These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_519#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 439 fasta sequence [ACGATATCAGTGCACAAGGCATTACCTTAGTAGAAGATATCAACAAGAAACGGGAACCTTTGCCTACCATGGAAGCAATCTACCTGATCACACCATGCAATTCCTCTGTCCAAAAGTTAATCGAAGACTTCAGTAATCCTACCAGGACTTCTTACAAAGTAGCCCATGTTTATTTCACAGAAGCATGTCCAGATGAATTGTTCAAAGAATTGTGTCACTCGCTGGTAGCTAAACGCATAAAGACACTAAAAGAGATCAACATCGCTTTCATACCGTACGAAGAACAGGTTTTCTCCTTGGATTCGGCTGAAACATTTGCTTGCTTTTATAATGCTTCCTTTTCCAACTTGAGAACGGCCAATATGGAAAGAATAGCTGAACAAATTGCAACACTTTGTGCTACTCTTGGAGAATATCCATCAGTTAGAAAAAAAAAAAA] [+] EMBL BI506258 [ACGATATCAGTGCACAAGGCATTACCTTAGTAGAAGATATCAACAAGAAACGGGAACCTTTGCCTACCATGGAAGCAATCTACCTGATCACACCATGCAATTCCTCTGTCCAAAAGTTAATCGAAGACTTCAGTAATCCTACCAGGACTTCTTACAAAGTAGCCCATGTTTATTTCACAGAAGCATGTCCAGATGAATTGTTCAAAGAATTGTGTCACTCGCTGGTAGCTAAACGCATAAAGACACTAAAAGAGATCAACATCGCTTTCATACCGTACGAAGAACAGGTTTTCTCCTTGGATTCGGCTGAAACATTTGCTTGCTTTTATAATGCTTCCTTTTCCAACTTGAGAACGGCCAATATGGAAAGAATAGCTGAACAAATTGCAACACTTTGTGCTACTCTTGGAGAATATCCATCAGTTAGAAAAAAAAAAAA] [+] EMBL BI510296 [ACGATATCAGTGCACAAGGCATTACCTTAGTAGAAGATATCAACAAGAAACGGGAACCTTTGCCTACCATGGAAGCAATCTACCTGATCACACCATGCAATTCCTCTGTCCAAAAGTTAATCGAAGACTTCAGTAATCCTACCAGGACTTCTTACAAAGTAGCCCATGTTTATTTCACAGAAGCATGTCCAGATGAATTGTTCAAAGAATTGTGTCACTCGCTGGTAGCTAAACGCATAAAGACACTAAAAGAGATCAACATCGCTTTCATACCGTACGAAGAACAGGTTTTCTCCTTGGATTCGGCTGAAACATTTGCTTGCTTTTATAATGCTTCCTTTTCCAACTTGAGAACGGCCAATATGGAAAGAATAGCTGAACAAATTGCAACACTTTGTGCTACTCTTGGAGAATATCCATCAGTTAGAAAAA ] consensusID : consensus_519#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 398 fasta sequence [GATAAATTGGCCATGAGGATGGTATCTGCGTGTTGTAAAATGCACGATATCAGTGCACAAGGCATTACCTTAGTAGAAGATATCAACAAGAAACGGGAACCTTTGCCTACCATGGAAGCAATCTACCTGATCACACCATGCAATTCCTCTGTCCAAAAGTTAATCGAAGACTTCAGTAATCCTACCAGGACTTCTTACAAAGTAGCCCATGTTTATTTCACAGAAGTGTGTCCGGAGGAGCTGTTCAATGAACTCTGCAAGTCTCTCGCCGCTAAAAAGATCAAAACCCTGAAAGAGATCAACATCGCTTTCTTGCCTTACGAATCGCAGGTTTTCTCCTTGGATTCGGCTGAAACATTTGCTTGCTTTTATAATGCTTCAGCCGAATCAAAAAAAAA] [+] EMBL BI503510 [GATAAATTGGCCATGAGGATGGTATCTGCGTGTTGTAAAATGCACGATATCAGTGCACAAGGCATTACCTTAGTAGAAGATATCAACAAGAAACGGGAACCTTTGCCTACCATGGAAGCAATCTACCTGATCACACCATGCAATTCCTCTGTCCAAAAGTTAATCGAAGACTTCAGTAATCCTACCAGGACTTCTTACAAAGTAGCCCATGTTTATTTCACAGAAGTGTGTCCGGAGGAGCTGTTCAATGAACTCTGCAAGTCTCTCGCCGCTAAAAAGATCAAAACCCTGAAAGAGATCAACATCGCTTTCTTGCCTTACGAATCGCAGGTTTTCTCCTTGGATTCGGCTGAAACATTTGCTTGCTTTTATAATGCTTCAGCCGAATCAAAAAAAAA] [+] EMBL BI505573 [ CCATGGAAGCAATCTACCTGATCACACCATGCAATTCCTCTGTCCAAAAGTTAATCGAAGACTTCAGTAATCCTACCAGGACTTCTTACAAAGTAGCCCATGTTTATTTCACAGAAGTGTGTCCGGAGGAGCTGTTCAATGAACTCTGCAAGTCTCTCGCCGCTAAAAAGAT ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_519#0 -------------------------------------------ACGATATCAGTGCACAA 17 consensus_519#1 GATAAATTGGCCATGAGGATGGTATCTGCGTGTTGTAAAATGCACGATATCAGTGCACAA 60 ***************** consensus_519#0 GGCATTACCTTAGTAGAAGATATCAACAAGAAACGGGAACCTTTGCCTACCATGGAAGCA 77 consensus_519#1 GGCATTACCTTAGTAGAAGATATCAACAAGAAACGGGAACCTTTGCCTACCATGGAAGCA 120 ************************************************************ consensus_519#0 ATCTACCTGATCACACCATGCAATTCCTCTGTCCAAAAGTTAATCGAAGACTTCAGTAAT 137 consensus_519#1 ATCTACCTGATCACACCATGCAATTCCTCTGTCCAAAAGTTAATCGAAGACTTCAGTAAT 180 ************************************************************ consensus_519#0 CCTACCAGGACTTCTTACAAAGTAGCCCATGTTTATTTCACAGAAGCATGTCCAGATGAA 197 consensus_519#1 CCTACCAGGACTTCTTACAAAGTAGCCCATGTTTATTTCACAGAAGTGTGTCCGGAGGAG 240 ********************************************** ***** ** ** consensus_519#0 TTGTTCAAAGAATTGTGTCACTCGCTGGTAGCTAAACGCATAAAGACACTAAAAGAGATC 257 consensus_519#1 CTGTTCAATGAACTCTGCAAGTCTCTCGCCGCTAAAAAGATCAAAACCCTGAAAGAGATC 300 ******* *** * ** * ** ** * ****** ** ** ** ** ********* consensus_519#0 AACATCGCTTTCATACCGTACGAAGAACAGGTTTTCTCCTTGGATTCGGCTGAAACATTT 317 consensus_519#1 AACATCGCTTTCTTGCCTTACGAATCGCAGGTTTTCTCCTTGGATTCGGCTGAAACATTT 360 ************ * ** ****** ********************************* consensus_519#0 GCTTGCTTTTATAATGCTTCCTTTTCCAACTTGAGAACGGCCAATATGGAAAGAATAGCT 377 consensus_519#1 GCTTGCTTTTATAATGCTTCAG---CCGAATCAAAAAAAAA------------------- 398 ******************** ** * * * ** consensus_519#0 GAACAAATTGCAACACTTTGTGCTACTCTTGGAGAATATCCATCAGTTAGAAAAAAAAAA 437 consensus_519#1 ------------------------------------------------------------ consensus_519#0 AA 439 consensus_519#1 -- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |