These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_356#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 659 fasta sequence [GGAGGCAGGCGTACTTATCGTTTCGATTTATCGAAGCATTTAACGACATTATTCGTAAGAAAACAAATCCAATTTGTAGAATGTAACATTCATCGATAATATTCTTTTGTTAAGTAGAAAACGAATGATACAAATACAGAAAGTGTTCAACAGGTGTACCTTTTATTTTCCTCCACGATACAGTTCCATGCGAAGACAAAGAACGATTCCGGATAGTGGATTTGGTTGAACTATCATCGAACGGGATTTATCTATCTGGAATATCGACAACGTGAATTTAGTGATTGCTCTCAAGATTCCTTATTGTGTCTGTGTCGTGTCAATTTTCAAGTGATTGCTCAATTAGTCAGCAATCAGATTCGTTCGTTAAGAGGACTCTCAAGTAGATATCAATTAAAGAATTAATAACAGCGGGTTAATGCAGCATACAGAAGAAGATGGACACAACCAATTTGAAATCGAAACCAAATCCACGAGAAAAAGCAAATTTACTATCAGTGTTACTTTGGTGGTGGACAATAGATTTATTCAAGATAGGCTACAGAAAGATTCTGCAAACCGATGATTTATATACTCCTTTGAAGACGGATCGATCGAATGTGCTTGGAGATCGATTGGAAAAGCGATGGAAAATTGAGATGGAAAATTCGAAAAAAAAA] [+] EMBL BI507860 [GGAGGCAGGCGTACTTATCGTTTCGATTTATCGAAGCATTTAACGACATTATTCGTAAGAAAACAAATCCAATTTGTAGAATGTAACATTCATCGATAATATTCTTTTGTTAAGTAGAAAACGAATGATACAAATACAGAAAGTGTTCAACAGGTGTACCTTTTATTTTCCTCCACGATACAGTTCCATGCGAAGACAAAGAACGATTCCGGATAGTGGATTTGGTTGAACTATCATCGAACGGGATTTATCTATCTGGAATATCG ACGTGAATTTAGTGATTGCTCTCAAGATTCCTTATTGTGTCTGTGTCGTGTCAATTTTCAAGTGATTGCTCAATTAGTCAGCAATCAGATTCGTTCGTTAAGAGGACTCTCAAGTAGATATCAATTAAAGAATTAATAACAGTGGGTTAATGCAGCATACAGAAGAAGATGGACACAACCAATTTGAAATCGAAACCAAATCCACGAGAAAAAGCAAATTTACTATCAGTGTTACTTTGGTGGTGGACAATAGATTTATTCAAGATAG ] [+] EMBL BI505028 [GGAGGCAGGCGTACTTATCGTTTCGATTTATCGAAGCATTTAACGACATTATTCGTAAGAAAACAAATCCAATTTGTAGAATGTAACATTCATCGATAATATTCTTTTGTTAAGTAGAAAACGAATGATACAAATACAGAAAGTGTTCAACAGGTGTACCTTTTATTTTCCTCCACGATACAGTTCCATGCGAAGACAAAGAACGATTCCGGATAGTGGATTTGGTTGAACTATCATCGAACGGGATTTATCTATCTGGAATATCG ACGTGAATTTAGTGATTGCTCTCAAGATTCCTTATTGTGTCTGTGTCGTGTCAATTTTCAAGTGATTGCTCAATTAGTCAGCAATCAGATTCGTTCGTTAAGAGGACTCTCAAGTAGATATCAATTAAAGAATTAATAACAGTGGGTTAATGCAGCATACAGAAGAAGATGGACACAACCAATTTGAAATCGAAACCAAATCCACGAGAAAAAGCAAATTTACTATCAGTGTTACTTTGGTGGTGGACAA ] [+] EMBL BI506389 [ CAGAAAGTGTTCAACAGGTGTACCTTTTATTTTCCTCCACGATACAGTTCCATGCGAAGACAAAGAACGATTCCGGATAGTGGATTTGGTTGAACTATCATCGAACGGGATTTATCTATCTGGAATATCGACAACGTGAATTTAGTGATTGCTCTCAAGATTCCTTATTGTGTCTGTGTCGTGTCAATTTTCAAGTGATTGCTCAATTAGTCAGCAATCAGATTCGTTCGTTAAGAGGACTCTCAAGTAGATATCAATTAAAGAATTAATAACAGCGGGTTAATGCAGCATACAGAAGAAGATGGACACAACCAATTTGAAATCGAAACCAAATCCACGAGAAAAAGCAAATTTACTATCAGTGTTACTTTGGTGGTGGACAATAGATTTATTCAAGATAGGCTACAGAAAGATTCTGCAAACCGATGATTTATATACTCCTTTGAAGACGGATCGATCGAATGTGCTTGGAGATCGATTGGAAAAGCGATGGAAAATTGAGATGGAAAATTCGAAAAAAAAA] [+] EMBL BI509268 [ CAGAAAGTGTTCAACAGGTGTACCTTTTATTTTCCTCCACGATACAGTTCCATGCGAAGACAAAGAACGATTCCGGATAGTGGATTTGGTTGAACTATCATCGAACGGGATTTATCTATCTGGAATATCGACAACGTGAATTTAGTGATTGCTCTCAAGATTCCTTATTGTGTCTGTGTCGTGTCAATTTTCAAGTGATTGCTCAATTAGTCAGCAATCAGATTCGTTCGTTAAGAGGACTCTCAAGTAGATATCAATTAAAGAATTAATAACAGCGGGTTAATGCAGCATACAGAAGAAGATGGACACAACCAATTTGAAATCGAAACCAAATCCACGAGAAAAAGCAAATTTACTATCAGTGTTACTTTGGTGGTGGACAATAGATTTATTCAAGATAGGCTACAGAAAGATTCTGCAAACCGATGATTTATATACTCCTTTGAAGACGGATCGATCGAATGTGCTTGGAGATCGATTGGAAAAGCGATGGAAAATTGAGATGGAAAATTCGAAAAAAAAA] consensusID : consensus_356#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 571 fasta sequence [ACAGGTGTACCTTTTATTTTCCTCCACGATACAGTTCCATGCGAAGACAAAGAACGATTCCGGATAGTGGATTTGGTTGAACTATCATCGAACGGGATTTATCTATCTGGAATATCGACAACGTGAATTTAGTGATTGCTCTCAAGATTCCTTATTGTGTCTGTGTCGTGTCAATTTTCAAGTGATTGCTCAATTAGTCAGCAATCAGATTCGTTCGTTAAGAGGACTCTCAAGTAGATATGTAAGCCCCTTGAATGATAAAATCGTCTTTGTTTAAGAAATCAATATCAAGTGTTCACGATTTTCTTATTTTTTTCACTCCCTTAAAACGAATTATACTTGAATACTTTTTTCACTAGCAATTAAAGAATTAATAACAGTGGGTTAATGCAGCATACAGAAGAAGATGGACACAACCAATTTGAAATCGAAACCAAATCCACGAGAAAAAGCAAATTTACTATCAGTGTTACTTTGGTGNTGGACAATAGATTTATTCAAGATAGGCTACAGAAAGATTCTGCAAACCGATGATTTATATACTCCTTTGAAGACGGATCGATCGAATGTG] [+] EMBL BI503056 [ACAGGTGTACCTTTTATTTTCCTCCACGATACAGTTCCATGCGAAGACAAAGAACGATTCCGGATAGTGGATTTGGTTGAACTATCATCGAACGGGATTTATCTATCTGGAATATCGACAACGTGAATTTAGTGATTGCTCTCAAGATTCCTTATTGTGTCTGTGTCGTGTCAATTTTCAAGTGATTGCTCAATTAGTCAGCAATCAGATTCGTTCGTTAAGAGGACTCTCAAGTAGATATGTAAGCCCCTTGAATGATAAAATCGTCTTTGTTTAAGAAATCAATATCAAGTGTTCACGATTTTCTTATTTTTTTCACTCCCTTAAAACGAATTATACTTGAATACTTTTTTCACTAGCAATTAAAGAATTAATAACAGTGGGTTAATGCAGCATACAGAAGAAGATGGACACAACCAATTTGAAATCGAAACCAAATCCACGAGAAAAAGCAAATTTACTATCAGTGTTACTTTGGTGNTGGACAATAGATTTATTCAAGATAGGCTACAGAAAGATTCTGCAAACCGATGATTTATATACTCCTTTGAAGACGGATCGATCGAATGTG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_356#0 GGAGGCAGGCGTACTTATCGTTTCGATTTATCGAAGCATTTAACGACATTATTCGTAAGA 60 consensus_356#1 ------------------------------------------------------------ consensus_356#0 AAACAAATCCAATTTGTAGAATGTAACATTCATCGATAATATTCTTTTGTTAAGTAGAAA 120 consensus_356#1 ------------------------------------------------------------ consensus_356#0 ACGAATGATACAAATACAGAAAGTGTTCAACAGGTGTACCTTTTATTTTCCTCCACGATA 180 consensus_356#1 -----------------------------ACAGGTGTACCTTTTATTTTCCTCCACGATA 31 ******************************* consensus_356#0 CAGTTCCATGCGAAGACAAAGAACGATTCCGGATAGTGGATTTGGTTGAACTATCATCGA 240 consensus_356#1 CAGTTCCATGCGAAGACAAAGAACGATTCCGGATAGTGGATTTGGTTGAACTATCATCGA 91 ************************************************************ consensus_356#0 ACGGGATTTATCTATCTGGAATATCGACAACGTGAATTTAGTGATTGCTCTCAAGATTCC 300 consensus_356#1 ACGGGATTTATCTATCTGGAATATCGACAACGTGAATTTAGTGATTGCTCTCAAGATTCC 151 ************************************************************ consensus_356#0 TTATTGTGTCTGTGTCGTGTCAATTTTCAAGTGATTGCTCAATTAGTCAGCAATCAGATT 360 consensus_356#1 TTATTGTGTCTGTGTCGTGTCAATTTTCAAGTGATTGCTCAATTAGTCAGCAATCAGATT 211 ************************************************************ consensus_356#0 CGTTCGTTAAGAGGACTCTCAAGTAGATAT------------------------------ 390 consensus_356#1 CGTTCGTTAAGAGGACTCTCAAGTAGATATGTAAGCCCCTTGAATGATAAAATCGTCTTT 271 ****************************** consensus_356#0 ------------------------------------------------------------ consensus_356#1 GTTTAAGAAATCAATATCAAGTGTTCACGATTTTCTTATTTTTTTCACTCCCTTAAAACG 331 consensus_356#0 ----------------------------CAATTAAAGAATTAATAACAGCGGGTTAATGC 422 consensus_356#1 AATTATACTTGAATACTTTTTTCACTAGCAATTAAAGAATTAATAACAGTGGGTTAATGC 391 ********************* ********** consensus_356#0 AGCATACAGAAGAAGATGGACACAACCAATTTGAAATCGAAACCAAATCCACGAGAAAAA 482 consensus_356#1 AGCATACAGAAGAAGATGGACACAACCAATTTGAAATCGAAACCAAATCCACGAGAAAAA 451 ************************************************************ consensus_356#0 GCAAATTTACTATCAGTGTTACTTTGGTGGTGGACAATAGATTTATTCAAGATAGGCTAC 542 consensus_356#1 GCAAATTTACTATCAGTGTTACTTTGGTGNTGGACAATAGATTTATTCAAGATAGGCTAC 511 ***************************** ****************************** consensus_356#0 AGAAAGATTCTGCAAACCGATGATTTATATACTCCTTTGAAGACGGATCGATCGAATGTG 602 consensus_356#1 AGAAAGATTCTGCAAACCGATGATTTATATACTCCTTTGAAGACGGATCGATCGAATGTG 571 ************************************************************ consensus_356#0 CTTGGAGATCGATTGGAAAAGCGATGGAAAATTGAGATGGAAAATTCGAAAAAAAAA 659 consensus_356#1 --------------------------------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |