTAA--ACAAAATTTTAAACAACATTTAA 447 * * * ** * * * ** ** * * * ** *** * ** consensus_1764#0 CGCATTTTTGATCAAGTGGCTATTACAACAAAT-ATGGAAAAAATCCATTTAT 523 consensus_1764#1 TAGAACCC-GATAAGGAACGTGTT-CAGCAAATTATGGAAAA----------- 487 * *** * * * ** ** ***** ******** |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |