These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_469#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 630 fasta sequence [GGTGCAGTGCATTTTTTTTTTTATTAATAATCCAACGTGCTGCCGAGTAATATATTCATAGCAATTTACATTGAAATGTCACGAAAGTTGCATTAATAACGTTCGAGAACCGAGTTTCTTCGCAACAATTGGATAAAGCTTTGAGCAATTGTATATGAGAAACTGTAGTGCTGAGATGGTTGATTGTCTTTTAAACGCCTCTCGTTTATCAGTGAGTTTTAGAGCAATTCCAAAGGCACGATAGTTCCGATAATTTATAAGAATTTGGGTAAAATCGTTATTTAACCCGTTAATCCTTTTTAAACTCAGCACTTTTGATGGAGCATAGCTCCGGTCCTCTAAACATTTAAAACGCATACGTAAAAAAGACGTAAAAACGATGGAAAGCAGAGGAGGAGAAGTTGGACGAGTCGTACGGCTCGACGTGATTGAAAAGCTCGGTAAAAAAAACGGCAAAAAATTCAAAGAGGAAAAAATTGTGTTTAGACAGCTAGGATAGATCTTAGAGCTGCATGCATTTATATCGAGTTGTAACGAAAGTGTGATGGCCGTAAGAAAAAAAAAACTTTATGCACGAAACGTTTCGATCGCAAGTGTACCGTACCTTATCTTTGCACGCTGAAAGTAGTA] [+] EMBL BI513614 [GGTGCAGTGCATTTTTTTTTTTATTAATAATCCAACGTGCTGCCGAGTAATATATTCATAGCAATTTACATTGAAATGTCACGAAAGTTGCATTAATAACGTTCGAGAACCGAGTTTCTTCGCAACAATTGGATAAAGCTTTGAGNAATTGTATATGAGAAACTGTAGTGCTGAGATGGTNGATTGTCTTTTAAACGCCTCTCGTTTATCANNGAGTTTTAGAGCAATTCCAAAGGCACGATAGTTCCGATAATTTATAAGAATTTGGGTAAAATCGTTATTTAACCCGTTAATCCTTTTTAAACTCAGNACTTTTGATGGAGCATAGCTCCGGTCCTCTAAACATTTAAAACGCATACGTAAAAAAGACGTAAAAACGATGG ] [+] EMBL BI510604 [ AATGTCACGAAAGTTGCATTAATAACGTTCGAGAACCGAGTTTCTTCGCAACAATTGGATAAAGCTTTGAGCAATTGTATATGAGAAACTGTAGTGCTGAGATGGTTGATTGTCTTTTAAACGCCTCTCGTTTATCAGTGAGTTTTAGAGCAATTCCAAAGGCACGATAGTTCCGATAATTTATAAGAATTTGGGTAAAATCGTTATTTAACCCGTTAATCCTTTTTAAACTCAGCACTTTTGATGGAGCATAGCTCCGGTCCTCTAAACATTTAAAACGCATACGTAAAAAAGACGTAAAAACGATGGAAAGCAGAGGAGGAGAAGTTGGACGAGTCGTACGGCTCGACGTGATTGAAAAGCTCGGT AAAAAAACGGCAAAAAATTCAAAGAGGAAAAAATTGTGTTTAGACAGCTAGGATAGATCTTAGAGCTGCATGCATTTATATCGAGTTGTAACGAAAGTGTGATGGCCGTAA AAAAAAAAAACTTTATGCACGAAACGTTTCGATCGCAAGTGTACCGTACCTTATCTTTGCACGCTGAAAGTAGTA] [+] EMBL BI512829 [ ACGTTCGAGAACCGAGTTTCTTCGCAACAATTGGATAAAGCTTTGAGCAATTGTATATGAGAAACTGTAGTGCTGAGATAGTTGATTGTCTTTTAAACGCCTCTCGTTTATCAGTGAGTTTTAGAGCAATTCCAAAGGCACGATAGTTCCGATAATTTATAAGAATTTGGGTAAAATCGTTATTTAACCCGTTAATCCTTTTTAAACTCAGCACTTTTGATGGAGCATAGCTCCGGTCCTCTAAACATTTAAAACGCATACGTAAAAAAGACGTAAAAACGATGGAAAGCAGAGGAGGAGAAGTTGGACGAGTCGTACGGCTCGACGTGATTGAAAAGCTCGGTAAAAAAAACGGCAAAAAATTCAAAGAGGAAAAAATTGTGTTTAGACAGCTAGGATAGATCTTAGAGCTGCATGCATTTATATCGAGTTGTAACGAAAGTGTGATGGCCGTAAGAAAAAAAAAACTTTATGCACGAAACGTTTCGATCGCAAGTGTACCGTACCTTATCTTTGCACGCTGAAAGTAGT ] consensusID : consensus_469#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 201 fasta sequence [CCTTATCTTTGCACGCTGAAAGTAGTATTATCTTTTTACGTGCGNTATACGTTCGATCGACGAAATCGATATCGGTTCAAGATTCGATAGAGGTTAGGAGCTACTGATATGTTGATTATATCTAGCATAGCGTTCGACATGGGAATGAAAGCTGAGTATCCCTGACCTGACCGCTAAAAATCTGCCCCCTTGATTGCTTCA] [+] EMBL BI517010 [CCTTATCTTTGCACGCTGAAAGTAGTATTATCTTTTTACGTGCGNTATACGTTCGATCGACGAAATCGATATCGGTTCAAGATTCGATAGAGGTTAGGAGCTACTGATATGTTGATTATATCTAGCATAGCGTTCGACATGGGAATGAAAGCTGAGTATCCCTGACCTGACCGCTAAAAATCTGCCCCCTTGATTGCTTCA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_469#0 GGTGCAGTGCATTTTTTTTTTTATTAATAATCCAACGTGCTGCCGAGTAATATATTCATA 60 consensus_469#1 ------------------------------------------------------------ consensus_469#0 GCAATTTACATTGAAATGTCACGAAAGTTGCATTAATAACGTTCGAGAACCGAGTTTCTT 120 consensus_469#1 ---CCTTATCTTTGCACGCT--GAAAGTAGTATTATCTTTTTACGTGCGNTATACGTTCG 55 *** ** * * ****** * **** * ** * * consensus_469#0 CGCAAC-AATTGGATAAAGCTTTGAGCAATTGTATATGAGAAACTGTAGTGCTGAGATGG 179 consensus_469#1 ATCGACGAAATCGATATCGGTTCAAG--ATTCGATA-GAGGTTAGGAGCTACTGATATG- 111 * ** ** * **** * ** ** *** *** *** * * **** *** consensus_469#0 TTGATTGTCTTTTAAACGCCTCTCGTTTATCAGTGAGTTTTAGAGCAATTCCAAAGGCAC 239 consensus_469#1 TTGATTATATCTAGCATAGCGTTCG---ACATGGGAATGAAAGCTGAGTATCCCTGACCT 168 ****** * * * * * *** * * ** * ** * * * * * consensus_469#0 GATAGTTCCGATAATTTATAAGAATTTGGGTAAAATCGTTATTTAACCCGTTAATCCTTT 299 consensus_469#1 GACCGCT--AAAAATCTGCCC---CCTTGATTGCTTCA---------------------- 201 ** * * * *** * * * * ** consensus_469#0 TTAAACTCAGCACTTTTGATGGAGCATAGCTCCGGTCCTCTAAACATTTAAAACGCATAC 359 consensus_469#1 ------------------------------------------------------------ consensus_469#0 GTAAAAAAGACGTAAAAACGATGGAAAGCAGAGGAGGAGAAGTTGGACGAGTCGTACGGC 419 consensus_469#1 ------------------------------------------------------------ consensus_469#0 TCGACGTGATTGAAAAGCTCGGTAAAAAAAACGGCAAAAAATTCAAAGAGGAAAAAATTG 479 consensus_469#1 ------------------------------------------------------------ consensus_469#0 TGTTTAGACAGCTAGGATAGATCTTAGAGCTGCATGCATTTATATCGAGTTGTAACGAAA 539 consensus_469#1 ------------------------------------------------------------ consensus_469#0 GTGTGATGGCCGTAAGAAAAAAAAAACTTTATGCACGAAACGTTTCGATCGCAAGTGTAC 599 consensus_469#1 ------------------------------------------------------------ consensus_469#0 CGTACCTTATCTTTGCACGCTGAAAGTAGTA 630 consensus_469#1 ------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |