These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1920#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 499 fasta sequence [ACTACTTTACAAGTTCCACTGAAAGCAGGATATGACTTAAAAAAGAATACATATAGAATTGGATTAATAATATCATCGATAAGAAATAGCACAAAATAGGAACAACTGATCAGCGCAGATCTGGATTATCATCAACTTGCTTTTTAATACGTAATAATACTGTTGTGTACCACTGATCCAATCGTGAAATTGAATCATATTCCTTTACTGCTTCTGTAAAACCTTCGAGTTGTTGTTCCTCGATATGTTCTATTAATGTCTTTATCAATTTGTATTCTCTAGAATCTTGGAATGCAGGATATTGTTCTTGATAACGTTCAATTGCATGTTGAGCATTTAATACATCAACACACAAATGGCATAGCGCCGCTCGGAAAAAATATTCCTTTGCACTATATTTCAATAAAGAACTTTCTAAAGATGCAGATGCAACCTGTTCGTAAATTTGAATAGCTTTTTCATAATTTTCAAGTTGTGCAGCATACTGTGCAACTTTCAA] [+] EMBL BI512889 [ACTACTTTACAAGTTCCACTGAAAGCAGGATATGACTTAAAAAAGAATACATATAGAATTGGATTAATAATATCATCGATAAGAAATAGCACAAAATAGGAACAACTGATCAGCGCAGATCTGGATTATCATCAACTTGCTTTTTAATACGTAATAATACTGTTGTGTACCACTGATCCAATCGTGAAATTGAATCATATTCCTTTACTGCTTCTGTAAAACCTTCGAGTTGTTGTTCCTCGATATGTTCTATTAATGTCTTTATCAATTTGTATTCTCTAGAATCTTGGAATGCAGGATATTGTTCTTGATAACGTTCAATTGCATGTTGAGCATTTAATACATCAACACACAAATGGCATAGCGCCGCTCGGAAAAAATATTCCTTTGCACTATATTTCAATAAAGAACTTTCTAAAGATGCAGATGCAACCTGTTCGTAAATTTGAATAGCTTTTTCATAATTTTCAAGTTGTGCAGCATACTGTGCAACTTTCAA] consensusID : consensus_1920#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 482 fasta sequence [GTTAACATCTTCAAAGGGCTTCTTTGGTTCGCTATTTGGAGGATCATCAAAGTTTGAAGAAGCTGTAGAATGTTATCAACGTGCTGCAAATATGTTCAAGATGGCAAAGAATTGGAGTTCTGCAGGAAGTGCATTTTATGAAGCAGCAGAGTTACATGCTAAAGCAGGCAATCGTCATGATGCAGCTACTAATTATGTAGATGCTGCTAATTGTTTTAAAAAATCTAATATAAATGAGGCAATCAGTTGTCTATTAAAGGCAATTGAAATTTACACTGATATGGGTCGATTCACAATGGCAGCCAAACATCATCAAAGTATAGCTGAGATGTATGAAAGTGAAGCTGTAGATCTTGAGAGAGCAGTTCATCATTATGAGCAAGCTGCTGATTATTTTCGTGGAGAAGAGAGCAATTCCTCTGCAAATAAATGTCTTTTGAAAGTTGCACAGTATGCTGCACAACTTGAAAATTATGAAAAAG] [+] EMBL BI515639 [GTTAACATCTTCAAAGGGCTTCTTTGGTTCGCTATTTGGAGGATCATCAAAGTTTGAAGAAGCTGTAGAATGTTATCAACGTGCTGCAAATATGTTCAAGATGGCAAAGAATTGGAGTTCTGCAGGAAGTGCATTTTATGAAGCAGCAGAGTTACATGCTAAAGCAGGCAATCGTCATGATGCAGCTACTAATTATGTAGATGCTGCTAATTGTTTTAAAAAATCTAATATAAATGAGGCAATCAGTTGTCTATTAAAGGCAATTGAAATTTACACTGATATGGGTCGATTCACAATGGCAGCCAAACATCATCAAAGTATAGCTGAGATGTATGAAAGTGAAGCTGTAGATCTTGAGAGAGCAGTTCATCATTATGAGCAAGCTGCTGATTATTTTCGTGGAGAAGAGAGCAATTCCTCTGCAAATAAATGTCTTTTGAAAGTTGCACAGTATGCTGCACAACTTGAAAATTATGAAAAAG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1920#0 ACTACTTTACAAGTTCCACTGAAAGCAGGATATGACTTAAAAAAGAATACATATAGAATT 60 consensus_1920#1 ----GTTAACATCTTCAAAGGGCTTCTTTGGTTCGCTATTTGGAGGAT-CATCAAAGTTT 55 ** *** *** * * * * ** ** ** *** * ** consensus_1920#0 GGATTAATAATATCATCGATAAGAAATAGCACAAAATAGGAACAACTGATCAGCGCAGAT 120 consensus_1920#1 GAAGAAGCTGTAGAAT-GTTATCAACGTGCTGCAAATATGTTCAA--GAT-GGCAAAGAA 111 * * * ** ** * ** ** ** ***** * *** *** ** *** consensus_1920#0 CTGGATTATCATCA-ACTTGCTTTTTAATACGTAATAATACTGTTGTGTACCACTGATCC 179 consensus_1920#1 TTGGAGTTCTGCAGGAAGTGCATTT---TATGAAGCAGCAGAGTTACATGCTA------- 161 **** * * *** *** ** * * * * *** * * * consensus_1920#0 AATCGTGAAATTGAATCAT-ATTCCTTTACTGCTTCTGTAAAACCTTCGAGTTGTTGTTC 238 consensus_1920#1 AAGCAGGCAATCG--TCATGATGCAGCTACTAATTATGTAGATGCTGCTAATTGTTTTAA 219 ** * * *** * **** ** * **** ** **** * ** * * ***** * consensus_1920#0 CTCGATATGTTCTATTAATGTCTTTATCAATTTGTATTCTCTAGAATCTTGGAATGCAG- 297 consensus_1920#1 ---AAAATCTAATATAAATGAGGCAATCAGTT-GTCTATTAAAGGCAATTGAAATTTACA 275 * ** * *** **** **** ** ** * * ** *** *** * consensus_1920#0 --GATATTG-----TTCTTGATAACGTTCAATTGCATGTTGAGCATTTAATACATCAACA 350 consensus_1920#1 CTGATATGGGTCGATTCACAATGGCAGCCAA--ACATCATCAAAGTATAGCTGAGATGTA 333 ***** * *** ** * *** *** * * * ** * * consensus_1920#0 CACAAATGGCATAGCGCCGCTCGGAAAAAATATTCCTTTGCACTA-TATTTCAATAAAGA 409 consensus_1920#1 TGAAAGTGAAGCTGTAGATCTTGAGAGAGCAGTTCATCATTATGAGCAAGCTGCTGATTA 393 ** ** * ** * * * *** * * * * * * * consensus_1920#0 ACTTTCTAAAGATGCAGATGCAACCTGTTCGTAAATTTGAATAGCTTTTTCATAATTTTC 469 consensus_1920#1 TTTTCGTGGAGAAG-AGA-GCAATTCCTCTGCAAAT--AAATG--TCTTTTGAAAGTTGC 447 ** * *** * *** **** * * **** *** * *** ** ** * consensus_1920#0 AAGTTGTGCAGCATACTGTGCAACTTTCAA----- 499 consensus_1920#1 ACAGTATGCTGCACAACTTGAAAATTATGAAAAAG 482 * * *** *** * ** ** ** * |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |