These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2325#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 507 fasta sequence [AAACTCAAAATATAAGTAACATAAGGGTAACGACCAAAGTCGCAGTGCATTCGTTGCTTTCAAATTCGATCGACTTGCAGATTCGTGGCGCCGCTATTATTCACAATCTTGCCTGCAAGGAGGTAAAAACTGTGGTATTCGATGATGTTGCTGTAGAATTGACAATGGCATTGTTGCAATACTTCAATGGTAGTCCTGCTGAAGAACAGTTATATGCCTGTATGAAGTCATTGGCACGTTTTACGCAAATTAGTGGTCAAGATGTACCACAGCTTATACAAATGATTGGACCAGAACCAAACAAATTTCGTGGAACGTCTGAAAGAATTGACGAACAAATTGATCAGGTTAATAAGAAATTACGTTAAACGTAATTCAATATAATTTTATTAATAATAGAAATCGTTAAATTCCAAACGATGCAATTGAAAATGATTAATTATAGTATATAATTGAATTTTTACATAGAAATTTTATTAAAATTATCTAAATAGTGTGTTATTAAAA] [+] EMBL BI503557 [AAACTCAAAATATAAGTAACATAAGGGTAACGACCAAAGTCGCAGTGCATTCGTTGCTTTCAAATTCGATCGACTTGCAGATTCGTGGCGCCGCTATTATTCACAATCTTGCCTGCAAGGAGGTAAAAACTGTGGTATTCGATGATGTTGCTGTAGAATTGACAATGGCATTGTTGCAATACTTCAATGGTAGTCCTGCTGAAGAACAGTTATATGCCTGTATGAAGTCATTGGCACGTTTTACGCAAATTAGTGGTCAAGATGTACCACAGCTTATACAAATGATTGGACCAGAACCAAACAAATTTCGTGGAACGTCTGAAAGAATTGACGAACAAATTGATCAGGTTAATAAGAAATTACGTTAAACGTAATTCAATATAATTTTATTAATAATAGAAATCGTTAAATTCCAAACGATGCAATTGAAAATGATTAATTATAGTATATAATTGAATTTTTACATAGAAATTTTATTAAAATTATCTAAATAGTGTGTTATTAAAA] consensusID : consensus_2325#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 330 fasta sequence [ATTTTGTAGGGCGAATTCTATATGATAAATCTTTGTTAAATGATGCAAGAGTAAAATTATTGAATATATTATCTGTTGCTGCATTAAAAGACGATGTAATCCTTTTATTACATCAGGATAGAAGGGAACATATAATTATGAATTATGCTTTCGATATTGATCGTCATCCCCAAGAAGAACAACTTCCCCTTGCACAATTTTTGGCAAATATGTTCGAAAATCTTAGTAGTTCAGAATGGCTNNTATACATATCGGAATGGCAATATCAAACTCAAAATATAAGTAACATAAGGGTAACGACCAAAGTCGCAGTGCATTCGTTGCTTTCAA] [+] EMBL BI510937 [ATTTTGTAGGGCGAATTCTATATGATAAATCTTTGTTAAATGATGCAAGAGTAAAATTATTGAATATATTATCTGTTGCTGCATTAAAAGACGATGTAATCCTTTTATTACATCAGGATAGAAGGGAACATATAATTATGAATTATGCTTTCGATATTGATCGTCATCCCCAAGAAGAACAACTTCCCCTTGCACAATTTTTGGCAAATATGTTCGAAAATCTTAGTAGTTCAGAATGGCTNNTATACATATCGGAATGGCAATATCAAACTCAAAATATAAGTAACATAAGGGTAACGACCAAAGTCGCAGTGCATTCGTTGCTTTCAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2325#0 AAACTCAAAATATAAGTAACATAAGGGTAACGACCAAAGTCGCAGTGCATTCGTTGCTTT 60 consensus_2325#1 ------------------------------------------------------------ consensus_2325#0 CAAATTCGATCGACTTGCAGATTCGTGGCGCCGCTATTAT-TCACAATCTTGCCTGCAAG 119 consensus_2325#1 -------------------ATTTTGTAGGGCGAATTCTATATGATAAATCTTTGTTAAAT 41 ** ** * ** * *** * * ** * * ** consensus_2325#0 GAGGTAAAAACTGTGGTATTCGATGATGTTGCTGTAGAATTGACAATGGCATTGTTGCAA 179 consensus_2325#1 GATGCAAGAGTAAAATTATTGAATATATTATCTGTTGCTGCATTAAAAGA--CGATGTAA 99 ** * ** * **** ** * **** * ** * * ** ** consensus_2325#0 TACTTCAATGGTAGTCCTGCTGAAGAACAGTTATATGCCTGTATGAAGTCATTGGCACGT 239 consensus_2325#1 TCCTTTTATTACATCAGGATAGAAGGGAACATATAATTATGAATTATGCTTTCG--ATAT 157 * *** ** * **** * **** ** ** * * * * * * consensus_2325#0 TTTACGCAAATTAGTGGTCAAGATGTACCACAGCTTATACAAATGATTGGACCAGAACCA 299 consensus_2325#1 TGATCGTCATCCCCAAG--AAGAACAACTTCCCCTTGCACAATTT-TTGG--CAAATATG 212 * ** * * **** ** * *** **** * **** ** * consensus_2325#0 AACAAATTTCGTGGAACGTCTGAAAGAATTGACGAACAAATTGATCAGGTTAATAAGAAA 359 consensus_2325#1 TTCGAAAATCTTAGTA-GTTCAGAATGGCTNNTATACATATCGGAATGGC-AATATCAAA 270 * ** ** * * * ** ** * *** ** * ** **** *** consensus_2325#0 TTACGTTAAACGTAATTCAATATAATTTTATTAATAATAGAAATCGTTAAATTCCAAACG 419 consensus_2325#1 CT---CAAAATATAAGT-AACATAA---GGGTAACGACCAAAGTCGC---AGTGCATTCG 320 * *** *** * ** **** *** * ** *** * * ** ** consensus_2325#0 ATGCAATTGAAAATGATTAATTATAGTATATAATTGAATTTTTACATAGAAATTTTATTA 479 consensus_2325#1 TTGCTTTCAA-------------------------------------------------- 330 *** * * consensus_2325#0 AAATTATCTAAATAGTGTGTTATTAAAA 507 consensus_2325#1 ---------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |