These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2948#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 539 fasta sequence [TCCAAATATCCAATATTGTTTATTTCCTTTTTTATCCTACTCGTTTTCTTTTCTTTTCTTTTTTTTTTGTTCTTCGAAACGAAATCATGCCTCGATCAATGCGAGCTTTCACGACCGTGCCGTATGTTTTTAAATATATATATATATATATATATATATATATATATATACCTTTGAAATATTGCGAATTCGTTACTCTCTGGAGTCAATGGAGTATAGTCCATTGTCGTGAACATATCTTGACGCGTAAACTTATTATTATTCCCTGAGACGATCGAGCAAAAAATGTTTANNNAGATCGATTGCCTCTTTGGAACATGGAATGCGAATAAGATAAGGGAAAGATCTTGTTCGATTATCATTTAAAAGTTTCGTTTAAAAAAGGTAGGAATGGAAAAGCGTGTACATCCAAAGAGGCAACAGGAAGAAAATATATCGAATCGAACGGTCGGTTGACGAATGATGACGTATTAAACGTAATCTGCACGCGAGCGTATATGTTTACGCGTGTTCGGCAGGAATAAACTTACAATTAGAGA] [+] EMBL BI512477 [TCCAAATATCCAATATTGTTTATTTCCTTTTTTATCCTACTCGTTTTCTTTTCTTTTCTTTTTTTTTTGTTCTTCGAAACGAAATCATGCCTCGATCAATGCGAGCTTTCACGACCGTGCCGTATGTTTTTAAATATATATATATATATATATATATATATATATATATACCTTTGAAATATTGCGAATTCGTTACTCTCTGGAGTCAATGGAGTATAGTCCATTGTCGTGAACATATCTTGACGCGTAAACTTATTATTATTCCCTGAGACGATCGAGCAAAAAATGTTTANNNAGATCGATTGCCTCTTTGGAACATGGAATGCGAATAAGATAAGGGAAAGATCTTGTTCGATTATCATTTAAAAGTTTCGTTTAAAAAAGGTAGGAATGGAAAAGCGTGTACATCCAAAGAGGCAACAGGAAGAAAATATATCGAATCGAACGGTCGGTTGACGAATGATGACGTATTAAACGTAATCTGCACGCGAGCGTATATGTTTACGCGTGTTCGGCAGGAATAAACTTACAATTAGAGA] consensusID : consensus_2948#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 488 fasta sequence [TGACGAATGATGACGTATTAAACGTAATCTGCACGCGAGCGTATATGTTTACGCGTGTTCGGCAGGAATAAACTTACAATTAGAGATATGTGCGTAACACGAACCTCTGTCTTCCAAACGTGTATTAAAGTTGAACTTTCGTGTGTATTATGTATACGTATATGTATACATATTTAACTACGTGTATACATTTATACAATACACATGTATTGCACATATGCGTATATTTATGAATATGTATACACTCATATGCTATGTACACGAACACATGACACATACGCGTAAACACACACACACACACACACACATATATATACACAATATTTAATATATTTGGAGAACGAGAGAGAGAGAGAGTGGGGAAAAAGAGAGAAAGAGAGAGAAAGAAAGAATGATATTATGGATATCGTATGTCTCACTTCCGTAACAAAATCGACATGATCGCACTTGATTCACGATGTTACGTCGGCAGAAAAAAAAGGAATGTG] [+] EMBL BI507982 [TGACGAATGATGACGTATTAAACGTAATCTGCACGCGAGCGTATATGTTTACGCGTGTTCGGCAGGAATAAACTTACAATTAGAGATATGTGCGTAACACGAACCTCTGTCTTCCAAACGTGTATTAAAGTTGAACTTTCGTGTGTATTATGTATACGTATATGTATACATATTTAACTACGTGTATACATTTATACAATACACATGTATTGCACATATGCGTATATTTATGAATATGTATACACTCATATGCTATGTACACGAACACATGACACATACGCGTAAACACACACACACACACACACACATATATATACACAATATTTAATATATTTGGAGAACGAGAGAGAGAGAGAGTGGGGAAAAAGAGAGAAAGAGAGAGAAAGAAAGAATGATATTATGGATATCGTATGTCTCACTTCCGTAACAAAATCGACATGATCGCACTTGATTCACGATGTTACGTCGGCAGAAAAAAAAGGAATGTG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2948#0 TCCAAATATCCAATATTGTTTATTTCCTTTTTTATCCTACTC-GTTTTCTTTTCTTTTCT 59 consensus_2948#1 -------------TGACGAATGATGACGTATTAAACGTAATCTGCACGCGAGCGTATATG 47 * * * * * * ** * * ** ** * * * * consensus_2948#0 TTTTTTTTTGTTCTTC-GAAACGAAATCATGCCTCGATCAATGCGAGCTTTCACGACCGT 118 consensus_2948#1 TTTACGCGTGTTCGGCAGGAATAAACTTACAATTAGAGATATGTGCG-TAACACGAACCT 106 *** ***** * * ** ** * * * ** *** * * * ***** * * consensus_2948#0 GCCGTATGTTTTTAAATATATATATATATATATATATATATATATATATATACCTTTGAA 178 consensus_2948#1 -CTGT---CTTCCAAACGTGTAT-TAAAGTTGAACTTTCGTGTGTAT-TATGTATACGTA 160 * ** ** *** * *** ** * * * * * * *** *** * * * consensus_2948#0 ATATTGCGAATTCGTTACTCTCTGGAGTCAATGGAGTATAGTCCAT-TGTCGTGAACATA 237 consensus_2948#1 TATGTATACATATTTAACTACGTGTATACATTT--ATACAATACACATGTATTGCACATA 218 * ** * *** ** * ** * ** * * ** *** ** ***** consensus_2948#0 TCTTGACGCGTAAACTTATTATTATTCCCTGAGACGATCGAGCAAAAAATGTTTANNNAG 297 consensus_2948#1 T------GCGTATATTTATGAATATGT----ATACACTC----ATATGCTATGTACACGA 264 * ***** * **** * *** * ** ** * * * * ** consensus_2948#0 ATCGATTGCCTCTTTGGAACATGGAATGCGAATAAGATAAGGGAAAGATCTTGTTCGATT 357 consensus_2948#1 ACACATGACACATACG---CGTA-AACACACACACACACACACACACATAT-ATATACAC 319 * ** * * * * * ** * * * * * * ** * * consensus_2948#0 ATCATTTAAAAGTTTCGTTTAAAAAAGGTAGGAATGGAAAAGCGTGTACATCCAAAGAGG 417 consensus_2948#1 AATATTTAATATATTTGGAGAACGAGAGAGAGAGAGAGTGGGGAAAAAGAGAGAAAGAGA 379 * ****** * ** * ** * * ** * * * * ****** consensus_2948#0 CAACAGGAAGAAAATATATCGAATCGAACGGTCGGTTGACGAATGATGACGTATTAAACG 477 consensus_2948#1 GAGAAAGAAAGAATGATATTATGGATATCGTATGTCTCACTTCCG-TAACAAAATCGACA 438 * * *** ** **** * ** * * ** * * ** * * ** consensus_2948#0 TAATCTGCACGCGAGCGTATATGTTTACGCGTGTTCGGCAGGAATAAACTTACAATTAGA 537 consensus_2948#1 TGATC-GCACTTGATTCACGATGTT-ACG-----TCGGCAGAAAAAAAAGGAATGTG--- 488 * *** **** ** ***** *** ******* ** *** * * consensus_2948#0 GA 539 consensus_2948#1 -- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |