Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Apis mellifera
cluster # 407 cluster # 407       Sequences # 4       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_407#0 length = 928 sequences # 4  
consensusID : consensus_407#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 928
fasta sequence 
                              [AATATGTACAATAGATAAATTAGAGAGGAGAGAGAGAGAGAGAGAGAAAGGGAGAGAGAGGGAGAAGATAAGGTGATATATAAAATCTATCTACCACGGAGGGAGGGACGCCACGAGTGAATATATCATCCTTTGTCTTCCATGCATAATCATCCTAACGAATATCATAGTTTTCAACGAACCATGGACTGACAGTTTCGAAGCGCTGATTCTAGAATTTTCTAGAAATTTTCTGATTCTAGAAGCGGCAAAGCAAAGTCGTTGTGTCTCAAGAAAAGTTTGTGGGTATTTTTGGTTTGATCGAAGGATTTAAGAAAAAAAAAGAAAAATGAAATTTCGTATATAAATATTTTACGATCGATTATCAGGATAATGCCGTTTCCGGAATTGAATAAAAATGATGGTTTTAGACAATTTCTTGGCGTCCCTGTGCTCCTCGATATATATTTTTGGACACCACTTCCTTCATCCATATTCTACCCCTTTTTTCGAATATATCTAACAATATATATTCTCGAAGCAAAATTCCAAGATTTAATGGAGAAATAAGAGAAGAATTTATACTTTACATTTAAATTTAAATCTTATTTTTCAAATTTTGTATATTCTTTTTTTTTATTATTATTATTATTCTGTAATACTTGATATTATTCATTTATCTATTTTTATTAGCATAGCAAATTTTAATTTTACGAAAATCCACGTTTCGAATAATCTAAATTATATCGAGAAATTGGTACAAAATTTCTATTCCGATGAAATTTTTTTTTTTCTAAATCTATTAATCAAAATTGAACGCTCTATAACTCTCTAATAACATATCTATCTTTAAAAATCGTGACGCTTCTACTATATTCGTATATAATTTTCTACAAATGTATAATCGTAACGATAATTCGAAACAATTCAAAAATAAAATAAAAAAAGT]

[+] EMBL BI512480             [AATATGTACAATAGATAAATTAGAGAGGAGAGAGAGAGAGAGAGAGAAAGGGAGAGAGAGGGAGAAGATAAGGTGATATATAAAATCTATCTACCACGGAGGGAGGGACGCCACGAGTGAATATATCATCCTTTGTCTTCCATGCATAATCATCCTAACGAATATCATAGTTTTCAACGAACCATGGACTGACAGTTTCGAAGCGCTGATTCTAGAATTTTCTAGAAATTTTCTGATTCTAGAAGCGGCAAAGCAAAGTCGTTGTGTCTCAAGAAAAGTTTGTGGGTATTTTTGGTTTGATCGAAGGATTTAAGAAAAAAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BI509833             [                                                                                                                                                                                    ACCATGGACTGACAGTTTCGAAGCGCTGATTCTAGAATTTTCTAGAAATTTTCTGATTCTAGAAGCGGCAAAGCAAAGTCGTTGTGTCTCAAGAAAAGTTTGTGGGTATTTTTGGTTTGATCGAAGGATTTAAGAAAAAAAAAGAAAAATGAAATTTCGTATATAAATATTTTACGATCGATTATCAGGATAATGCCGTTTCCGGAATTGAATAAAAATGATGGTTTTAGACAATTTCTTGGCGTCCCTGTGCTCCTCGATATATATTTTTGGACACCACTTCCTTCATCCATATTCTACCCCTTTTTTCGAATATATCTAACAATATATATTCTCGAAGCAAAATTCCAAGATTTAATGGAGAAATAAGAGAAGAATTTATACTTTACATTTAAATTTAAATCTTATTTTTCAAATTTTGTATATTCTTTTTTTTTATTATTATTATTATTCTGTAATACTTGATATTATTCATTTATCTATTTTTATTAGCATAGCAAATTTTAATTTTACGAAAATCCACGTTTCGAATAATCTAAATTATATCGAGAAATTGGTACAAAATTTCTATTCCGATGAAATTTTTTTTTTTCTAAATCTATTAATCAAAATTGAACGCTCTATAACTCTCTAATAACATATCTATCTTTAAAAATCGTGACGCTTCTA                                                                               ]
[+] EMBL BI507635             [                                                                                                                                                                                    ACCATGGACTGACAGTTTCGAAGCGCTGATTCTAGAATTTTCTAGAAATTTTCTGATTCTAGAAGCGGCAAAGCAAAGTCGTTGTGTCTCAAGAAAAGTTTGTGGGTATTTTTGGTTTGATCGAAGGATTTAAGAAAAAAAAAGAAAAATGAAATTTCGTATATAAATATTTTACGATCGATTATCAGGATAATGCCGTTTCCGGAATTGAATAAAAATGATGGTTTTAGACAATTTCTTGGCGTCCCTGTGCTCCTCGATATATATTTTTGGACACCACTTCCTTCATCCATATTCTACCCCTTTTTTCGAATATATCTAACAATATATATTCTCGAAGCAAAATTCCAAGATTTAATGGAGAAATAAGAGAAGAATTTATACTTTACATTTAAATTTAAATCTTATTTTTCAAATTTTGTATATTCTTTTTTTTTATTATTATTATTATTCTGTAATACTTGATATTATTCATTTATCTATTTTTATTAGNATAGCAAATTTTAATTTTACGAAAATCCACGTTTCGAATAATCTAAATTATATCGAGAAATTGGTACAAAATTTCTATTCCGATG                                                                                                                                                                          ]
[-] EMBL BI512317             [                                                                                                                                                                                                                                                                                                                                                                                                                                                      GATATATATTTTTGGACACCACTNCCTTCATCCATATTCTACCCCTTTTTTCGAATATATCTAACAATATATATTCTCGANGCAAAATTCCAAGATTTAATGGAGAAATAAGAGAAGAATTTATACTTTACATTTAAATTTAAATCTTATTTTTCAAATTTTGTATATTCTTTTTTTTTATTATTATTATTATTCTGTAATACTTGATATTATTCATTTATCTATTTTTATTAGCATAGCAAATTTTAATTTTACGAAAATCCACGTTTCGAATAATCTAAATTATATCGAGAAATTGGTACAAAATTTCTATTCCGATGAAATTTTTTTTTTTCTAAATCTATTAATCAAAATTGAACGCTCTATAACTCTCTAATAACATATCTATCTTTAAAAATCGTGACGCTTCTACTATATTCGTATATAATTTTCTACAAATGTATAATCGTAACGATAATTCGAAACAATTCAAAAATAAAATAAAAAAAGT]




>consensus_407#0
AATATGTACAATAGATAAATTAGAGAGGAGAGAGAGAGAGAGAGAGAAAGGGAGAGAGAG
GGAGAAGATAAGGTGATATATAAAATCTATCTACCACGGAGGGAGGGACGCCACGAGTGA
ATATATCATCCTTTGTCTTCCATGCATAATCATCCTAACGAATATCATAGTTTTCAACGA
ACCATGGACTGACAGTTTCGAAGCGCTGATTCTAGAATTTTCTAGAAATTTTCTGATTCT
AGAAGCGGCAAAGCAAAGTCGTTGTGTCTCAAGAAAAGTTTGTGGGTATTTTTGGTTTGA
TCGAAGGATTTAAGAAAAAAAAAGAAAAATGAAATTTCGTATATAAATATTTTACGATCG
ATTATCAGGATAATGCCGTTTCCGGAATTGAATAAAAATGATGGTTTTAGACAATTTCTT
GGCGTCCCTGTGCTCCTCGATATATATTTTTGGACACCACTTCCTTCATCCATATTCTAC
CCCTTTTTTCGAATATATCTAACAATATATATTCTCGAAGCAAAATTCCAAGATTTAATG
GAGAAATAAGAGAAGAATTTATACTTTACATTTAAATTTAAATCTTATTTTTCAAATTTT
GTATATTCTTTTTTTTTATTATTATTATTATTCTGTAATACTTGATATTATTCATTTATC
TATTTTTATTAGCATAGCAAATTTTAATTTTACGAAAATCCACGTTTCGAATAATCTAAA
TTATATCGAGAAATTGGTACAAAATTTCTATTCCGATGAAATTTTTTTTTTTCTAAATCT
ATTAATCAAAATTGAACGCTCTATAACTCTCTAATAACATATCTATCTTTAAAAATCGTG
ACGCTTCTACTATATTCGTATATAATTTTCTACAAATGTATAATCGTAACGATAATTCGA
AACAATTCAAAAATAAAATAAAAAAAGT

clustalw multiple alignements is not computed in this case
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)