These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2748#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 412 fasta sequence [AAAAAAGTGGAATCAAAATTATTGGAAAATTGAACTTCGATTACCATTTGAAAGTATTNNNCTTTTTCAATTGTTTAATTTTGTTTCAACGAGCGAAACAAATTCTCCGTGATAATGACGAAAGATAAACAATCTTGAAGGAAGAAAAGGAGAGAGGACCTTGGAAACGTGTAATGATTTTTTTTTCTTGTAGAGATTGAAAAAGTATATTGATAAAATTTCGAAGCTGATACAAACGGAGTGCATCCATTTATTGTAACTGATTATAGATTTGAAAGACGAAGTTCAGAAATAGAAAAAAAAAGAAAAAAGGGTTCTACGAGCAACGTCGTCGGGAAGACTTGGAGCTTCCGGGTACACACACGTTTGATAACGATTCACGAGGGTTGTAGGGGTTGGTGCTGCCATTATG] [-] EMBL BI514708 [AAAAAAGTGGAATCAAAATTATTGGAAAATTGAACTTCGATTACCATTTGAAAGTATTNNNCTTTTTCAATTGTTTAATTTTGTTTCAACGAGCGAAACAAATTCTCCGTGATAATGACGAAAGATAAACAATCTTGAAGGAAGAAAAGGAGAGAGGACCTTGGAAACGTGTAATGATTTTTTTTTCTTGTAGAGATTGAAAAAGTATATTGATAAAATTTCGAAGCTGATACAAACGGAGTGCATCCATTTATTGTAACTGATTATAGATTTGAAAGACGAAGTTCAGAAATAGAAAAAAAAAGAAAAAAGGGTTCTACGAGCAACGTCGTCGGGAAGACTTGGAGCTTCCGGGTACACACACGTTTGATAACGATTCACGAGGGTTGTAGGGGTTGGTGCTGCCATTATG] consensusID : consensus_2748#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 412 fasta sequence [TTAAAACAGAGATTGTCGTTCGAGAAACATCGAAGGGATCGACGAAGAGAGAAAAAGAAAAAAAAAGAAAAAAGGGTTCTACGAGCAACGTCGTCGGGAAGACTTGGAGCTTCCGGGTACACACACGTTTGATAACGATTCACGAGGGTTGTAGGGGTTGGTGCTGCCATTATGGATTATATTGGCGATCGAACGAACGAGAGAAAAAAGAAAGAAAAAAAAAGAAAGGATGTCTGTAGTAGGGCCTAAGCACGAGTATCGAAAGAGGAGAAAAATGAAATATAGGACGGTGTATCATCATCATCATCGAGGAGATGAGAATAACAGGTGAGAGGAAGGTACGAGTATTGGCAGAGGACACCCGTGTATCTTTTTTTTTGGAAAAGGGAGGGCGACAAATCGTCGGATAACG] [+] EMBL BI511325 [TTAAAACAGAGATTGTCGTTCGAGAAACATCGAAGGGATCGACGAAGAGAGAAAAAGAAAAAAAAAGAAAAAAGGGTTCTACGAGCAACGTCGTCGGGAAGACTTGGAGCTTCCGGGTACACACACGTTTGATAACGATTCACGAGGGTTGTAGGGGTTGGTGCTGCCATTATGGATTATATTGGCGATCGAACGAACGAGAGAAAAAAGAAAGAAAAAAAAAGAAAGGATGTCTGTAGTAGGGCCTAAGCACGAGTATCGAAAGAGGAGAAAAATGAAATATAGGACGGTGTATCATCATCATCATCGAGGAGATGAGAATAACAGGTGAGAGGAAGGTACGAGTATTGGCAGAGGACACCCGTGTATCTTTTTTTTTGGAAAAGGGAGGGCGACAAATCGTCGGATAACG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2748#0 --------------------------------------------AAAAAAGTGGAATCAA 16 consensus_2748#1 TTAAAACAGAGATTGTCGTTCGAGAAACATCGAAGGGATCGACGAAGAGAGAAAAAGAAA 60 ** * ** ** ** consensus_2748#0 AATTATTGGAAAATTGAACTTCGATTACCAT--TTGAAAGTATTNNNCTTTTTCAATTGT 74 consensus_2748#1 AAAAAAGAAAAAAGGGTTCTACGAGCAACGTCGTCGGGAAGACTTGGAGCTTCCGGGTAC 120 ** * **** * ** *** * * * * * * * * ** * * consensus_2748#0 TTAATTTTGTTTCAACGAGCGAAACAAATTCTCCGTGATAATGACGAAAG-ATAAACAAT 133 consensus_2748#1 ACACACGTTTGATAACGATTCACGAGGGTTGTAGGGGTTGGTGCTGCCATTATGGATTAT 180 * * * ***** * ** * * * * ** * * ** * ** consensus_2748#0 CTTGAAGGAAGAA--AAGGAGAGAGGACCTTGGAAACGTGTAATGATTTTTTTTTCTTGT 191 consensus_2748#1 ATTGGCGATCGAACGAACGAGAGAAAAAAGAAAGAAAAAAAAAGAAAGGATGTCTGTAGT 240 *** * *** ** ****** * ** ** * * * * * ** consensus_2748#0 AGAGATTGAAAAAGTATATTGATAAAATTTCGAAGCTGATACAAACGGAGTGCATCCATT 251 consensus_2748#1 AGGGCCTAAGCACGAGTATCGA-AAGAGGAGAAAAATGAAATATA-GGACGGTGTATCAT 298 ** * * * * * *** ** ** * ** *** * * * *** * * * consensus_2748#0 TATTGTAACTGATTATAGATTTGAAAGACGAAGTTCAGAAATAGAAAAAAAAAGAAAAAA 311 consensus_2748#1 CATCATCATCGA--GGAGATGAGAATAAC--AGGTGAGAGGAAGGTACGAGTATTGGCAG 354 ** * * ** **** *** ** ** * *** ** * * * * consensus_2748#0 GGGTTCTACGAGCAACGTCGTCGGGAAGACTTGGAGCTTCCGGGTACACACACGTTTGAT 371 consensus_2748#1 AGGACACCCGTGTATCTTTTTTTTTGGAAAAGGGAG-----GGCGACAAAT-CGTCGGAT 408 ** ** * * * * * * **** ** *** * *** *** consensus_2748#0 AACGATTCACGAGGGTTGTAGGGGTTGGTGCTGCCATTATG 412 consensus_2748#1 AACG------------------------------------- 412 **** |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |