These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2018#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 526 fasta sequence [TAGTCCTGAAAAATCAGAGGATCAAGAAATTAAGGATATAAGTGATGACCAGAGTACTATCCATTCAATTACAATTGGAAGGAAAACAAGAGGACGTCCTAGAGGAAGACGAAGACGTGGCTATAGGGGAAGTGGACGTTCAAATCGGCCAAAACATTCTGAATTTCAAAGCATTCAATCTTCTGAAATATCACCTGAAGTTCATCTTGATGGAACACCAAGTAATAATGATTCTTTAAATATGACACCAATTTCACAGAAAAAACGAAAGAAAAGAAAAATGGTTTTGGGTCTAGAAGTAGGAAGAGATATTGTTCCTGAAACACAGACAGGATTAATTCAAGATGAAACACCTGTAAGACAGTCTAGAAGAATAGCACAATTAAAAATTAAAGAAGAGGCAGATAGACGAAGGATTGAAGAGGAAACTTCAAATGAAAGAAAAGAAAAGAAAGATTGTATGGAAAAGAAAAAACGAAAAAAACAAAAACCTGAAAGTGAAGAAGAAATTGTGATAAGGGAAACG] [+] EMBL BI514935 [TAGTCCTGAAAAATCAGAGGATCAAGAAATTAAGGATATAAGTGATGACCAGAGTACTATCCATTCAATTACAATTGGAAGGAAAACAAGAGGACGTCCTAGAGGAAGACGAAGACGTGGCTATAGGGGAAGTGGACGTTCAAATCGGCCAAAACATTCTGAATTTCAAAGCATTCAATCTTCTGAAATATCACCTGAAGTTCATCTTGATGGAACACCAAGTAATAATGATTCTTTAAATATGACACCAATTTCACAGAAAAAACGAAAGAAAAGAAAAATGGTTTTGGGTCTAGAAGTAGGAAGAGATATTGTTCCTGAAACACAGACAGGATTAATTCAAGATGAAACACCTGTAAGACAGTCTAGAAGAATAGCACAATTAAAAATTAAAGAAGAGGCAGATAGACGAAGGATTGAAGAGGAAACTTCAAATGAAAGAAAAGAAAAGAAAGATTGTATGGAAAAGAAAAAACGAAAAAAACAAAAACCTGAAAGTGAAGAAGAAATTGTGATAAGGGAAACG] consensusID : consensus_2018#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 386 fasta sequence [AGTTCAGAAGATGAGGCTATGAAATGTAGTCCTGAAAAATCAGAGGATCAAGAAATTAAGGATATAAGTGATGACCAGAGTACTATCCATTCAATTACAATTGGAAGGAAAACAAGAGGACGTCCTAGAGGAAGACGAAGACGTGGCTATAGGGGAAGTGGACGTTCAAATCGGCCAAAACATTCTGAATTTCAAAGCATTCAATCTTCTGAAATATCACCTGAAGTTCATCTTGATGGAACACCAAGTAATAATGATTCTTTAAATATGACACCAATTTCACAGAAAAAACGAAAGAAAAAAGTAGGAAGAGATATTGTTCCTGAAACACAGACAGGATTAATTCAAGATGAAACACCTGTAAGACAGTCTAGAAGAATAGCACA] [+] EMBL BI512776 [AGTTCAGAAGATGAGGCTATGAAATGTAGTCCTGAAAAATCAGAGGATCAAGAAATTAAGGATATAAGTGATGACCAGAGTACTATCCATTCAATTACAATTGGAAGGAAAACAAGAGGACGTCCTAGAGGAAGACGAAGACGTGGCTATAGGGGAAGTGGACGTTCAAATCGGCCAAAACATTCTGAATTTCAAAGCATTCAATCTTCTGAAATATCACCTGAAGTTCATCTTGATGGAACACCAAGTAATAATGATTCTTTAAATATGACACCAATTTCACAGAAAAAACGAAAGAAAAAAGTAGGAAGAGATATTGTTCCTGAAACACAGACAGGATTAATTCAAGATGAAACACCTGTAAGACAGTCTAGAAGAATAGCACA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2018#0 --------------------------TAGTCCTGAAAAATCAGAGGATCAAGAAATTAAG 34 consensus_2018#1 AGTTCAGAAGATGAGGCTATGAAATGTAGTCCTGAAAAATCAGAGGATCAAGAAATTAAG 60 ********************************** consensus_2018#0 GATATAAGTGATGACCAGAGTACTATCCATTCAATTACAATTGGAAGGAAAACAAGAGGA 94 consensus_2018#1 GATATAAGTGATGACCAGAGTACTATCCATTCAATTACAATTGGAAGGAAAACAAGAGGA 120 ************************************************************ consensus_2018#0 CGTCCTAGAGGAAGACGAAGACGTGGCTATAGGGGAAGTGGACGTTCAAATCGGCCAAAA 154 consensus_2018#1 CGTCCTAGAGGAAGACGAAGACGTGGCTATAGGGGAAGTGGACGTTCAAATCGGCCAAAA 180 ************************************************************ consensus_2018#0 CATTCTGAATTTCAAAGCATTCAATCTTCTGAAATATCACCTGAAGTTCATCTTGATGGA 214 consensus_2018#1 CATTCTGAATTTCAAAGCATTCAATCTTCTGAAATATCACCTGAAGTTCATCTTGATGGA 240 ************************************************************ consensus_2018#0 ACACCAAGTAATAATGATTCTTTAAATATGACACCAATTTCACAGAAAAAACGAAAGAAA 274 consensus_2018#1 ACACCAAGTAATAATGATTCTTTAAATATGACACCAATTTCACAGAAAAAACGAAAGAAA 300 ************************************************************ consensus_2018#0 AGAAAAATGGTTTTGGGTCTAGAAGTAGGAAGAGATATTGTTCCTGAAACACAGACAGGA 334 consensus_2018#1 A---------------------AAGTAGGAAGAGATATTGTTCCTGAAACACAGACAGGA 339 * ************************************** consensus_2018#0 TTAATTCAAGATGAAACACCTGTAAGACAGTCTAGAAGAATAGCACAATTAAAAATTAAA 394 consensus_2018#1 TTAATTCAAGATGAAACACCTGTAAGACAGTCTAGAAGAATAGCACA------------- 386 *********************************************** consensus_2018#0 GAAGAGGCAGATAGACGAAGGATTGAAGAGGAAACTTCAAATGAAAGAAAAGAAAAGAAA 454 consensus_2018#1 ------------------------------------------------------------ consensus_2018#0 GATTGTATGGAAAAGAAAAAACGAAAAAAACAAAAACCTGAAAGTGAAGAAGAAATTGTG 514 consensus_2018#1 ------------------------------------------------------------ consensus_2018#0 ATAAGGGAAACG 526 consensus_2018#1 ------------ |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |