Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Apis mellifera
cluster # 350 cluster # 350       Sequences # 5       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_350#0 length = 886 sequences # 5  
consensusID : consensus_350#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 886
fasta sequence 
                              [AATTGTCACCTCGGATTTGTAAAAGCCAAAAAAAAAAAAAAAAGGAAAAAAAAATATGCTTCGATTTTTCGATATATATGGAAAGAAGCGACTATTTTGAACCTATTTCGATTTTTTTTTTTTTTACACGGATAAGTTATTATCAATATTGAAAATGAAATGAAATTAGAAAAAAATTTGATCGAGTCGAGAGTTTTTCTCGACTCGTATCGATAGGAAAGTGAGTTTTAATATATTTTTCTTGTCGATACGACGAGAATACATTCAATAAATATTTCTTTCTTATATTTAATTT---AAAAAAAAAAACATAAAAAGAATAGAAATAAAAACGTATATTTATGTTTATTATTATTATTCTAGGCAAAATTTAAATAACGAATCAACAATCGGAAAATCAAAGTGAATCCGAGATGTGCGGATCGATAAACGCAACGACAAGCGAATATGCATCACGGCTTGTAAGCCTAAACGTGAGAAAAAAACACTCTTAGTTTTTTTAATCGATCAACGTGAAAATAATTACAATTTTTTATTTAATAATTTTTTCTTGTTATTTAAAGTTTACTTAGAGTATACCCGAAACCGTGACCTCTTGGGCATCACTATGATTGTTACTGATGAAGTATATATTATACTATATATGTATATACATATATAATATATATGTATATATATATACATATAATTAGTTCACAGCATTTGAATTTACTCTAAAATAATTACTTTACACTCTAACCACATTTATTTGCATCCATAAATTGTTATTCTTTCATCATCAGAGTTATTCCATTCAATGTTAAATAATTATAAATATTAAAAAAAAACATAATATATTAACTATTTTCACTCATGAAAAAGCATCGTTACCTGTATGACAAGTGACCAT]

[+] EMBL BI511617             [AATTGTCACCTCGGATTTGTAAAAGCCAAAAAAAAAAAAAAAAGGAAAAAAAAATATGCTTCGATTTTTCGATATATATGGAAAGAAGCGACTATTTTGAACCTATTTCGATTTTTTTTTTTTTTACACGGATAAGTTATTATCAATATTGAAAATGAAATGAAATTAGAAAAAAATTTGATCGAGTCGAGAGTTTTTCTCGACTCGTATCGATAGGAAAGTGAGTTTTAATATATTTTTCTTGTCGATACGACGAGAATACATTCAATAAATATTTCTTTCTTATATTTAATTT   AAAAAAAAAAANNNAAAAAGAATAGAAATAAANNNGTATATTTATGTTTATTATTATTATTCTAGGCAAAATTTAAATAACGAATCAACAATCGGAAAATCAAAGTGAATCCGAAATGTGCGGATCGATAAACGCAACGACAAGCGAATATGCATCACGG                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BI513744             [                                                                            TATGGAAAGAAGCGACTATTTTGAACCTATTTCGATTTTTTTTTTTTTTACACGGATAAGTTATTATCAATATTGAAAATGAAATGAAATTAGAAAAAAATTTGATCGAGTCGAGAGTTTTTCTCGACTCGTATCGATAGGAAAGTGAGTTTTAATATATTTTTCTTGTCGATACGACGAGAATACATTCAATAAATATTTCTTTCTTATATTTAATTTAAAAAAAAAAAAAACATAAAAAGAATAGAAATAAAAACGTATATTTATGTTTATTATTATTATTCTAGGCAAAATTTAAATAACGAATCAACAATCGGAAAATCAAAGTGAATCCGNNNTGTGCGGATCGATAAACGCAACGACAAGCGAATATGCATCACGGCTTGTAAGCCTAAACGTGAGAAAAAAACACTCTTAGTT                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BI511282             [                                                                                                                                                     TGAAAATGAAATGAAATTAGAAAAAAATTTGATCGAGTCGAGAGTTTTTCTCGACTCGTATCGATAGGAAAGTGAGTTTTAATATATTTTTCTTGTCGATACGACGAGAATACATTCAATAAATATTTCTTTCTTATATTTAATTT   AAAAAAAAAAACATAAAAAGAATAGAAATAAAAACGTATATTTATGTTTATTATTATTATTCTAGGCAAAATTTAAATAACGAATCAACAATCGGAAAATCAAAGTGAATCCGAGATGTGCGGATCGATAAACGCAACGACAAGCGAATATGCATCACGGCTTGTAAGCCTAAACGTGAGAAAAAAACACTCTTAGTTTTTTTAATCGATCAACGTGAAAATAATTACAATTTTTTATT                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL BI513275             [                                                                                                                                                                                                                                                                                                                                                             TATTATTATTCNAGGCAAAATTTAAATAACGAATCAACAATCGGAAAATCAAAGTGAATCCGAGATGTGCGGATCGATAAACGCAACGACAAGCGAATATGCATCACGGCTTGTAAGCCTAAACGTGAGAAAAAAACACTCTTAGTTTTTTTAATCGATCAACGTGAAAATAATTACAATTTTTTATTTAATAATTTTTTCTTGTTATTTAAAGTTTACTTAGAGTATACCCGAAACCGTGACCTCTTGGGCATCACTATGATTGTTACTGATGAAGTATATATTATACTATATATGTATATACATATATAATATATATGTATATATATATACATATAATTAGTTCACAGCATTTGAATTTACTCTAAAATAATTACTTTACACTCTAACCACATTTATTTGCATCCATAAATTGTTATTCTTTCATCATCAGAGTTATTCCATTCAATGTTAAATAATTATAAATATTAAAAAAAAACATAATATATTAACTATTTTCACTCATGAAAAAGCATCGTTACCTGTATGACAAGTGACCAT]
[-] EMBL BI510720             [                                                                                                                                                                                                                                                                                                                                                                                                                                         ATAAACGCAACGACAAGCGAATATGCATCACGGCTTGTAAGCCTAAACGTGAGAAAAAAACACTCTTAGTTTTTTTAATCGATCAACGTGAAAATAATTACAATTTTTTATTTAATAATTTTTTCTTGTTATTTAAAGTTTACTTAGAGTATACCCGAAACCGTGACCTCTTGGGCATCACTATGATTGTTACTGATGAAGTATATATTATACTATATATGTATATACATATATAATATATATGTATATATATATACATATAATTAGTTCACAGCATTTGAATTTACTCTAAAATAATTACTTTACACTCTAACCACATTTATTTGCATCCATAAATTGTTATTCTTTCATCATCAGAGTTATTCCATTCAATGTTAAATAATTATAAATATTAAAAAAAAACATAATATATTAACTATTTTCACTCATGAAAAAGCATCGTTACCTGTATGACAAGTGAC   ]




>consensus_350#0
AATTGTCACCTCGGATTTGTAAAAGCCAAAAAAAAAAAAAAAAGGAAAAAAAAATATGCT
TCGATTTTTCGATATATATGGAAAGAAGCGACTATTTTGAACCTATTTCGATTTTTTTTT
TTTTTACACGGATAAGTTATTATCAATATTGAAAATGAAATGAAATTAGAAAAAAATTTG
ATCGAGTCGAGAGTTTTTCTCGACTCGTATCGATAGGAAAGTGAGTTTTAATATATTTTT
CTTGTCGATACGACGAGAATACATTCAATAAATATTTCTTTCTTATATTTAATTTAAAAA
AAAAAACATAAAAAGAATAGAAATAAAAACGTATATTTATGTTTATTATTATTATTCTAG
GCAAAATTTAAATAACGAATCAACAATCGGAAAATCAAAGTGAATCCGAGATGTGCGGAT
CGATAAACGCAACGACAAGCGAATATGCATCACGGCTTGTAAGCCTAAACGTGAGAAAAA
AACACTCTTAGTTTTTTTAATCGATCAACGTGAAAATAATTACAATTTTTTATTTAATAA
TTTTTTCTTGTTATTTAAAGTTTACTTAGAGTATACCCGAAACCGTGACCTCTTGGGCAT
CACTATGATTGTTACTGATGAAGTATATATTATACTATATATGTATATACATATATAATA
TATATGTATATATATATACATATAATTAGTTCACAGCATTTGAATTTACTCTAAAATAAT
TACTTTACACTCTAACCACATTTATTTGCATCCATAAATTGTTATTCTTTCATCATCAGA
GTTATTCCATTCAATGTTAAATAATTATAAATATTAAAAAAAAACATAATATATTAACTA
TTTTCACTCATGAAAAAGCATCGTTACCTGTATGACAAGTGACCAT

clustalw multiple alignements is not computed in this case
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)