These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2369#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 533 fasta sequence [GGTGCAGGCAAACGTGCGGCAGAGGGTGAAAAGGCGTGGATTGATACAATCCTGGCCACCTCCCTCTCCCAGATCGATACAACCCTTTTAACTATTTACTCTCTTTAATATTGCTATGTGTAAGAAAAAATAAAACAAACTGACAAGAGATGTGTCATTTATCGCGAAAGAAATAGAGAGGAGGAACGGGGATGAGAACTGGAACGAGAGTCGAAGATATACACCAAGATAATATAAATATATAAATACTGAATGACATTCGAGCGCGCGTGGCATGCATACAGAAACACAAAAAAATATGATTGCAAAAATTGAAAGAGTATATACTACACGGAACGGAGTATATAATTAAATTGTTCGATCTTCGTATTTTCATTTATTTCTTATATTTTTATTTTTCTCCCTTTTTAAACGAACGATATTTCTTAGCACAATTTTTTTTATCAAAGATAAATATTAACGCTGGGGACTGGTTAAAAGATTAAATATATTGAGACGCGACGTTGAAATTTGGATCTATTTAAGCGTTTAAA] [+] EMBL BI505854 [GGTGCAGGCAAACGTGCGGCAGAGGGTGAAAAGGCGTGGATTGATACAATCCTGGCCACCTCCCTCTCCCAGATCGATACAACCCTTTTAACTATTTACTCTCTTTAATATTGCTATGTGTAAGAAAAAATAAAACAAACTGACAAGAGATGTGTCATTTATCGCGAAAGAAATAGAGAGGAGGAACGGGGATGAGAACTGGAACGAGAGTCGAAGATATACACCAAGATAATATAAATATATAAATACTGAATGACATTCGAGCGCGCGTGGCATGCATACAGAAACACAAAAAAATATGATTGCAAAAATTGAAAGAGTATATACTACACGGAACGGAGTATATAATTAAATTGTTCGATCTTCGTATTTTCATTTATTTCTTATATTTTTATTTTTCTCCCTTTTTAAACGAACGATATTTCTTAGCACAATTTTTTTTATCAAAGATAAATATTAACGCTGGGGACTGGTTAAAAGATTAAATATATTGAGACGCGACGTTGAAATTTGGATCTATTTAAGCGTTTAAA] consensusID : consensus_2369#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 450 fasta sequence [TAACGACGCCTGGGAGTTACCTTTTATTACAATTATTACTTCAATGTTTATTCCTTATTTTGTTATCAATAAAAATCGTTACATAGTAGTTTGGGTTGCTGCTTGACGCCAGCCGAATCGACAAGCAATCAGTTATAGTAATAATAGTAGCAATAATATTACAGTAATAATAAATGGTAGCAGTATCGTGTATTAAATGTATGTGTGTCATGTATATGGGCGTGTGTGTATGTGTGCGTGTGTGTGTGTTTATACGCGTGAACGCATCTGTATGACTGCAGGGTGTATTTCTTGATGTAACTCGTATAAGACTGCATTAATCGAATGNNNAACGTTTACACGGTCTAAAGGAATCTATTCTTTTAAACGCTTAAATAGATCCAAATTTCAACGTCGCGTCTCAATATATTTAATCTTTTAACCAGTCCCGCGTTAATATTTATCTTTGAT] [+] EMBL BI503476 [TAACGACGCCTGGGAGTTACCTTTTATTACAATTATTACTTCAATGTTTATTCCTTATTTTGTTATCAATAAAAATCGTTACATAGTAGTTTGGGTTGCTGCTTGACGCCAGCCGAATCGACAAGCAATCAGTTATAGTAATAATAGTAGCAATAATATTACAGTAATAATAAATGGTAGCAGTATCGTGTATTAAATGTATGTGTGTCATGTATATGGGCGTGTGTGTATGTGTGCGTGTGTGTGTGTTTATACGCGTGAACGCATCTGTATGACTGCAGGGTGTATTTCTTGATGTAACTCGTATAAGACTGCATTAATCGAATGNNNAACGTTTACACGGTCTAAAGGAATCTATTCTTTTAAACGCTTAAATAGATCCAAATTTCAACGTCGCGTCTCAATATATTTAATCTTTTAACCAGTCCCGCGTTAATATTTATCTTTGAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2369#0 GGTGCAGGCAAACGTGCGGCAGAGGGTGAAAAGGCGTGGATTGATACAATCCTGGCCACC 60 consensus_2369#1 -------------------------------------------TAACGACGCCTGGGAGT 17 ** * * * * consensus_2369#0 TCCCTCTCCCAGATCGATACAACCCTTTTAACTATTTACTCTCTTTAATATTGCTATGTG 120 consensus_2369#1 TACCTTTT----ATTACAATTATTACTTCAA-TGTTTATTCCTT---ATTTTGTTATCAA 69 * *** * ** * * ** ** * **** ** * ** *** *** consensus_2369#0 TAAGAAAAAATAAAACAAACTGACAAGAGATGTGTCATTTATCGCGAAAGAAATAGAGAG 180 consensus_2369#1 TAAAAATCGTTACATAGTAGTTTGGGTTGCTGCTTGACGCCAGCCGAATCGACAAGCAAT 129 *** ** ** * * * * ** * * **** * ** * consensus_2369#0 GAGGAACGGGGATGAGAACTGGAACGAGAGTCGAAGATATACACCAAGATAATATAAATA 240 consensus_2369#1 CAGTTATAGTAATAATAGTAGCAATAATA-TTACAGTAATAATAAATGGTAGCAGTATCG 188 ** * * ** * * * ** * * * ** *** * * ** * * consensus_2369#0 TATAAATACTGAATGACATTCGAGCGCGCGTGGCATGCATACAGAAACACAAAAAAATAT 300 consensus_2369#1 TGTATTAAATGTATGTGTGTCATGTATATG-GGCGTGTGTGTATGTGTGCGTGTGTGTGT 247 * ** * ** *** ** * * *** ** * * * * * consensus_2369#0 GATTGCAAAAATTGAAAGAGTATATACTACACGGAACGGAGTATATAATTAAATTGTTCG 360 consensus_2369#1 GTTTATACGCGT-GAACGCATCTGTATGACT----GCAGGGTGTATTTCTTGAT-----G 297 * ** * * *** * * * ** ** * * ** *** * ** * consensus_2369#0 ATCTTCGTATTTTCATTTATTTCTTATATTTTTATTTTTCTCCCTTTTTAAACGAACGAT 420 consensus_2369#1 TAACTCGTATAAGACTGCATTAATCGAATGNNNAACGTTTACACGGTCTAAAGGAATC-T 356 ****** * *** * ** * ** * * * **** *** * consensus_2369#0 ATTTCTTAGCACAATTTTTTTTATCAAAGATAAATATTAACGCTGGGGACTGGTTAAAAG 480 consensus_2369#1 ATTCTTTTAAACG-----CTTAAATAGATCCAAATTTCAACGTCGCGTC----TCAATAT 407 *** ** ** ** * * * **** * **** * * * ** * consensus_2369#0 ATTAAATATATTGA--GACGCGACGTTGAAATTTGGATCTATTTAAGCGTTTAAA 533 consensus_2369#1 ATTTAATCTTTTAACCAGTCCCGCGTTAATATTTATCTTTGAT------------ 450 *** *** * ** * * **** * **** * * * |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |