These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1894#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 597 fasta sequence [ACATGAGCATTTTAAATACTTGTGATATTGTGGTCGATGTTGGTGAAGAATATAATCCTTGCAAGCATCGTTATGACCATCATATGAGATATAAGATCGTAACAGATTTATCTTCTCGTGTTAAGTTTTTAAATCCACCATGGAATAGCAAAGATCTTAATCCTAATACTCAATTTTTAAAAGCAATGGAATTAACTGGCCAAGATTTTGTCCAACATATAAATTATGCAGCAAATGTTTGGTTACCAGCTAGATCTATCGTAGAAGAAGCTGTTGCAAAACGCTTTGAAGTTGATCCTAGCGGAGAAATTATAGAATTATCACAGTGTGTACCATGGTTTCAGCATCTTTTTGCAATAGAAAAAGAACAAAATATAAAACCTTTATTGAAATATGTGATTTTTAAAGATGATACTTATAGAATTAGATGCGTACCTGTGAAGCCTGATAGTTTTATATGCAGGTTATTTTTACCAGAATCTTGGGAAGGTTTAAAAAATGAAGCTCTGGTAAATGTCTGCGGAATCGAAGGTGCTACTTTTGTACATTCTGGTCGATTTATTGGCGGAAATCGAATGAGAGAAGGAATATTAATGA] [+] EMBL BI508093 [ACATGAGCATTTTAAATACTTGTGATATTGTGGTCGATGTTGGTGAAGAATATAATCCTTGCAAGCATCGTTATGACCATCATATGAGATATAAGATCGTAACAGATTTATCTTCTCGTGTTAAGTTTTTAAATCCACCATGGAATAGCAAAGATCTTAATCCTAATACTCAATTTTTAAAAGCAATGGAATTAACTGGCCAAGATTTTGTCCAACATATAAATTATGCAGCAAATGTTTGGTTACCAGCTAGATCTATCGTAGAAGAAGCTGTTGCAAAACGCTTTGAAGTTGATCCTAGCGGAGAAATTATAGAATTATCACAGTGTGTACCATGGTTTCAGCATCTTTTTGCAATAGAAAAAGAACAAAATATAAAACCTTTATTGAAATATGTGATTTTTAAAGATGATACTTATAGAATTAGATGCGTACCTGTGAAGCCTGATAGTTTTATATGCAGGTTATTTTTACCAGAATCTTGGGAAGGTTTAAAAAATGAAGCTCTGGTAAATGTCTGCGGAATCGAAGGTGCTACTTTTGTACATTCTGGTCGATTTATTGGCGGAAATCGAATGAGAGAAGGAATATTAATGA] consensusID : consensus_1894#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 554 fasta sequence [TACTTGTGATATTGTGGTCGATGTTGGTGAAGAATATAATCCTTGCAAGCATCGTTATGACCATCATATGAGAGATTTTAATGAATCTGTAAGTACGATTATTAAGAAACCAGGTCATGATTGGAAAACAAAACTAAGTAGTGCTGGTTTAATATATTGTCATTTTGGTCATGAAATTATCAAGGAATTAGTTCCACAAGCAAGCGATGCTGACATAGAAATAATTTTTAAACATATTTATAATACATTCATTCAAGAAATTGATAGTATAGATAATGGAATTTCTATATGTAGTGAAAATACTAAATATCAGATCGTAACAGATTTATCTTCTCGTGTTAAGTTTTTAAATCCACCATGGAATAGCAAAGATCTTAATCCTAATACTCAATTTTTAAAAGCAATGGAATTAACTGGCCAAGATTTTGTCCAACATATAAATTATGCAGCAAATGTTTGGTTACCAGCTAGATCTATCGTAGAAGAAGCTGTTGCAAAACGCTTTGAAGTTGATCCTAGCGGAGAAATTATAGAATTATCACAGTGTGTACCAT] [+] EMBL BI504717 [TACTTGTGATATTGTGGTCGATGTTGGTGAAGAATATAATCCTTGCAAGCATCGTTATGACCATCATATGAGAGATTTTAATGAATCTGTAAGTACGATTATTAAGAAACCAGGTCATGATTGGAAAACAAAACTAAGTAGTGCTGGTTTAATATATTGTCATTTTGGTCATGAAATTATCAAGGAATTAGTTCCACAAGCAAGCGATGCTGACATAGAAATAATTTTTAAACATATTTATAATACATTCATTCAAGAAATTGATAGTATAGATAATGGAATTTCTATATGTAGTGAAAATACTAAATATCAGATCGTAACAGATTTATCTTCTCGTGTTAAGTTTTTAAATCCACCATGGAATAGCAAAGATCTTAATCCTAATACTCAATTTTTAAAAGCAATGGAATTAACTGGCCAAGATTTTGTCCAACATATAAATTATGCAGCAAATGTTTGGTTACCAGCTAGATCTATCGTAGAAGAAGCTGTTGCAAAACGCTTTGAAGTTGATCCTAGCGGAGAAATTATAGAATTATCACAGTGTGTACCAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1894#0 ACATGAGCATTTTAAATACTTGTGATATTGTGGTCGATGTTGGTGAAGAATATAATCCTT 60 consensus_1894#1 ----------------TACTTGTGATATTGTGGTCGATGTTGGTGAAGAATATAATCCTT 44 ******************************************** consensus_1894#0 GCAAGCATCGTTATGACCATCATATGAGATATAAGATCGTAACAGATTTATCTTCTCG-- 118 consensus_1894#1 GCAAGCATCGTTATGACCATCATATGAGA-----GATTTTAATGAATCTGTAAGTACGAT 99 ***************************** *** *** ** * * ** consensus_1894#0 TGTTAAGTTTTTAAATCCACCATGGAATAGCAAAGATCT-TAATCCTAATACTCAATTTT 177 consensus_1894#1 TATTAAGAAACCAGGTC-ATGATTGGAAAACAAAACTAAGTAGTGCTGGTTTAATATATT 158 * ***** * ** * ** * * * **** * ** * ** * ** ** consensus_1894#0 TAAAAGCAATGGAATTAACTGGCCAAGATTTTGTCCAACATATAAATTATGCAG-CAAAT 236 consensus_1894#1 GTCATTTTGGTCATGAAATTATCAAGGAATTAGTTCCACAAGCAAGCGATGCTGACATAG 218 * * ** * * * ** ** ** * *** ** **** * ** * consensus_1894#0 GTTTGGTTACCAGCTAGATCTATCGTAGA--------AGAAGCTGTTGCAAAACGCTTTG 288 consensus_1894#1 AAATAATTTTTAAACATATTTATAATACATTCATTCAAGAAATTGATAGTATAGATAATG 278 * ** * * ** *** ** * **** ** * * * ** consensus_1894#0 AAGTTGATCCTAGCGGAGAAATTATAGAATTATCACAGTGTG-TACCATGGTTTCAGCAT 347 consensus_1894#1 GAATTTCTATATGTAGTGAAAATACTAAAT-ATCAGATCGTAACAGATTTATCTTCTCGT 337 * ** * * * **** ** *** **** * ** * * * * * * consensus_1894#0 CTTTTTGCAATAGAAAAAGAACAAAATAT--AAAACCTTTATTGAAATATGTGATTTTTA 405 consensus_1894#1 GTTAAGTTTTTAAATCCACCATGGAATAGCAAAGATCTTAATCCTAATACTCAATTTTTA 397 ** ** * * * **** ** * *** ** **** ******* consensus_1894#0 AAGATGATACTTATAGAATTAGATGCGTACCTGTGAAGCCTGATAGTTTTATATGCAGGT 465 consensus_1894#1 AAAGCAATGG--AATTAACTGGCCAAGATTTTGTCCAACATATAAATTATGCAGCAAATG 455 ** ** * ** * * * *** * * * * ** * * * consensus_1894#0 TATTTTTACCAGAATCTTGGGAAGGTTTAAAAAATGAAGCTCTGGTAAATGTCTGCGGAA 525 consensus_1894#1 TTTGGTTACCAG---CTAG---ATCTATCGTAGAAGAAGCTGTTGCAAAACGCT------ 503 * * ******* ** * * * * * * ****** * * *** ** consensus_1894#0 TCGAAGGTGCTACTTTTGTACATTCTGGTCGATTTATTGGCGGAAATCGAATGAGAGAAG 585 consensus_1894#1 TTGAAGTTGATCCTAGCGGAGAAATTA-TAGAATTATCACAGTGTGTACCAT-------- 554 * **** ** * ** * * * * * ** **** * * ** consensus_1894#0 GAATATTAATGA 597 consensus_1894#1 ------------ |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |