These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2545#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 484 fasta sequence [GTGGAAATCGCGTGTGTTTCTGTTCAACAAACGTCGGGAAGCTTCGTAGCTATACACGCAATACACGCAATACGTACGCAATAGTGTAACGCGTAAAAAAAGATGGACGGTGCACGCAACCTGTTTCTATCTTCGCGTCGTTTGTGCGGTTTTAAAGTGTTTTGCGTTCGAACTTGCATGTGCGTATCATTTTTTCTGAAACGGGACACCTTATACCACAATATCTATTGCTACCCTCATCCTACAACGTGAAATCTTATTCCTAACAGGACAATCATCCCGGATTACGAACGGAAAGCGCGACGAATCCCTCTTTCAAGCTGCACCGTATGGTACAACCTGAGCGACATTTAACCGGAAACTTGATATCGGTGGACATTCACCGCCGTGAGCTCTTTCAATTGATCGTGGCCTACACGACAATGAGGATCAACTACGTCGAACAACATGGAGCGAGACGGCGATGCTGCTTCGGACGAACAGA] [+] EMBL BI514946 [GTGGAAATCGCGTGTGTTTCTGTTCAACAAACGTCGGGAAGCTTCGTAGCTATACACGCAATACACGCAATACGTACGCAATAGTGTAACGCGTAAAAAAAGATGGACGGTGCACGCAACCTGTTTCTATCTTCGCGTCGTTTGTGCGGTTTTAAAGTGTTTTGCGTTCGAACTTGCATGTGCGTATCATTTTTTCTGAAACGGGACACCTTATACCACAATATCTATTGCTACCCTCATCCTACAACGTGAAATCTTATTCCTAACAGGACAATCATCCCGGATTACGAACGGAAAGCGCGACGAATCCCTCTTTCAAGCTGCACCGTATGGTACAACCTGAGCGACATTTAACCGGAAACTTGATATCGGTGGACATTCACCGCCGTGAGCTCTTTCAATTGATCGTGGCCTACACGACAATGAGGATCAACTACGTCGAACAACATGGAGCGAGACGGCGATGCTGCTTCGGACGAACAGA] consensusID : consensus_2545#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 442 fasta sequence [TAGCTATACACGCAATACACGCAATACGTACGCAATAGTGTAACGCGTAAAAAAAGATGGACGGTGCACGCAACCTGTTTCTATCTTCGCGTCGTTTGTGCGGTTTTAAAGTGTTTTGCGTTCGAACTTGCATGACAATCATCCCGGATTACGAACGGAAAGCGCGACGAATCCCTCTTTCAAGCTGCACCGTATGGTACAACCTGAGCGACATTTAACCGGAAACTTGATATCGGTGGACATTCACCGCCGTGAGCTCTTTCAATTGATCGTGGCCTACACGACAATGAGGATCAACTACGTCGAACAACATGGAGCGAGACGGCGATGCTGCTTCGGACGAACAGATCGATTCTCCATCACGGAGGAGAAGGATGAAGAACGACGAGGGAGGGGTTCCACGGAGAAAAATCGAGGAAGAATCGGATAAAGGGACAACTCT] [+] EMBL BI512447 [TAGCTATACACGCAATACACGCAATACGTACGCAATAGTGTAACGCGTAAAAAAAGATGGACGGTGCACGCAACCTGTTTCTATCTTCGCGTCGTTTGTGCGGTTTTAAAGTGTTTTGCGTTCGAACTTGCATGACAATCATCCCGGATTACGAACGGAAAGCGCGACGAATCCCTCTTTCAAGCTGCACCGTATGGTACAACCTGAGCGACATTTAACCGGAAACTTGATATCGGTGGACATTCACCGCCGTGAGCTCTTTCAATTGATCGTGGCCTACACGACAATGAGGATCAACTACGTCGAACAACATGGAGCGAGACGGCGATGCTGCTTCGGACGAACAGATCGATTCTCCATCACGGAGGAGAAGGATGAAGAACGACGAGGGAGGGGTTCCACGGAGAAAAATCGAGGAAGAATCGGATAAAGGGACAACTCT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2545#0 GTGGAAATCGCGTGTGTTTCTGTTCAACAAACGTCGGGAAGCTTCGTAGCTATACACGCA 60 consensus_2545#1 ----------------------------------------------TAGCTATACACGCA 14 ************** consensus_2545#0 ATACACGCAATACGTACGCAATAGTGTAACGCGTAAAAAAAGATGGACGGTGCACGCAAC 120 consensus_2545#1 ATACACGCAATACGTACGCAATAGTGTAACGCGTAAAAAAAGATGGACGGTGCACGCAAC 74 ************************************************************ consensus_2545#0 CTGTTTCTATCTTCGCGTCGTTTGTGCGGTTTTAAAGTGTTTTGCGTTCGAACTTGCATG 180 consensus_2545#1 CTGTTTCTATCTTCGCGTCGTTTGTGCGGTTTTAAAGTGTTTTGCGTTCGAACTTGCATG 134 ************************************************************ consensus_2545#0 TGCGTATCATTTTTTCTGAAACGGGACACCTTATACCACAATATCTATTGCTACCCTCAT 240 consensus_2545#1 ------------------------------------------------------------ consensus_2545#0 CCTACAACGTGAAATCTTATTCCTAACAGGACAATCATCCCGGATTACGAACGGAAAGCG 300 consensus_2545#1 ------------------------------ACAATCATCCCGGATTACGAACGGAAAGCG 164 ****************************** consensus_2545#0 CGACGAATCCCTCTTTCAAGCTGCACCGTATGGTACAACCTGAGCGACATTTAACCGGAA 360 consensus_2545#1 CGACGAATCCCTCTTTCAAGCTGCACCGTATGGTACAACCTGAGCGACATTTAACCGGAA 224 ************************************************************ consensus_2545#0 ACTTGATATCGGTGGACATTCACCGCCGTGAGCTCTTTCAATTGATCGTGGCCTACACGA 420 consensus_2545#1 ACTTGATATCGGTGGACATTCACCGCCGTGAGCTCTTTCAATTGATCGTGGCCTACACGA 284 ************************************************************ consensus_2545#0 CAATGAGGATCAACTACGTCGAACAACATGGAGCGAGACGGCGATGCTGCTTCGGACGAA 480 consensus_2545#1 CAATGAGGATCAACTACGTCGAACAACATGGAGCGAGACGGCGATGCTGCTTCGGACGAA 344 ************************************************************ consensus_2545#0 CAGA-------------------------------------------------------- 484 consensus_2545#1 CAGATCGATTCTCCATCACGGAGGAGAAGGATGAAGAACGACGAGGGAGGGGTTCCACGG 404 **** consensus_2545#0 -------------------------------------- consensus_2545#1 AGAAAAATCGAGGAAGAATCGGATAAAGGGACAACTCT 442 |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |