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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_301#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 731 fasta sequence
[TTATATTTTGATAAATGGAGTGCAACGAAGAAGATTGGTCGATAGAATGTTCAGATGATGAGAAATATGAAATGGATGGAAAGAATGAATGGAATTTGAAACCTGATGATATATTAACATTAATTGAAGCTCTTGAAGCTAATAACAGAGTTTCAGAACTTGAATGGAAGTGTCCTGGTAGAAGAGGTCCATCACCTGTTCCTTCAAACAACCGACAACAAGATAATGGCTCACAAGAATACAAGGCAGAAGAAAAATCAGATTTTGATTTTATGGATGAAATGTCGTCACCGAGATTACCAGTTCGTAGAACTGGAGAAAGTACTCCAAAGGGAAGTGCTAAGAAGAAGACTGCTAGCTTTAATGGTGTACTATCTACTATGTTGCGACATCGTAGGTTAGAGCAACAGGAAATCAATTCAAGTCCGAAAAAGATTGAATCATCTGTATCAAAGACACAACCAATTTAAAGCTCTTGTTACATCAATTTCATAAATGTTTGTATATGAAAATTTTATGATTAGTAGGTTGTTTTTTTCTTGAATACATTTAAATTTGATTATTAATATCAATTTCAAACTCTAATTAAAATTGTTTATATTAACATAGTATTTTTCGCGTTATTTAATTAGATATGTAGATAAATATCTTTTGTATCTTTTTTTGCACAGAACATATGTGTATATAAGTATTTTAATACGAGTTATTATTTTTTAATTAGATATGATTAT]
[+] EMBL BI508535 [TTATATTTTGATAAATGGAGTGCAACGAAGAAGATTGGTCGATAGAATGTTCAGATGATGAGAAATATGAAATGGATGGAAAGAATGAATGGAATTTGAAACCTGATGATATATTAACATTAATTGAAGCTCTTGAAGCTAATAACAGAGTTTCAGAACTTGAATGGAAGTGTCCTGGTAGAAGAGGTCCATCACCTGTTCCTTCAAACAACCGACAACAAGATAATGGCTCACAAGAATACAAGGCAGAAGAAAAATCAGATTTTGATTTTATGGATGAAATGTCGTCACCGAGATTACCAGTTCGTAGAACTGGAGAAAGTACTCCAAAGGGAAGTGCTAAGAAGAAGACTGCTAGCTTTAATGGTGTACTATCTACTATGTTGCGACATCGTAGGTTAGAGCAACAGGAAATCAATTCAAGTCCGAAAAAGATTGAATCATCTGTATCAAAGACACAACCAATTTAAAGCTCTTGTTACATCAATTTCATAAATGTTTGTA ]
[+] EMBL BI507437 [ GATGGAAAGAATGAATGGAATTTGAAACCTGATGATATATTAACATTAATTGAAGCTCTTGAAGCTAATAACAGAGTTTCAGAACTTGAATGGAAGTGTCCTGGTAGAAGAGGTCCATCACCTGTTCCTTCAAACAACCGACAACAAGATAATGGCTCACAAGAATACAAGGCAGAAGAAAAATCAGATTTTGATTTTATGGATGAAATGTCGTCACCGAGATTACCAGTTCGTAGAACTGGAGAAAGTACTCCAAAGGGAAGTGCTAAGAAGAAGACTGCTAGCTTTAATGGTGTACTATCTACTATGTTGCGACATCGTAGGTTAGAGCAACAGGAAATCAATTCAAGTCCGAAAAAGATTGAATCATCTGTATCAAAGACACAACCAATTTAAAGCTCTTGTTACATCAATTTCATAAATGTTTGTATATGAAAATTTTATGATTAGTAGGTTGTTTTTTTCTTGAATACATTTAAATTTGATT ]
[+] EMBL BI509555 [ GATGATATATTAACATTAATTGAAGCTCTTGAAGCTAATAACAGAGTTTCAGAACTTGAATGGAAGTGTCCTGGTAGAAGAGGTCCATCACCTGTTCCTTCAAACAACCGACAACAAGATAATGGCTCACAAGAATACAAGGCAGAAGAAAAATCAGATTTTGATTTTATGGATGAAATGTCGTCACCGAGATTACCAGTTCGTAGAACTGGAGAAAGTACTCCAAAGGGAAGTGCTAAGAAGAAGACTGCTAGCTTTAATGGTGTACTATCTACTATGTTGCGACATCGTAGGTTAGAGCAACAGGAAATCAATTCAAGTCCGAAAAAGATTGAATCATCTGTATCAAAGACACAACCAATTTAAAGCTCTTGTTACATCAATTTCATAAATGTTTGTATATGAAAATTTTATGATTAGTAGGTTGTTTTTTTCTTGAATACATTTAAATTTGATTATTAATATCAATTTCAAACTCTAATTAAAATTGTTTATATTAACATAGTATTTTTCGCGTTATTTAATTAGATATGTAGATAAATATCTTTTGTATCTTTTTTTGCACAGAACATATGTGTATATAAGTATTTTAATACGAGTTATTATTTTTTAATTAGATATGATTAT]
consensusID : consensus_301#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 535 fasta sequence
[GATGGAAAGAATGAATGGAATTTGAAACCTGATGATATATTAACATTAATTGAAGCTCTTGAAGCTAATAACAGAGTTTCAGAACTTGAATGGAAGTGTCCTGGTAGAAGAGGTCCATCACCTGTTCCTTCAAACAACCGACAACAAGATAATGGCTCACAAGAATACAAGGCAGAAGAAAAATCAGATTTTGATTTTATGGATGAAATGTCGTCACCGAGATTACCAGTTCGTAGAACTGGAGAAAGTACTCCAAAGGGAAGTGCTAAGAAGAAGACTGCTAGCTTTAATGGTGTACTATCTACTATGTTGCGACATCGTAGGTTAGAGCAACAGGAAATCAATTCAAGTCCGAAAAAGATTGAATCATCTGTATCAAAGACACAACCAATTTAAAGCTCTTGTTACATCAATTTCATAAATCCCACTCTGGAAATTCACCTGTACCCCAAACATAACTACCCCATAAAANNAAAAAAATAGTATTTATTAAAAGAGTATATATGGAAGGAATGCAACCTCCTATCATTAAATA]
[+] EMBL BI517221 [GATGGAAAGAATGAATGGAATTTGAAACCTGATGATATATTAACATTAATTGAAGCTCTTGAAGCTAATAACAGAGTTTCAGAACTTGAATGGAAGTGTCCTGGTAGAAGAGGTCCATCACCTGTTCCTTCAAACAACCGACAACAAGATAATGGCTCACAAGAATACAAGGCAGAAGAAAAATCAGATTTTGATTTTATGGATGAAATGTCGTCACCGAGATTACCAGTTCGTAGAACTGGAGAAAGTACTCCAAAGGGAAGTGCTAAGAAGAAGACTGCTAGCTTTAATGGTGTACTATCTACTATGTTGCGACATCGTAGGTTAGAGCAACAGGAAATCAATTCAAGTCCGAAAAAGATTGAATCATCTGTATCAAAGACACAACCAATTTAAAGCTCTTGTTACATCAATTTCATAAATCCCACTCTGGAAATTCACCTGTACCCCAAACATAACTACCCCATAAAANNAAAAAAATAGTATTTATTAAAAGAGTATATATGGAAGGAATGCAACCTCCTATCATTAAATA]
[+] EMBL BI509390 [ TTGAAACCTGATGATATATTAACATTAATTGAAGCTCTTGAAGCTAATAACAGAGTTTCAGAACTTGAATGGAAGTGTCCTGGTAGAAGAGGTCCATCACCTGTTCCTTCAAACAACCGACAACAAGATAATGGCTCACAAGAATACAAGGCAGAAGAAAAATCAGATTTTGATTTTATGGATGA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_301#0 TTATATTTTGATAAATGGAGTGCAACGAAGAAGATTGGTCGATAGAATGTTCAGATGATG 60
consensus_301#1 ------------------------------------------------------------
consensus_301#0 AGAAATATGAAATGGATGGAAAGAATGAATGGAATTTGAAACCTGATGATATATTAACAT 120
consensus_301#1 --------------GATGGAAAGAATGAATGGAATTTGAAACCTGATGATATATTAACAT 46
**********************************************
consensus_301#0 TAATTGAAGCTCTTGAAGCTAATAACAGAGTTTCAGAACTTGAATGGAAGTGTCCTGGTA 180
consensus_301#1 TAATTGAAGCTCTTGAAGCTAATAACAGAGTTTCAGAACTTGAATGGAAGTGTCCTGGTA 106
************************************************************
consensus_301#0 GAAGAGGTCCATCACCTGTTCCTTCAAACAACCGACAACAAGATAATGGCTCACAAGAAT 240
consensus_301#1 GAAGAGGTCCATCACCTGTTCCTTCAAACAACCGACAACAAGATAATGGCTCACAAGAAT 166
************************************************************
consensus_301#0 ACAAGGCAGAAGAAAAATCAGATTTTGATTTTATGGATGAAATGTCGTCACCGAGATTAC 300
consensus_301#1 ACAAGGCAGAAGAAAAATCAGATTTTGATTTTATGGATGAAATGTCGTCACCGAGATTAC 226
************************************************************
consensus_301#0 CAGTTCGTAGAACTGGAGAAAGTACTCCAAAGGGAAGTGCTAAGAAGAAGACTGCTAGCT 360
consensus_301#1 CAGTTCGTAGAACTGGAGAAAGTACTCCAAAGGGAAGTGCTAAGAAGAAGACTGCTAGCT 286
************************************************************
consensus_301#0 TTAATGGTGTACTATCTACTATGTTGCGACATCGTAGGTTAGAGCAACAGGAAATCAATT 420
consensus_301#1 TTAATGGTGTACTATCTACTATGTTGCGACATCGTAGGTTAGAGCAACAGGAAATCAATT 346
************************************************************
consensus_301#0 CAAGTCCGAAAAAGATTGAATCATCTGTATCAAAGACACAACCAATTTAAAGCTCTTGTT 480
consensus_301#1 CAAGTCCGAAAAAGATTGAATCATCTGTATCAAAGACACAACCAATTTAAAGCTCTTGTT 406
************************************************************
consensus_301#0 ACATCAATTTCATAAATGTTTGTATATGAAAATTTTATGATTAGTAGGTTGTTTTTTTCT 540
consensus_301#1 ACATCAATTTCATAAATCCCACTCT--GGAAATTC---------------ACCTGTACCC 449
***************** * * * ***** * * *
consensus_301#0 TGAATACATTTAAATTTGATTATTAATATCAATTTCAAACTCTAATTAAAATTGTTTATA 600
consensus_301#1 CAAACATAACTACCCCATAAAANNAAAA--AAAT---AGTATTTATTAAAAGAGTATATA 504
** * * ** * * ** * ** * * * ******* ** ****
consensus_301#0 TTAACATAGTATT-TTTCGCGTTATTTAATTAGATATGTAGATAAATATCTTTTGTATCT 659
consensus_301#1 TGGAAGGAATGCAACCTCCTATCATTAAATA----------------------------- 535
* * * * ** * *** ***
consensus_301#0 TTTTTTGCACAGAACATATGTGTATATAAGTATTTTAATACGAGTTATTATTTTTTAATT 719
consensus_301#1 ------------------------------------------------------------
consensus_301#0 AGATATGATTAT 731
consensus_301#1 ------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |