These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2813#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 200 fasta sequence [CAGCAGTCATTTCTCTTCCATCTATTCCAGAAATACATTCTTTCTGTTCCATAATAGTTATAACCACCACGTTCTAACAATTTTCCAAAATATTCAACTGCAGTTTCGTCTTCGTTAAATCTAAATGATGTTGCATCATGTACCAATCCATGTATGGCTGCTGATTTTCCAGCCATTAATTCAATCATCATAGCTATTGT] [+] EMBL BG101532 [CAGCAGTCATTTCTCTTCCATCTATTCCAGAAATACATTCTTTCTGTTCCATAATAGTTATAACCACCACGTTCTAACAATTTTCCAAAATATTCAACTGCAGTTTCGTCTTCGTTAAATCTAAATGATGTTGCATCATGTACCAATCCATGTATGGCTGCTGATTTTCCAGCCATTAATTCAATCATCATAGCTATTGT] consensusID : consensus_2813#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 193 fasta sequence [ATTNTCTCTNCCATCTATATCCAGATTACNTTCTTTNTNNNCCATAGTANGTATANGCACCACNNACTNNCAGNTCTCCAAAATATTNAACGTGCAGTTTCGTCTTCNTTAAATCTAAATGATGTTGCATCATGTACCAATCCATGTATGGCTGCTGATTTTCCAGCCATTAATTCAATCATCATAGCTATTG] [+] EMBL BG101670 [ATTNTCTCTNCCATCTATATCCAGATTACNTTCTTTNTNNNCCATAGTANGTATANGCACCACNNACTNNCAGNTCTCCAAAATATTNAACGTGCAGTTTCGTCTTCNTTAAATCTAAATGATGTTGCATCATGTACCAATCCATGTATGGCTGCTGATTTTCCAGCCATTAATTCAATCATCATAGCTATTG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2813#0 CAGCAGTCATTTCTCTTCCATCTATTCCAGAAATACATTCTTTCTGTTCCATAATAGTTA 60 consensus_2813#1 -------ATTNTCTCTNCCATCTATATCCAGATTACNTTCTTTNTNNNCCATAGTANGTA 53 * ***** ******** * * *** ****** * ***** ** ** consensus_2813#0 TAACCACCACGTTCTAACAATTTTCCAAAATATTCAAC-TGCAGTTTCGTCTTCGTTAAA 119 consensus_2813#1 TANGCACCACNNACTNNCAGNTCTCCAAAATATTNAACGTGCAGTTTCGTCTTCNTTAAA 113 ** ****** ** ** * *********** *** *************** ***** consensus_2813#0 TCTAAATGATGTTGCATCATGTACCAATCCATGTATGGCTGCTGATTTTCCAGCCATTAA 179 consensus_2813#1 TCTAAATGATGTTGCATCATGTACCAATCCATGTATGGCTGCTGATTTTCCAGCCATTAA 173 ************************************************************ consensus_2813#0 TTCAATCATCATAGCTATTGT 200 consensus_2813#1 TTCAATCATCATAGCTATTG- 193 ******************** |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |