These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2383#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 607 fasta sequence [AGCAAATGGTGGTTCGCAGCAAACTTCTTTGCAACAAGTACAAAATATACCGCCATTGCTTGGTCAAACCATTCCACAACCTACAAATATTTTACAAAAACAATATGATAGAACTTCGAGAAGTCAAAAACTTGCACCTAGATTCCAAAAACAGCGTTTAGCTAAACAACAGCAGCAGCAACAACAACAACAACAGCAGCAGCAGCAACAACAACAACAAATATGCACATCCGATGCGAATGATACAATCAAAATTAACAATTCATCAAATAATTTCGGTAAAGATTCATCAACTGGACCCGCACCTCCACCATCTGTGAATGCTTGGGATAAACCGTTCACTACGAGTCAGTTACAATCAAATTCTCCATCAACAGTTTCTTCTGATATCCAATTGATATCAAGTTTGTCAACACAAAATGAACATGGTCACGTTCATAGTCACGAAGTTAACGAACAAACAAATTCTGGTAATAGTAGTCAACGAAATTCACCAAGTGGTGAAAAAAATATTGGCTAAAGTTTGAAAGATCAACTTCTAGAAAAAAGTTCAGTTTCTGACGTATCTTCACCTCCTGTTCAAACGTTAATTTTTGAGAATACAAAT] [+] EMBL BI503443 [AGCAAATGGTGGTTCGCAGCAAACTTCTTTGCAACAAGTACAAAATATACCGCCATTGCTTGGTCAAACCATTCCACAACCTACAAATATTTTACAAAAACAATATGATAGAACTTCGAGAAGTCAAAAACTTGCACCTAGATTCCAAAAACAGCGTTTAGCTAAACAACAGCAGCAGCAACAACAACAACAACAGCAGCAGCAGCAACAACAACAACAAATATGCACATCCGATGCGAATGATACAATCAAAATTAACAATTCATCAAATAATTTCGGTAAAGATTCATCAACTGGACCCGCACCTCCACCATCTGTGAATGCTTGGGATAAACCGTTCACTACGAGTCAGTTACAATCAAATTCTCCATCAACAGTTTCTTCTGATATCCAATTGATATCAAGTTTGTCAACACAAAATGAACATGGTCACGTTCATAGTCACGAAGTTAACGAACAAACAAATTCTGGTAATAGTAGTCAACGAAATTCACCAAGTGGTGAAAAAAATATTGGCTAAAGTTTGAAAGATCAACTTCTAGAAAAAAGTTCAGTTTCTGACGTATCTTCACCTCCTGTTCAAACGTTAATTTTTGAGAATACAAAT] consensusID : consensus_2383#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 522 fasta sequence [GAAGAATCATTCCAACAATATTCCGCCGTTGATACAAACCACTCAAATACAAAATGGAAGATCGAGAAATCAAACTTCTGGAAATAGTTTATCGATTTCAAATAAATCGATAACAAAAGATACTACAGTGAATCGTTTAGATGAAATAAAATTAAGCGATTCTAATTTAGTTAGTCAAGCTCTTAATGATATTAATAAAAGATCCCAAGGAAAAGAGAAGAAGCCAATGATCGATTGTGAAATGGAAATAAATAATTGTATTGAGGATGTTCCTAACATTGTTGAAGATAAAGTTGATTCTGATGGCTTTCAGGAAGTTCGTTCAAAGAAAAACGTAAAAGAATCTAGACATGGCTCAAAAGAAGAGACAAAACCTGCAAAACGTGAAAAGGAAAAAGATAGAGAACGCGACCGTTCAAAGTCAAAAGCAAATGGTGGTTCGCAGCAAACTTCTTTGCAACAAGTACAAAATATACCGCCATTGCTTGGTCAAACCATTCCACAACCTACAAATATTTTACA] [+] EMBL BI513277 [GAAGAATCATTCCAACAATATTCCGCCGTTGATACAAACCACTCAAATACAAAATGGAAGATCGAGAAATCAAACTTCTGGAAATAGTTTATCGATTTCAAATAAATCGATAACAAAAGATACTACAGTGAATCGTTTAGATGAAATAAAATTAAGCGATTCTAATTTAGTTAGTCAAGCTCTTAATGATATTAATAAAAGATCCCAAGGAAAAGAGAAGAAGCCAATGATCGATTGTGAAATGGAAATAAATAATTGTATTGAGGATGTTCCTAACATTGTTGAAGATAAAGTTGATTCTGATGGCTTTCAGGAAGTTCGTTCAAAGAAAAACGTAAAAGAATCTAGACATGGCTCAAAAGAAGAGACAAAACCTGCAAAACGTGAAAAGGAAAAAGATAGAGAACGCGACCGTTCAAAGTCAAAAGCAAATGGTGGTTCGCAGCAAACTTCTTTGCAACAAGTACAAAATATACCGCCATTGCTTGGTCAAACCATTCCACAACCTACAAATATTTTACA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2383#0 AGCAAATGGTGGTTCGCAGCAAACTTCTTTGCAACAAGTACAAAATATACCGCCATTGCT 60 consensus_2383#1 -------------------------------------------------GAAGAATCATT 11 ** * consensus_2383#0 TGGTCAAACCATTCCACAACCTACAAATATTTTACAAAAACAATATGATAGAACTTCGAG 120 consensus_2383#1 CCAACAA--TATTCCGCCGTTGATACAAACCACTCAAATACAAAATGGAAGA---TCGAG 66 *** ***** * * * * * **** **** *** *** ***** consensus_2383#0 AAGTCAAAAACTTGCACCTAGATTCCAAAAACAGCGTTTAGCTAAACAACAGCAGCAGCA 180 consensus_2383#1 AAATCAAACTTCTGGAAATAGTTT-----ATCGATTTCAAATAAATCGATAACAAAAGAT 121 ** ***** ** * *** ** * * * * ** * * * ** ** consensus_2383#0 ACAACAACAACAACAGCAGCAGCAGCAACAACAACAACAAATATGCACATCCGATGCGAA 240 consensus_2383#1 ACTACAGTG--AATCGTT-TAGATGAAATAAAATTAAGCGAT-TCTAATTTAGTTAGTCA 177 ** *** ** * ** * ** ** * ** ** * * * * * * consensus_2383#0 TGATACAATCAAAATTAACAATTCATCAAATAATTTCGGTAAAGATTCATCAACTGGACC 300 consensus_2383#1 AGCTCTTAATGATATTAATAAAAGATCCCAAGGAAAAGAGAAGAAGCCAATGATCGATTG 237 * * * * ***** ** *** * * ** * ** * * consensus_2383#0 CGCACCTCCACCATCTGTGAATGCTTGGGATAAACCGTTCACTACGAGTCAGTTACAATC 360 consensus_2383#1 TGAAATGGAAATAAATAATTGTATTGAGGATGTTCCTAACATT--------GTTGAAGAT 289 * * * * * * * **** ** ** * *** * consensus_2383#0 AAATTCTCCATCAACAGTTTCTTCTGATATCCAATTGATATCAAGTTTGTCAACACAAAA 420 consensus_2383#1 AAAGTTGATTCTGATGGCTT-TCAGGAAGTTCGTTCAAAGAAAAACGT---AAAAGAATC 345 *** * * * ** * ** * * * * ** * ** * ** consensus_2383#0 TGAACATGGTCACGTTCATAGTCACGAAGTTAACGAACAAACAAATTCTGGTAATAGTAG 480 consensus_2383#1 TAGACATGGCT-CAAAAGAAGAGACAAAACCTGCAAAACGTGAAAAG--GAAAAAGATAG 402 * ****** * ** ** ** * ** *** * ** *** consensus_2383#0 TCAACGAAATTCACCAAGTGGTGAAAAAAATATTGGCTAAAGTTTGAAAGATCAACTTCT 540 consensus_2383#1 AGAACGCGACCGTTCAAAGTCAAAAGCAAATGGTG------GTTCGCAGCA--AACTTCT 454 **** * *** ** **** ** *** * * * ******* consensus_2383#0 A-GAAAAAAGTTCAGTTTCTGACGTATCTTCACCTCCTGTTCAAACGTTAATTTTTGAGA 599 consensus_2383#1 TTGCAACAAGTACAA-----AATATACCGCCATTGCTTGGTCAAAC---CATTCCACAAC 506 * ** **** ** * ** * ** * ** ****** *** * consensus_2383#0 ATACAAAT-------- 607 consensus_2383#1 CTACAAATATTTTACA 522 ******* |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |