These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2910#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 419 fasta sequence [CCTCGAGCAATCTGAAATTAAAATGCCGATCGATTTTTATCAACTTCCCGGAAGTCCTCCGTGCCGCGCAGTTGCGTTGACGGCTGCCGCTCTCGACATCGAGATGAATTTCAAACAGGTCAATTTGATGAACGGGGAACACTTGAAGCCTGAATTTTTAAAGATAAACCCGCAACACACGATACCCACGATTGATGACAATGGTTTCCGTCTGTGGGAAAGCCGAGCCATCATGACGTACTTGGCGGACCAATACGGCAAAAATGACACTCTGTACCCGAAGGATCTGAAGAAACGGGCGATCGTCAATCAAAGATTGTACTTCGACATGTGCAGTTTATACAAATCGTTCATGGATTATTACTATCCAATCATTTTCATGAAAGCGGTTAAAGATCAAGCGAAATACGAAAACATCG] [+] EMBL BE844335 [CCTCGAGCAATCTGAAATTAAAATGCCGATCGATTTTTATCAACTTCCCGGAAGTCCTCCGTGCCGCGCAGTTGCGTTGACGGCTGCCGCTCTCGACATCGAGATGAATTTCAAACAGGTCAATTTGATGAACGGGGAACACTTGAAGCCTGAATTTTTAAAGATAAACCCGCAACACACGATACCCACGATTGATGACAATGGTTTCCGTCTGTGGGAAAGCCGAGCCATCATGACGTACTTGGCGGACCAATACGGCAAAAATGACACTCTGTACCCGAAGGATCTGAAGAAACGGGCGATCGTCAATCAAAGATTGTACTTCGACATGTGCAGTTTATACAAATCGTTCATGGATTATTACTATCCAATCATTTTCATGAAAGCGGTTAAAGATCAAGCGAAATACGAAAACATCG] consensusID : consensus_2910#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 274 fasta sequence [GAGAGGTATGGTGGATCAAAATGCTGTATTTTGACATAGGTATCCTTAACGAGAACGTGGTTAAATGTTACTACTCGCCAACATTTTTGAAGGCGCATTCCTTGGACGAGGAGAGGTGTGGAGAGATAGTGCGAGATGTTGAACGCGTTTCTCAACGATCGCGAGTACGTTGCCGGCGACACGCTTACCGTTGCTGATTTTGCCATCCACACGACCATTTGCGTCTCCGTTGAAATTAAAATGCCGATCGATTTTTATCAACTTCCCGGAAGTC] [+] EMBL BI505785 [GAGAGGTATGGTGGATCAAAATGCTGTATTTTGACATAGGTATCCTTAACGAGAACGTGGTTAAATGTTACTACTCGCCAACATTTTTGAAGGCGCATTCCTTGGACGAGGAGAGGTGTGGAGAGATAGTGCGAGATGTTGAACGCGTTTCTCAACGATCGCGAGTACGTTGCCGGCGACACGCTTACCGTTGCTGATTTTGCCATCCACACGACCATTTGCGTCTCCGTTGAAATTAAAATGCCGATCGATTTTTATCAACTTCCCGGAAGTC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2910#0 CCTCGAGCAATCTGAAATTAAAATGCCGATCGATTTTTATCAACTTCCCGGAAGTCCTCC 60 consensus_2910#1 ------------------------------------------------------------ consensus_2910#0 GTGCCGCGCAGTTGCGTTGACGGCTGCCGCTCTCGACATCGAGATGAATTTCAAACAGGT 120 consensus_2910#1 ------------------------------------------------------------ consensus_2910#0 CAATTTGATGAACGGGGAACACTTGAAGCCTGAATTTTTAAAGATAAACCCGCAACACAC 180 consensus_2910#1 ------GAGAGGTATGGTGGATCAAAATGCTGTATTTTGACATAGGTATCCTTAACG-AG 53 ** ** * ** *** ***** * * * * ** *** * consensus_2910#0 GATACCCACGATTGATGACAATGGTTTCCGTCTGTGGGAAAGCCGAGCCATCATGACGTA 240 consensus_2910#1 AACGTGGTTAAATGTTACTACTCGCCAACATTTTTGAAGGCGCATTCCTTGGACGAGGAG 113 * * ** * * * * * * * ** ** * * ** * consensus_2910#0 CTTGGCGGACCAATACGGCAAAAATGACACTCTGTACCCGAAGGATCTGAAGAAACGGGC 300 consensus_2910#1 AGGTGTGGAGAGATAGTGCGAGATGTTGAACGCGTTTCTCAACGATCGCGAGTACGTTGC 173 * *** *** ** * * * ** * ** **** ** * ** consensus_2910#0 GATCGTCA-ATCAAAGATTGT--ACTTCGACATGTGCA-GTTTATACAAATCGTTCATGG 356 consensus_2910#1 CGGCGACACGCTTACCGTTGCTGATTTTGCCATCCACACGACCATTTGCGTCTCCGTTGA 233 ** ** * *** * ** * *** ** * ** ** ** consensus_2910#0 ATTATTACTATCCAATCATTTTCATGAAAGCGGTTAAAGATCAAGCGAAATACGAAAACA 416 consensus_2910#1 AATTAAAATGCCGATCGATTTTTATCAACTTCCCGGAAGTC------------------- 274 * * * * * * ***** ** ** *** consensus_2910#0 TCG 419 consensus_2910#1 --- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |