These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2188#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 546 fasta sequence [CACGTACAAGAGTTACGACACAACCAACACCTAGAATTTCAGATGGATCTTGGACGAGACCAGCGTCTAAGATCCATCGAAACTCTCGACGATTTTATATATATATATATATATATGTACGCGCACATGTATATCTCACGGCCGCAATGATCGCGATCTTCTTCGCCGCCGATACGAAGAGGATCAGGGATCGTTGCCCTGAAATCTCGAATCCCCCCCTTGTAAATTGTTTTCCTTCGAAAAAATCTATCTGCCCCTTCCTTCTAGAATTGGTAGAATTCGAGTAGGAACAGGAGCGAAACTCGTCCACGAGCTTAGACGAGATGATTAATAAGCATAAGCTTCTGAGAGACACGAGCCATTATTTTAATGGGTCGTTAGACTCGATAAGCGATTCCGCCTTCATCCAGCTGGCTAATTTGACGAGCTTTTAACAAAATAGGTCGGATGTAAGTAAGAATAATAACGACGTACTCGCCGAGTTTAGATTTTAGATCGGTGGGACGAGTCTTGTAGAAGTAGATAGTAAGTAGAGAGGAGAGAATT] [+] EMBL BI514275 [CACGTACAAGAGTTACGACACAACCAACACCTAGAATTTCAGATGGATCTTGGACGAGACCAGCGTCTAAGATCCATCGAAACTCTCGACGATTTTATATATATATATATATATATGTACGCGCACATGTATATCTCACGGCCGCAATGATCGCGATCTTCTTCGCCGCCGATACGAAGAGGATCAGGGATCGTTGCCCTGAAATCTCGAATCCCCCCCTTGTAAATTGTTTTCCTTCGAAAAAATCTATCTGCCCCTTCCTTCTAGAATTGGTAGAATTCGAGTAGGAACAGGAGCGAAACTCGTCCACGAGCTTAGACGAGATGATTAATAAGCATAAGCTTCTGAGAGACACGAGCCATTATTTTAATGGGTCGTTAGACTCGATAAGCGATTCCGCCTTCATCCAGCTGGCTAATTTGACGAGCTTTTAACAAAATAGGTCGGATGTAAGTAAGAATAATAACGACGTACTCGCCGAGTTTAGATTTTAGATCGGTGGGACGAGTCTTGTAGAAGTAGATAGTAAGTAGAGAGGAGAGAATT] consensusID : consensus_2188#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 452 fasta sequence [TCGCCTCGACTCCGAGGGGCGTAACAAGGAGCTCTGGTACAAGGAAGGCTGCGCGACGGCTATTCAAATGTGGCTGGTGACCAGGCTGCACGTGGTCGGGACCGTTGGCCTCGTGGTGGCCTTCCTCCAGTTGTTCGGCCAGGTGGCCAGCATGATCCTCTTCTGCACCGTCAGGCACAAGAGGTCGTCCCACACGTACAAGAGTTACGACACAACCAACACCTAGAATTTCAGATGGATCTTGGACGAGACCAGCGTCTAAGATCCATCGAAACTCTCGACGATTTTATATATATATATATATATATATGTACGCGCACATGTATATCTCACGGCCGCAATGATCGCGATCTTCTTCGCCGCCGATACGAAGNGGATCAGGGATCGTTGCCCCTGTATGCCCCGAAATCTCGAATCCCCCCCTTGTAAATTGTTTTCCTTCGAAAAAATCT] [+] EMBL BI516261 [TCGCCTCGACTCCGAGGGGCGTAACAAGGAGCTCTGGTACAAGGAAGGCTGCGCGACGGCTATTCAAATGTGGCTGGTGACCAGGCTGCACGTGGTCGGGACCGTTGGCCTCGTGGTGGCCTTCCTCCAGTTGTTCGGCCAGGTGGCCAGCATGATCCTCTTCTGCACCGTCAGGCACAAGAGGTCGTCCCACACGTACAAGAGTTACGACACAACCAACACCTAGAATTTCAGATGGATCTTGGACGAGACCAGCGTCTAAGATCCATCGAAACTCTCGACGATTTTATATATATATATATATATATATGTACGCGCACATGTATATCTCACGGCCGCAATGATCGCGATCTTCTTCGCCGCCGATACGAAGNGGATCAGGGATCGTTGCCCCTGTATGCCCCGAAATCTCGAATCCCCCCCTTGTAAATTGTTTTCCTTCGAAAAAATCT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2188#0 ------------------------------------------------------------ consensus_2188#1 TCGCCTCGACTCCGAGGGGCGTAACAAGGAGCTCTGGTACAAGGAAGGCTGCGCGACGGC 60 consensus_2188#0 ------------------------------------------------------------ consensus_2188#1 TATTCAAATGTGGCTGGTGACCAGGCTGCACGTGGTCGGGACCGTTGGCCTCGTGGTGGC 120 consensus_2188#0 ------------------------------------------------------------ consensus_2188#1 CTTCCTCCAGTTGTTCGGCCAGGTGGCCAGCATGATCCTCTTCTGCACCGTCAGGCACAA 180 consensus_2188#0 ------------CACGTACAAGAGTTACGACACAACCAACACCTAGAATTTCAGATGGAT 48 consensus_2188#1 GAGGTCGTCCCACACGTACAAGAGTTACGACACAACCAACACCTAGAATTTCAGATGGAT 240 ************************************************ consensus_2188#0 CTTGGACGAGACCAGCGTCTAAGATCCATCGAAACTCTCGACGATTTTATATATATATAT 108 consensus_2188#1 CTTGGACGAGACCAGCGTCTAAGATCCATCGAAACTCTCGACGATTTTATATATATATAT 300 ************************************************************ consensus_2188#0 ATATATAT--GTACGCGCACATGTATATCTCACGGCCGCAATGATCGCGATCTTCTTCGC 166 consensus_2188#1 ATATATATATGTACGCGCACATGTATATCTCACGGCCGCAATGATCGCGATCTTCTTCGC 360 ******** ************************************************** consensus_2188#0 CGCCGATACGAAGAGGATCAGGGATCGTTGCCCT----------GAAATCTCGAATCCCC 216 consensus_2188#1 CGCCGATACGAAGNGGATCAGGGATCGTTGCCCCTGTATGCCCCGAAATCTCGAATCCCC 420 ************* ******************* **************** consensus_2188#0 CCCTTGTAAATTGTTTTCCTTCGAAAAAATCTATCTGCCCCTTCCTTCTAGAATTGGTAG 276 consensus_2188#1 CCCTTGTAAATTGTTTTCCTTCGAAAAAATCT---------------------------- 452 ******************************** consensus_2188#0 AATTCGAGTAGGAACAGGAGCGAAACTCGTCCACGAGCTTAGACGAGATGATTAATAAGC 336 consensus_2188#1 ------------------------------------------------------------ consensus_2188#0 ATAAGCTTCTGAGAGACACGAGCCATTATTTTAATGGGTCGTTAGACTCGATAAGCGATT 396 consensus_2188#1 ------------------------------------------------------------ consensus_2188#0 CCGCCTTCATCCAGCTGGCTAATTTGACGAGCTTTTAACAAAATAGGTCGGATGTAAGTA 456 consensus_2188#1 ------------------------------------------------------------ consensus_2188#0 AGAATAATAACGACGTACTCGCCGAGTTTAGATTTTAGATCGGTGGGACGAGTCTTGTAG 516 consensus_2188#1 ------------------------------------------------------------ consensus_2188#0 AAGTAGATAGTAAGTAGAGAGGAGAGAATT 546 consensus_2188#1 ------------------------------ |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |