These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2016#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 532 fasta sequence [ATTCTCGTTTCCATTCCCCACCATCCTCGCAGCGAGAAGTGCAGCGTTAATTAGCGTAATAAGGAATCCAACGTTCCTTGCGATAATATTGTGAATCGAATCGCGCCCGGATCATTTCGCCTCGATCCTTGTCGTCGGATCCTTCGTTCGTTCGTTCGTTCGTTCGTTGAGAAGAAAAAAATTGGGAGAAATTGGCGGGGATGTCGGTCGAACGAGTCGAACGTACGAATTGAAGTGTACGCGCGTTTGCTCCGATTTCGAGAGAGGAGGTAGAGGAGAAGAAACGGGGCCAAAATTTAGAGATTCGAGTTATCGATCGAACTGAACGTTTCGAAATTTTTAAAAGTTTAAAGTACAAATTAACGATGCCACGTTGATACGATATCTTGGATGCTATCTTTTATTAATTTCTAGGATATTAGCGAAGATTTTAACGCGACTGAAATGTCTCGATACATCGTGTTTCTTTTATAACGGGATATGACGATGAAATGAATTATGAAATTATTAAATTTACTTGTAATTTATTTCT] [+] EMBL BI509892 [ATTCTCGTTTCCATTCCCCACCATCCTCGCAGCGAGAAGTGCAGCGTTAATTAGCGTAATAAGGAATCCAACGTTCCTTGCGATAATATTGTGAATCGAATCGCGCCCGGATCATTTCGCCTCGATCCTTGTCGTCGGATCCTTCGTTCGTTCGTTCGTTCGTTCGTTGAGAAGAAAAAAATTGGGAGAAATTGGCGGGGATGTCGGTCGAACGAGTCGAACGTACGAATTGAAGTGTACGCGCGTTTGCTCCGATTTCGAGAGAGGAGGTAGAGGAGAAGAAACGGGGCCAAAATTTAGAGATTCGAGTTATCGATCGAACTGAACGTTTCGAAATTTTTAAAAGTTTAAAGTACAAATTAACGATGCCACGTTGATACGATATCTTGGATGCTATCTTTTATTAATTTCTAGGATATTAGCGAAGATTTTAACGCGACTGAAATGTCTCGATACATCGTGTTTCTTTTATAACGGGATATGACGATGAAATGAATTATGAAATTATTAAATTTACTTGTAATTTATTTCT] consensusID : consensus_2016#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 218 fasta sequence [CACCGATTAAAATCTAACGTGGATTAGCGATGCGACGTTGAATAGAAAATGTTTCGAATGAAAGATAATTTTCGAAAATTTTGAATTTTAATAAATCTTTCCCCAAGTTTAAAATATTACGATATCAATAATTTAAAAACGCCATCTAAACGCCATGAGAAGAGAAATAAATTACAAGTAAATTTAATAATTTCATAATTCATTTCATCGTCATATCA] [+] EMBL BI504351 [CACCGATTAAAATCTAACGTGGATTAGCGATGCGACGTTGAATAGAAAATGTTTCGAATGAAAGATAATTTTCGAAAATTTTGAATTTTAATAAATCTTTCCCCAAGTTTAAAATATTACGATATCAATAATTTAAAAACGCCATCTAAACGCCATGAGAAGAGAAATAAATTACAAGTAAATTTAATAATTTCATAATTCATTTCATCGTCATATCA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2016#0 ATTCTCGTTTCCATTCCCCACCATCCTCGCAGCGAGAAGTGCAGCGTTAATTAGCGTAAT 60 consensus_2016#1 ------------------------------------------------------------ consensus_2016#0 AAGGAATCCAACGTTCCTTGCGATAATATTGTGAATCGAATCGCGCCCGGATCATTTCGC 120 consensus_2016#1 ------------------------------------------------------------ consensus_2016#0 CTCGATCCTTGTCGTCGGATCCTTCGTTCGTTCGTTCGTTCGTTCGTTGAGAAGAAAAAA 180 consensus_2016#1 ------------------------------------------------------------ consensus_2016#0 ATTGGGAGAAATTGGCGGGGATGTCGGTCGAACGAGTCGAACGTACGAATTGAAGTGTAC 240 consensus_2016#1 ------------------------------------------------------------ consensus_2016#0 GCGCGTTTGCTCCGATTTCGAGAGAGGAGGTAGAGGAGAAGAAACGGGGCCAAAATTTAG 300 consensus_2016#1 ------------------------------------------------------------ consensus_2016#0 AGATTCGAGTTATCGATCGAACTGAACGTTTCGAAATTTTTAAAAGTTTAAAGTACAAAT 360 consensus_2016#1 ----------------------------------CACCGATTAAAATCTAACGT--GGAT 24 * * *** * *** ** ** consensus_2016#0 TAACGATGCCACGTTGAT---ACGATATCTTGGATGCTATCT--TTTATTAATTTCTAGG 415 consensus_2016#1 TAGCGATGCGACGTTGAATAGAAAATGTTTCGAATGAAAGATAATTTTCGAAAATTTTGA 84 ** ****** ******* * ** * * * *** * * *** ** * * * consensus_2016#0 ATATTAGCGAAGATTTTAACGCGACTGAAATGTCTCGATACATCGTGTTT-------CTT 468 consensus_2016#1 ATTTTAATAAATCTTTCCCCAAGTTTAAAATATTACGATATCAATAATTTAAAAACGCCA 144 ** *** ** *** * * * **** * ***** *** * consensus_2016#0 TTATAACGGGATATGACGATGAAATGAATTATGAAATTATTAAATTTACTTGTAATTTAT 528 consensus_2016#1 TCTAAACGCCATGAGAAGA-GAAATAAATTACAAGTAAATTTAATAATTTCATAATTCAT 203 * **** ** ** ** ***** ***** * *** *** * ***** ** consensus_2016#0 TTCT----------- 532 consensus_2016#1 TTCATCGTCATATCA 218 *** |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |