These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2604#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 518 fasta sequence [TAATGGCATAGAATATGATTATGTGTTTTCAGTGGATATACAAGATGGTATTCCTCCATTAAAATTACCTTATAATAATGATCAGGATCCTTGGCATGTTGCCCAGAAGTTCCTTCATGATAATGGTCTTAGTCAATTGTTTCTAGATCAGGTTGCAAATTTTATAATAAAAAATTCTGAATCTGCACCAGTTTTGAAAACTGATGCTCAATATGCTGATCCTTTCACAGGAGGCAGTAGGTACATTCCACAGTCGACAACAAATACAGTTTCGCACGAATTCACGAGATCAACAGCATCAAATTCTTCAGACGCATCTGTACCTTCTTATATACCTCATACAAAATACTTGAAATTGGAACAAGCTAATCTTTCTCAAATTTTAGAAAAGATAAAAGAATTAAATACTAAACAAAATGATCCTTTTAAAGTACCAAATGATAAATTGGAATCTTTGGTGAAACTTGCTGGTGATCAAGCTTCTGAGCAATTAAAAACTGATGCTTTAAGCACTTTGA] [+] EMBL BI512380 [TAATGGCATAGAATATGATTATGTGTTTTCAGTGGATATACAAGATGGTATTCCTCCATTAAAATTACCTTATAATAATGATCAGGATCCTTGGCATGTTGCCCAGAAGTTCCTTCATGATAATGGTCTTAGTCAATTGTTTCTAGATCAGGTTGCAAATTTTATAATAAAAAATTCTGAATCTGCACCAGTTTTGAAAACTGATGCTCAATATGCTGATCCTTTCACAGGAGGCAGTAGGTACATTCCACAGTCGACAACAAATACAGTTTCGCACGAATTCACGAGATCAACAGCATCAAATTCTTCAGACGCATCTGTACCTTCTTATATACCTCATACAAAATACTTGAAATTGGAACAAGCTAATCTTTCTCAAATTTTAGAAAAGATAAAAGAATTAAATACTAAACAAAATGATCCTTTTAAAGTACCAAATGATAAATTGGAATCTTTGGTGAAACTTGCTGGTGATCAAGCTTCTGAGCAATTAAAAACTGATGCTTTAAGCACTTTGA] consensusID : consensus_2604#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 240 fasta sequence [TATTTCATTTATAATGATAGAATTAATTAACGAATTGTTTAAAATATTTGTTTAAAATATTTTTTTGTAGAAAAGATAAAAGAATTAAATACTAAACAAAATGATCCTTTTAAAGTACCAAATGATAAATTGGAATCTTTGGTGAAACTTGCTGGTGATCAAGCTTCTGAGCAATTAAAAACTGATGCTTTAAGCACTTTGAAAATACTTTTAAACTGGTCAGATGATATATTATTTCCT] [+] EMBL BI515324 [TATTTCATTTATAATGATAGAATTAATTAACGAATTGTTTAAAATATTTGTTTAAAATATTTTTTTGTAGAAAAGATAAAAGAATTAAATACTAAACAAAATGATCCTTTTAAAGTACCAAATGATAAATTGGAATCTTTGGTGAAACTTGCTGGTGATCAAGCTTCTGAGCAATTAAAAACTGATGCTTTAAGCACTTTGAAAATACTTTTAAACTGGTCAGATGATATATTATTTCCT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2604#0 TAATGGCATAGAATATGATTATGTGTTTTCAGTGGATATACAAGATGGTATTCCTCCATT 60 consensus_2604#1 ------------------------------------------------------------ consensus_2604#0 AAAATTACCTTATAATAATGATCAGGATCCTTGGCATGTTGCCCAGAAGTTCCTTCATGA 120 consensus_2604#1 ------------------------------------------------------------ consensus_2604#0 TAATGGTCTTAGTCAATTGTTTCTAGATCAGGTTGCAAATTTTATAATAAAAAATTCTGA 180 consensus_2604#1 ------------------------------------------------------------ consensus_2604#0 ATCTGCACCAGTTTTGAAAACTGATGCTCAATATGCTGATCCTTTCACAGGAGGCAGTAG 240 consensus_2604#1 ------------------------------------------------------------ consensus_2604#0 GTACATTCCACAGTCGACAACAAATACAGTTTCGCACGAATTCACGAGATCAACAGCATC 300 consensus_2604#1 ------------------------------------------------------------ consensus_2604#0 AAATTCTTCAGACGCATCT-GTACCTTCTTATATACCTCAT--ACAAAATACTTGAAATT 357 consensus_2604#1 --------------TATTTCATTTATAATGATAGAATTAATTAACGAATTGTTTAAAAT- 45 ** * * * * *** * * ** ** ** * ** **** consensus_2604#0 GGAACAAGCTAATCTTTCTCAAATTTTAGAAAAGATAAAAGAATTAAATACTAAACAAAA 417 consensus_2604#1 --ATTTGTTTAAAATATTTT--TTTGTAGAAAAGATAAAAGAATTAAATACTAAACAAAA 101 * *** * * * ** ********************************** consensus_2604#0 TGATCCTTTTAAAGTACCAAATGATAAATTGGAATCTTTGGTGAAACTTGCTGGTGATCA 477 consensus_2604#1 TGATCCTTTTAAAGTACCAAATGATAAATTGGAATCTTTGGTGAAACTTGCTGGTGATCA 161 ************************************************************ consensus_2604#0 AGCTTCTGAGCAATTAAAAACTGATGCTTTAAGCACTTTGA------------------- 518 consensus_2604#1 AGCTTCTGAGCAATTAAAAACTGATGCTTTAAGCACTTTGAAAATACTTTTAAACTGGTC 221 ***************************************** consensus_2604#0 ------------------- consensus_2604#1 AGATGATATATTATTTCCT 240 |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |