These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2206#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 458 fasta sequence [GTAACAAACCTCATCCGTCCATAAGCCTTAATTGATACATAGGTCGAGCTATGCCATCCTGATCGACCTCAATTTCGCACAAAGAGTCGCAGAGTGTAGCGATAAAACGTTGGAACATAAAAATAAAAAAAAAATTTCGATCGATCAAGAAACAACGGAAGAAATATGTCGTTCTTTGTAATTGCCAAGGATGTGATAGTTTTCCTTTTTTGGACAGTGATATTTATCATGAAAAATATCGTCAATTTGTTCATCCCGTTGAAATACAAGATGAAGAGCATTGCTGGAGAAATTACACTAGTTACCGGAGGTGGTGGTGGTTTAGGAAGGTTAACAGCCCTTAGGTTGGCCAATCTCGGTGCCATTGTTGTCATCTGGGACGTTAACAAGGCTGGTATGGAAGAGACTGTCAAGTTGGTGCAGTCCGCGGGTGGTACTTGTTACGGTTATGTTTGCGA] [+] EMBL BI511712 [GTAACAAACCTCATCCGTCCATAAGCCTTAATTGATACATAGGTCGAGCTATGCCATCCTGATCGACCTCAATTTCGCACAAAGAGTCGCAGAGTGTAGCGATAAAACGTTGGAACATAAAAATAAAAAAAAAATTTCGATCGATCAAGAAACAACGGAAGAAATATGTCGTTCTTTGTAATTGCCAAGGATGTGATAGTTTTCCTTTTTTGGACAGTGATATTTATCATGAAAAATATCGTCAATTTGTTCATCCCGTTGAAATACAAGATGAAGAGCATTGCTGGAGAAATTACACTAGTTACCGGAGGTGGTGGTGGTTTAGGAAGGTTAACAGCCCTTAGGTTGGCCAATCTCGGTGCCATTGTTGTCATCTGGGACGTTAACAAGGCTGGTATGGAAGAGACTGTCAAGTTGGTGCAGTCCGCGGGTGGTACTTGTTACGGTTATGTTTGCGA] consensusID : consensus_2206#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 295 fasta sequence [AGTGTTTTGCAACGAAAACGTACACAAGGGATTTACATTCGTGTAACAAACCTCATCCGTCCATAAGCCTTAATTGATACATAGGTCGAGCTATGCCATCCTGATCGACCTCAATTTCGCACAAAGAGTCGCAGAGTGTAGCGATAAAACGTTGGAACATAAAAATAAAAAAAAAATTTCGATCGATCAAGAAACAACGGAAGAAATATGTCGTTCTTTGTAATTGCCAAGGATGTGATAGTTTTCCTTTTTTGGACAGTGATATTTATCATGAAAAATATCACTGTCCAAAAAA] [+] EMBL BI503858 [AGTGTTTTGCAACGAAAACGTACACAAGGGATTTACATTCGTGTAACAAACCTCATCCGTCCATAAGCCTTAATTGATACATAGGTCGAGCTATGCCATCCTGATCGACCTCAATTTCGCACAAAGAGTCGCAGAGTGTAGCGATAAAACGTTGGAACATAAAAATAAAAAAAAAATTTCGATCGATCAAGAAACAACGGAAGAAATATGTCGTTCTTTGTAATTGCCAAGGATGTGATAGTTTTCCTTTTTTGGACAGTGATATTTATCATGAAAAATATCACTGTCCAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2206#0 ------------------------------------------GTAACAAACCTCATCCGT 18 consensus_2206#1 AGTGTTTTGCAACGAAAACGTACACAAGGGATTTACATTCGTGTAACAAACCTCATCCGT 60 ****************** consensus_2206#0 CCATAAGCCTTAATTGATACATAGGTCGAGCTATGCCATCCTGATCGACCTCAATTTCGC 78 consensus_2206#1 CCATAAGCCTTAATTGATACATAGGTCGAGCTATGCCATCCTGATCGACCTCAATTTCGC 120 ************************************************************ consensus_2206#0 ACAAAGAGTCGCAGAGTGTAGCGATAAAACGTTGGAACATAAAAATAAAAAAAAAATTTC 138 consensus_2206#1 ACAAAGAGTCGCAGAGTGTAGCGATAAAACGTTGGAACATAAAAATAAAAAAAAAATTTC 180 ************************************************************ consensus_2206#0 GATCGATCAAGAAACAACGGAAGAAATATGTCGTTCTTTGTAATTGCCAAGGATGTGATA 198 consensus_2206#1 GATCGATCAAGAAACAACGGAAGAAATATGTCGTTCTTTGTAATTGCCAAGGATGTGATA 240 ************************************************************ consensus_2206#0 GTTTTCCTTTTTTGGACAGTGATATTTATCATGAAAAATATCGTCAATTTGTTCATCCCG 258 consensus_2206#1 GTTTTCCTTTTTTGGACAGTGATATTTATCATGAAAAATATCACTGTCCAAAAAA----- 295 ****************************************** * consensus_2206#0 TTGAAATACAAGATGAAGAGCATTGCTGGAGAAATTACACTAGTTACCGGAGGTGGTGGT 318 consensus_2206#1 ------------------------------------------------------------ consensus_2206#0 GGTTTAGGAAGGTTAACAGCCCTTAGGTTGGCCAATCTCGGTGCCATTGTTGTCATCTGG 378 consensus_2206#1 ------------------------------------------------------------ consensus_2206#0 GACGTTAACAAGGCTGGTATGGAAGAGACTGTCAAGTTGGTGCAGTCCGCGGGTGGTACT 438 consensus_2206#1 ------------------------------------------------------------ consensus_2206#0 TGTTACGGTTATGTTTGCGA 458 consensus_2206#1 -------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |