These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2853#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 507 fasta sequence [TATATTATAATTGTTGTAAAACTAAAACACGTGGATTAGAATCAATTGCTGAAATGAATCTTGTTGGAAAAAAGCATAAAGAATTGGAATATGATCTACCAGGATATCCTAAAGCAACATTTTTAATGGTTTTCAGTCCTGATGGCACAAAAATAGCATCAGCACATGGAAACCATAGTGTTTATATTACTGATGTAGCTACTAGGAAAAATATTAAAATTCTTTCTGGTCATCCACGTACTCCATGNNNTATCACATTTCATCCATCCTCTAGTCACATATTAGCTTCTGGTTGTCTTGGNGGTCAAGTTCGAGTTTGGGATTTAAGGGATGGTAGTAAAGTTTGGAATGCAGAAAGTCAAACAGTCATAGCTTCTCTTGCTTTCCATCCATTTGAAAAGTTACTTGTTATAGCAACAAATAATGAAATACATTTTTGGGATTGGAGTCGATCTGAACCCTTTGCAGTTATATCTACTAAAACTAACATAGAAAAAGTAAGATATG] [+] EMBL BI512983 [TATATTATAATTGTTGTAAAACTAAAACACGTGGATTAGAATCAATTGCTGAAATGAATCTTGTTGGAAAAAAGCATAAAGAATTGGAATATGATCTACCAGGATATCCTAAAGCAACATTTTTAATGGTTTTCAGTCCTGATGGCACAAAAATAGCATCAGCACATGGAAACCATAGTGTTTATATTACTGATGTAGCTACTAGGAAAAATATTAAAATTCTTTCTGGTCATCCACGTACTCCATGNNNTATCACATTTCATCCATCCTCTAGTCACATATTAGCTTCTGGTTGTCTTGGNGGTCAAGTTCGAGTTTGGGATTTAAGGGATGGTAGTAAAGTTTGGAATGCAGAAAGTCAAACAGTCATAGCTTCTCTTGCTTTCCATCCATTTGAAAAGTTACTTGTTATAGCAACAAATAATGAAATACATTTTTGGGATTGGAGTCGATCTGAACCCTTTGCAGTTATATCTACTAAAACTAACATAGAAAAAGTAAGATATG] consensusID : consensus_2853#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 485 fasta sequence [TTTTTTTTACAATTGTTGTAAAACTAAAACACGTGGATTAGAATCAATTGCTGAAATGAATCTTGTTGGAAAAAAGCATAAAGAATTGGAATATGATCTACCAGGATATCCTAAAGCAACATTTTTAATGGTTTTCAGTCCTGATGGCACAAAAATAGCATCAGCACATGGAAACCATAGTGTTTATATTACTGATGTAGCTACTAGGAAAAATATTAAAATTCTTTCTGGTCATCCACGTACTCCATGGTGTATCACATTTCATCCATCCTCTAGTCACATATTAGCTTCTGGTTGTCTTGGTGGTCAAGTTCGAGTTTGGGATTTAAGGGTGTATATATGTGATTATTATATTTGTAACATCAAATATAATATATATTTGTAAATATCAGAAATACAAAAAAGTGTTTCAAACAAAAATTATATCAAAGAGTATATATTGTGATGATAAATATTTAATCTTAATCTGTGGATTTGGAAATTGT] [-] EMBL BI510670 [TTTTTTTTACAATTGTTGTAAAACTAAAACACGTGGATTAGAATCAATTGCTGAAATGAATCTTGTTGGAAAAAAGCATAAAGAATTGGAATATGATCTACCAGGATATCCTAAAGCAACATTTTTAATGGTTTTCAGTCCTGATGGCACAAAAATAGCATCAGCACATGGAAACCATAGTGTTTATATTACTGATGTAGCTACTAGGAAAAATATTAAAATTCTTTCTGGTCATCCACGTACTCCATGGTGTATCACATTTCATCCATCCTCTAGTCACATATTAGCTTCTGGTTGTCTTGGTGGTCAAGTTCGAGTTTGGGATTTAAGGGTGTATATATGTGATTATTATATTTGTAACATCAAATATAATATATATTTGTAAATATCAGAAATACAAAAAAGTGTTTCAAACAAAAATTATATCAAAGAGTATATATTGTGATGATAAATATTTAATCTTAATCTGTGGATTTGGAAATTGT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2853#0 --TATATTATAATTGTTGTAAAACTAAAACACGTGGATTAGAATCAATTGCTGAAATGAA 58 consensus_2853#1 TTTTTTTTACAATTGTTGTAAAACTAAAACACGTGGATTAGAATCAATTGCTGAAATGAA 60 * * *** ************************************************** consensus_2853#0 TCTTGTTGGAAAAAAGCATAAAGAATTGGAATATGATCTACCAGGATATCCTAAAGCAAC 118 consensus_2853#1 TCTTGTTGGAAAAAAGCATAAAGAATTGGAATATGATCTACCAGGATATCCTAAAGCAAC 120 ************************************************************ consensus_2853#0 ATTTTTAATGGTTTTCAGTCCTGATGGCACAAAAATAGCATCAGCACATGGAAACCATAG 178 consensus_2853#1 ATTTTTAATGGTTTTCAGTCCTGATGGCACAAAAATAGCATCAGCACATGGAAACCATAG 180 ************************************************************ consensus_2853#0 TGTTTATATTACTGATGTAGCTACTAGGAAAAATATTAAAATTCTTTCTGGTCATCCACG 238 consensus_2853#1 TGTTTATATTACTGATGTAGCTACTAGGAAAAATATTAAAATTCTTTCTGGTCATCCACG 240 ************************************************************ consensus_2853#0 TACTCCATGNNNTATCACATTTCATCCATCCTCTAGTCACATATTAGCTTCTGGTTGTCT 298 consensus_2853#1 TACTCCATGGTGTATCACATTTCATCCATCCTCTAGTCACATATTAGCTTCTGGTTGTCT 300 ********* ************************************************ consensus_2853#0 TGGNGGTCAAGTTCGAGTTTGGGATTTAAGGGATGGTA-GTAAAGTT-TGGAATGCAGAA 356 consensus_2853#1 TGGTGGTCAAGTTCGAGTTTGGGATTTAAGGGTGTATATATGTGATTATTATATTTGTAA 360 *** **************************** ** * ** * ** ** consensus_2853#0 AGTCAAACAGTCATAGCTTCTCTTGCTTTCCATCCATTTGAAAAGTTACTTGTTATAGCA 416 consensus_2853#1 CATCAAATA-TAATATATATTTGTAAATATCAGAAATACAAAAAAGTGTTTCAAACAAAA 419 ***** * * *** * * * * ** ** **** * ** * * * consensus_2853#0 ACAA-ATAATGAAATACATTTTTGGGATTGGAGTCGATCTGAACCCTTTGCAGTTATATC 475 consensus_2853#1 ATTATATCAAAGAGTATATATT-GTGAT---GATAAATATTTAATCTTAATCTGTGGATT 475 * * ** * * ** ** ** * *** * ** * * *** * ** consensus_2853#0 TACTAAAACTAACATAGAAAAAGTAAGATATG 507 consensus_2853#1 TG--GAAATTGT-------------------- 485 * *** * |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |