These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2136#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 465 fasta sequence [GAGTTCAATATATAGAAATGCCTCAACAAGGAACAGTTTTCGATGACACATGGTTATTGGTTCTAATATCTTCTTGCATCGGTGTAATTTTCATAGGCATCGTACTAGCAACATTACTCTTGAAATGCAAATTTAATAAAAGTGGTAAGAGTGGCGTAATTTCTATACCAAATGCGACATCTGGTATACAAGCAAAAAACGGAAGAATTCAAAATGAAGCTGTTCTTTACCCTTGTGGAGCTGATACTATGCAAGATAGTCGTGTTATGTGGGCTACTCTTACACCACGGGGTACTACTAGACATTATCTAGAAGAACATACTTATGAAACAATCGGCGGTGGACAATTTCATAAACGTGCCTGTTCAACTACGCCAACTGAACAGGTAAAACTTAAGACTTATGCAGATCCTCCAGTTACAACTCCGATTCAAAATCGATTAAAGGACGACAAAGCCTTTGATA] [+] EMBL BI513672 [GAGTTCAATATATAGAAATGCCTCAACAAGGAACAGTTTTCGATGACACATGGTTATTGGTTCTAATATCTTCTTGCATCGGTGTAATTTTCATAGGCATCGTACTAGCAACATTACTCTTGAAATGCAAATTTAATAAAAGTGGTAAGAGTGGCGTAATTTCTATACCAAATGCGACATCTGGTATACAAGCAAAAAACGGAAGAATTCAAAATGAAGCTGTTCTTTACCCTTGTGGAGCTGATACTATGCAAGATAGTCGTGTTATGTGGGCTACTCTTACACCACGGGGTACTACTAGACATTATCTAGAAGAACATACTTATGAAACAATCGGCGGTGGACAATTTCATAAACGTGCCTGTTCAACTACGCCAACTGAACAGGTAAAACTTAAGACTTATGCAGATCCTCCAGTTACAACTCCGATTCAAAATCGATTAAAGGACGACAAAGCCTTTGATA] consensusID : consensus_2136#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 279 fasta sequence [CCACCGTTCCCAGCCATTTTTCAACATAGCTCTGATTTTTATTCACACACGGATTTATTATCGTTCCCATCTCATTTCAATGACAGCCCTTGCAAACATTTTTGCGATCGCCGCTCTGAAGGAGTTCAATATATAGAAATGCCTCAACAAGGAACAGTTTTCGATGACACATGGTTATTGGTTCTAATATCTTCTTGCATCGGTGTAATTTTCATAGGCATCGTACTAGCAACATTACTCTTGAAATGCAAATTGTAAGTCTTTTTTTTCTATTTCTTT] [+] EMBL BI504019 [CCACCGTTCCCAGCCATTTTTCAACATAGCTCTGATTTTTATTCACACACGGATTTATTATCGTTCCCATCTCATTTCAATGACAGCCCTTGCAAACATTTTTGCGATCGCCGCTCTGAAGGAGTTCAATATATAGAAATGCCTCAACAAGGAACAGTTTTCGATGACACATGGTTATTGGTTCTAATATCTTCTTGCATCGGTGTAATTTTCATAGGCATCGTACTAGCAACATTACTCTTGAAATGCAAATTGTAAGTCTTTTTTTTCTATTTCTTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2136#0 GAGTTCAATATATAGAAATGCCTCAACAAGGAACAGTTTTCGATGACACATGGTTATTGG 60 consensus_2136#1 -----------------------------------------------------CCACCGT 7 * * consensus_2136#0 TTCTAAT-ATCTTCTTGCATCGGTGTAATTTTCATAGGCATCGTACTAGCAACATTACTC 119 consensus_2136#1 TCCCAGCCATTTTTCAACATAGCTCTGATTTTTAT-----TCACAC--ACGGATTTATTA 60 * * * ** ** *** * * * ***** ** ** ** * *** * consensus_2136#0 TTGAAATGCAAATTTAATAAAAGTGGTAAGAGTGGCGTAATTTCTATACCAAATGCGACA 179 consensus_2136#1 TCG---TTCCCATCTCATTTCAATGACAGCCCTTGCAAACATTTT--------TGCGATC 109 * * * * ** * ** * ** * * ** * ** * ***** consensus_2136#0 TCTGGTATACAAGCAAAAAACGGAAGAATTCAAAATGAAGCTGTTCTTTACCCTTGTGGA 239 consensus_2136#1 GCCGCTCT-------------GAAGGAGTTCAATATATAGAAATGCCTCAACAAGGAACA 156 * * * * * * ** ***** ** ** * * * * * * * consensus_2136#0 GCTGATACTATGCAAGATAGTCGTGTTATGTGGGCTACTCTTACACCA-CGGGGTACTAC 298 consensus_2136#1 GTT--TTCGATGACACATGGTTATTGGTTCTAATATCTTCTTGCATCGGTGTAATTTTCA 214 * * * * *** * ** ** * * * * **** ** * * * * consensus_2136#0 TAGACATTAT-CTAGAAGAACATACTTATGAAACAATCGGCGGTGGACAATTTCATAAAC 357 consensus_2136#1 TAGGCATCGTACTAGCAACAT-TACTCTTGAAATGCAAATTGTAAGTCTTTTTTTTCTAT 273 *** *** * **** * * **** ***** * * * *** * * consensus_2136#0 GTGCCTGTTCAACTACGCCAACTGAACAGGTAAAACTTAAGACTTATGCAGATCCTCCAG 417 consensus_2136#1 TTCTTT------------------------------------------------------ 279 * * consensus_2136#0 TTACAACTCCGATTCAAAATCGATTAAAGGACGACAAAGCCTTTGATA 465 consensus_2136#1 ------------------------------------------------ |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |