These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_352#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 566 fasta sequence [GCCCAATCCACCATCCGACCGGCCGCTTCAGGTACATTCCACTGTCGCCACTATCCAGGTACAGCCCGCTGGCAGGCGATCTATTGGCAAACTCGATGCTACCCGGGAACGCGATGAATGGTTCCGGCTGGTGTATCTTCGTGTATAATCTCGCCCCAGAGACCGAGGAGAACGTGCTGTGGCAGTTGTTCGGTCCGTTCGGCGCCGTCCAATCGGTCAAAGTGATCCGCGACCTGCAGACGAACAAGTGCAAAGGCTTCGGTTTCGTGACGATGACCAACTATGACGAGGCGGTGGTCGCCATCCAGAGCTTGAACGGTTACACGCTCGGTAACCGGGTTCTCCAAGTGAGCTTCAAGACGAACAAGAGCAAGGCGGCGTAGGACGACAAGCAACAGCAGCAACAGCATCACCACGATCACCACCACCACTACGACCACCACCACCATCATCGGGCAGCGGGAACAACGGCAGCAGCGGCGGCGGCGGCAGTAGCGGCGGCAGCCACGCCGGCTGTGGCGGCAGCCGCGGCCACGATCGGTCAGGCGACCGCTACAAAGGCCATC] [+] EMBL BI515528 [GCCCAATCCACCATCCGACCGGCCGCTTCAGGTACATTCCACTGTCGCCACTATCCAGGTACAGCCCGCTGGCAGGCGATCTATTGGCAAACTCGATGCTACCCGGGAACGCGATGAATGGTTCCGGCTGGTGTATCTTCGTGTATAATCTCGCCCCAGAGACCGAGGAGAACGTGCTGTGGCAGTTGTTCGGTCCGTTCGGCGCCGTCCAATCGGTCAAAGTGATCCGCGACCTGCAGACGAACAAGTGCAAAGGCTTCGGTTTCGTGACGATGACCAACTATGACGAGGCGGTGGTCGCCATCCAGAGCTTGAACGGTTACACGCTCGGTAACCGGGTTCTCCAAGTGAGCTTCAAGACGAACAAGAGCAAGGCGGCGTAGGACGACAAGCAACAGCAGCAACAGCATCACCACGATCACCACCACCACTACGACCACCACCACCATCATCGGGCAGCGGGAACAACGGCAGCAGCGGCGGCGGCGGC ] [+] EMBL BI510520 [ ACATTCCACTGTCGCCACTATCCAGGTACAGCCCGCTGGCAGGCGATCTATTGGCAAACTCGATGCTACCCGGGAACGCGATGAATGGTTCCGGCTGGTGTATCTTCGTGTATAATCTCGCCCCAGAGACCGAGGAGAACGTGCTGTGGCAGTTGTTCGGTCCGTTCGGCGCCGTCCAATCGGTCAAAGTGATCCGCGACCTGCAGACGAACAAGTGCAAAGGCTTCGGTTTCGTGACGATGACCAACTATGACGAGGCGGTGGTCGCCATCCAGAGCTTGAACGGTTACACGCTCGGTAACCGGGTTCTCCAAGTGAGCTTCAAGACGAACAAGAGCAAGGCGGCGTAGGACGACAAGCAACAGCAGCAACAGCATCACCACGATCACCACCACCACTACGACCACCACCACCATCATCGGGCAGCGGGAACAACGGCAGCAGCGGCGGCGGCGGCAGTAGCGGCGGCAGCCACGCCGGCTGTGGCGGCAGCCGCGGCCACGATCGGTCAGGCGACCGCTACAAAGGCCATC] [+] EMBL BI514855 [ ACATTCCACTGTCGCCACTATCCAGGTACAGCCCGCTGGCAGGCGATCTATTGGCAAACTCGATGCTACCCGGGAACGCGATGAATGGTTCCGGCTGGTGTATCTTCGTGTATAATCTCGCCCCAGAGACCGAGGAGAACGTGCTGTGGCAGTTGTTCGGTCCGTTCGGCGCCGTCCAATCGGTCAAAGTGATCCGCGACCTGCAGACGAACAAGTGCAAAGGCTTCGGTTTCGTGACGATGACCAACTATGACGAGGCGGTGGTCGCCATCCAGAGCTTGAACGGTTACACGCTCGGTAACCGGGTTCTCCAAGTGAGCTTCAAGACGAACAAGAGCAAGGCGGCGTAGGACGACAAGCAACAGCAGCAACAGCATCACCACGA ] consensusID : consensus_352#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 430 fasta sequence [TCAAAGGCGCAAACTTGTACGTGAGCGGTTTGCCGAAGAACATGACGCAACAAGATCTGGAGAATCTATTCAGCCCGTACGGCAGAATCATCACGTCGCGGATACTTTGCGACAACATCACCGGATTGTCGAAAGGGGTCGGTTTCATAAGGTTCGACCAGCGGGTCGAGGCCGAGAGGGCGATCCAAGAATTAAACGGTACCATTCCGAAGGGCTCGTCCGAGCCGATCACCGTCAAGTTCGCCAACAATCCGAGCAACAACAACAAGGCGATACCGCCGTTGGCCTATCTGACACCGCAGGCGACCCGACGATATGGCGNNCCAATCCACCATCCGACCGGCCGCTTCAGGTACATTCCACTGTCGCCACTATCCAG-AGGTACAGCCCGCTGGCAGGCGATCTATTGGCAAACTCGATGCTACCCGGG] [+] EMBL BI511619 [TCAAAGGCGCAAACTTGTACGTGAGCGGTTTGCCGAAGAACATGACGCAACAAGATCTGGAGAATCTATTCAGCCCGTACGGCAGAATCATCACGTCGCGGATACTTTGCGACAACATCACCGGATTGTCGAAAGGGGTCGGTTTCATAAGGTTCGACCAGCGGGTCGAGGCCGAGAGGGCGATCCAAGAATTAAACGGTACCATTCCGAAGGGCTCGTCCGAGCCGATCACCGTCAAGTTCGCCAACAATCCGAGCAACAACAACAAGGCGATACCGCCGTTGGCCTATCTGACACCGCAGGCGACCCGACGATATGGCGGCCCAATCCACCATCCGACCGGCCGCTTCAGGTACATTCCACTGTCGCCACTATCCAGTAGGTACAGCCCGCTGGCAGGCGATCTATTGGCAAACTCGATGCTACCCGGG] [+] EMBL BI513704 [TCAAAGGCGCAAACTTGTACGTGAGCGGTTTGCCGAAGAACATGACGCAACAAGATCTGGAGAATCTATTCAGCCCGTACGGCAGAATCATCACGTCGCGGATACTTTGCGACAACATCACCGGATTGTCGAAAGGGGTCGGTTTCATAAGGTTCGACCAGCGGGTCGAGGCCGAGAGGGCGATCCAAGAATTAAACGGTACCATTCCGAAGGGCTCGTCCGAGCCGATCACCGTCAAGTTCGCCAACAATCCGAGCAACAACAACAAGGCGATACCGCCGTTGGCCTATCTGACACCGCAGGCGACCCGACGATATGGCGNNCCAATCCACCATCCGACCGGCCGCTTCAGGTACATTCCACTGTCGCCACTATCC AGGTACAGCCCGCTGGCAGGCGATCTATTGGCAAACTCGATGCTACC ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_352#0 GCCCAATCCACCATCCGACCGGCCGCTTCAGGTACATTCCACTGTCGCCACTATCCAGGT 60 consensus_352#1 ------------------------------------------------------------ consensus_352#0 ACAGCCCGCTGGCAGGCGATCTATTGGCAAACTCGATGCTACCCGGGAACGCGATGAATG 120 consensus_352#1 ------------------------------------------------------TCAAAG 6 * ** * consensus_352#0 GTTCCGGCTGGTGTATCTTCGTGTATAATCTCGCCCCAGAGACCGAGGAGA-ACGTGCTG 179 consensus_352#1 GCGCAAACTTGTA------CGTGAGCGGTTT-GCCGAAGAACATGACGCAACAAGATCTG 59 * * ** ** **** * * *** *** ** * * * * *** consensus_352#0 TGGCAGTTGTTCGGTCCGTTCGGCGCCGTCCAATCGGTCAAAGTGATCCGCGACCTGCAG 239 consensus_352#1 GAGAATCTATTCAGCCCGTACGGCAGAATCATCACGTCGCGGATACTTTGCGACAACATC 119 * * * *** * **** **** ** ** * * ***** consensus_352#0 ACGAACAAGTGCAAAGGCTTCGGTTTCGTGACGATGACCAACTATGACGAGGCGGTGGTC 299 consensus_352#1 ACCGGATTGTCGAAAGGGGTCGGTTTCATAAGGTTCGACCAGCGGGTCGAGGCCGAGAGG 179 ** ** ***** ******** * * * * * * * ****** * * consensus_352#0 GCCATCCAGAGCTTGAACGGTTACACGCTCGGTAACCGGGTTCTCCAAGTGAGCTTCAAG 359 consensus_352#1 GCGATCCAAGAATTAAACGGTACCATTCCGAA-----GGGCTCG----------TCCGAG 224 ** ***** ** ****** ** * *** ** * * ** consensus_352#0 ACGAACAAGAGCAAGGCGGCGTAGGACGACAAGCAACAGCAGCAACAGCATCACCACGAT 419 consensus_352#1 CCGATCACCGTCAAGTTCGC-CAACAATCCGAGCAACAACAACAA-GGCGATACCGCCGT 282 *** ** **** ** * * * ******* ** *** ** *** * * consensus_352#0 CACCACCACCACTACGACCACCACCACCATCATCGGGCAGCGGGAACAACGGCAGCAGCG 479 consensus_352#1 TGGCCTATCTGACACCGCAGGCGACCCGACGATATGGCGNNCCAATCCACCATCCGACCG 342 * * ** * * * * * ** *** * * ** * ** consensus_352#0 GCGGCGGCGGCAGTAG-CGGCGGCAGCCACG--CCGGCTGTGGCGGCAGCCG-CGGCCA- 534 consensus_352#1 GCCGCTTCAGGTACATTCCACTGTCGCCACTATCCAGAGGTACAGCCCGCTGGCAGGCGA 402 ** ** * * * * * * ***** ** * ** * * ** * * * * consensus_352#0 -CGATCGGTCAGGCGACCGCTACAAAGGCCATC 566 consensus_352#1 TCTATTGGCAAACTCGATGCTACCCGGG----- 430 * ** ** * ***** ** |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |