These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2932#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 543 fasta sequence [CATTTACTTGTAAATAGTGTATAATGATTCGAAAAAGTCTATATCATATATTAGATATAAAAAAATTATCAATTATTAATATAATTTAACACACATATTTTTAGGAATTAAGGAACGTAACGAATAGTATTTTTTGTCTAATATGAGAAAGCAATTTTTAGAGAAATGCCTGATTGTAGAGCAAAAAACAACGTATTTTTAATAAGTTATTAGTTGTGTGCGCGCGCGACTCTTTTGTATACAAGGTGTACCTGAATGAGTGAGCGAGTGAAAAATGTATGTGTATAATCTTTGTGTAAAGAAAATTTCAATATCGTTTAAATCAAAATGGTTTAAACGAAGTTTTCGAGATTTGTTTTATTTATAAAAACGTTGATCGTCGTTTGTTTTGAAATTTATGTACGTGTTCTACGTATGTTGTGTGCACGCGCGCATACTCTTTACGCGCGCGCGGTATCAATACAGTAATAATACTACATGAAGTAGNGGATGTTCTTTTAATTATAAAAATATAGTTGATTATACTTTACATGGTCTGTTATT] [+] EMBL BI511005 [CATTTACTTGTAAATAGTGTATAATGATTCGAAAAAGTCTATATCATATATTAGATATAAAAAAATTATCAATTATTAATATAATTTAACACACATATTTTTAGGAATTAAGGAACGTAACGAATAGTATTTTTTGTCTAATATGAGAAAGCAATTTTTAGAGAAATGCCTGATTGTAGAGCAAAAAACAACGTATTTTTAATAAGTTATTAGTTGTGTGCGCGCGCGACTCTTTTGTATACAAGGTGTACCTGAATGAGTGAGCGAGTGAAAAATGTATGTGTATAATCTTTGTGTAAAGAAAATTTCAATATCGTTTAAATCAAAATGGTTTAAACGAAGTTTTCGAGATTTGTTTTATTTATAAAAACGTTGATCGTCGTTTGTTTTGAAATTTATGTACGTGTTCTACGTATGTTGTGTGCACGCGCGCATACTCTTTACGCGCGCGCGGTATCAATACAGTAATAATACTACATGAAGTAGNGGATGTTCTTTTAATTATAAAAATATAGTTGATTATACTTTACATGGTCTGTTATT] consensusID : consensus_2932#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 413 fasta sequence [TTGTCTAATATGAGAAAGCAATTTTTAGAGAAATGCCTGATTGTAGAGCAAAAAACAACGTATTTTTAATAAGTTATTAGTTGTGTGCGCGCGCGACTCTTTTGTATACAAGGTGTACCTGAATGAGTGAGCGAGTGAAAAATGTATGTGTATAATCTTTGTGTAAAGAAAATTTCAATATCGTTTAAATCAAAATGGTTTAAACGAAGTTTTCGAGATTTGTTTTATTTATAAAAACGTTGATCGTCGTTTGTTTTGAAATTTATGTACGTGTTCTACGTATGTTGTGTGCACGCGCGCATACTCTTTACGCGCGCGCGGTATCAATACAGTAATAATACTACATGAAGTAGAGGATGTTCTTTTAATTATAAAAATATAGTTGATTATACTTTAAAAAAAAAAAAAAAAAA] [+] EMBL BI508060 [TTGTCTAATATGAGAAAGCAATTTTTAGAGAAATGCCTGATTGTAGAGCAAAAAACAACGTATTTTTAATAAGTTATTAGTTGTGTGCGCGCGCGACTCTTTTGTATACAAGGTGTACCTGAATGAGTGAGCGAGTGAAAAATGTATGTGTATAATCTTTGTGTAAAGAAAATTTCAATATCGTTTAAATCAAAATGGTTTAAACGAAGTTTTCGAGATTTGTTTTATTTATAAAAACGTTGATCGTCGTTTGTTTTGAAATTTATGTACGTGTTCTACGTATGTTGTGTGCACGCGCGCATACTCTTTACGCGCGCGCGGTATCAATACAGTAATAATACTACATGAAGTAGAGGATGTTCTTTTAATTATAAAAATATAGTTGATTATACTTTAAAAAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2932#0 CATTTACTTGTAAATAGTGTATAATGATTCGAAAAAGTCTATATCATATATTAGATATAA 60 consensus_2932#1 ------------------------------------------------------------ consensus_2932#0 AAAAATTATCAATTATTAATATAATTTAACACACATATTTTTAGGAATTAAGGAACGTAA 120 consensus_2932#1 ------------------------------------------------------------ consensus_2932#0 CGAATAGTATTTTTTGTCTAATATGAGAAAGCAATTTTTAGAGAAATGCCTGATTGTAGA 180 consensus_2932#1 -------------TTGTCTAATATGAGAAAGCAATTTTTAGAGAAATGCCTGATTGTAGA 47 *********************************************** consensus_2932#0 GCAAAAAACAACGTATTTTTAATAAGTTATTAGTTGTGTGCGCGCGCGACTCTTTTGTAT 240 consensus_2932#1 GCAAAAAACAACGTATTTTTAATAAGTTATTAGTTGTGTGCGCGCGCGACTCTTTTGTAT 107 ************************************************************ consensus_2932#0 ACAAGGTGTACCTGAATGAGTGAGCGAGTGAAAAATGTATGTGTATAATCTTTGTGTAAA 300 consensus_2932#1 ACAAGGTGTACCTGAATGAGTGAGCGAGTGAAAAATGTATGTGTATAATCTTTGTGTAAA 167 ************************************************************ consensus_2932#0 GAAAATTTCAATATCGTTTAAATCAAAATGGTTTAAACGAAGTTTTCGAGATTTGTTTTA 360 consensus_2932#1 GAAAATTTCAATATCGTTTAAATCAAAATGGTTTAAACGAAGTTTTCGAGATTTGTTTTA 227 ************************************************************ consensus_2932#0 TTTATAAAAACGTTGATCGTCGTTTGTTTTGAAATTTATGTACGTGTTCTACGTATGTTG 420 consensus_2932#1 TTTATAAAAACGTTGATCGTCGTTTGTTTTGAAATTTATGTACGTGTTCTACGTATGTTG 287 ************************************************************ consensus_2932#0 TGTGCACGCGCGCATACTCTTTACGCGCGCGCGGTATCAATACAGTAATAATACTACATG 480 consensus_2932#1 TGTGCACGCGCGCATACTCTTTACGCGCGCGCGGTATCAATACAGTAATAATACTACATG 347 ************************************************************ consensus_2932#0 AAGTAGNGGATGTTCTTTTAATTATAAAAATATAGTTGATTATACTTTACATGGTCTGTT 540 consensus_2932#1 AAGTAGAGGATGTTCTTTTAATTATAAAAATATAGTTGATTATACTTTAAAAAAAAAAAA 407 ****** ****************************************** * consensus_2932#0 ATT--- 543 consensus_2932#1 AAAAAA 413 * |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |