Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Apis mellifera
cluster # 530 cluster # 530       Sequences # 4       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_530#0 length = 890 sequences # 4  
consensusID : consensus_530#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 890
fasta sequence 
                              [TAGTTCGATCCCAGCCAGCCGACCAGCCACCCTCTGGGCGCAGGAGCAACGAGAAAAGG---CTACCTTTTGCCTTCGTTTCCTTTTTCTTGTCATTCTTAACTTTCTTCATACGCGCCTTTGTTTCCCGGTACATATGATAATGAAGAATCTTCTTGTTCAATCCCTTGTCCTTTTTTGTATTAAATAGAATAACGAGCAGTGTATGAAGGAATATTATCGGTGATAGGTTTCGATTAGTTCGGGAAAAGAAAAGTGCACACGTTTCAAGGCCGAAACGAGCCTTGGTCGGTCGGTTGGTCGATCGGTCGAGTGCGTTGCGTGTAAGCGCGTGTGATGTGTTGAATGGTGGAAAGATCGTTTTGAATAGTGTCTCGTTTCGTTTTCGTCATCGAAACGATGAGAATGAATTCTTCTTGAAGTAGAGAATCGTCGTGGAGGGAGCCAGATGTAAAGAGAGAAGAAATCAAGAAACGGAAGAAGAAAGAGTGGTGCAGGATTATCGGAGACAAAGCAAAGCAAACGAGTCGAATAAGAGAAGGACACATAGAGACACGGTGTGCGCGCATATGTATACAGCGTGAAATATACACAAATGTTCGAAGAAATAAAAGGTTATTCGAAATAGGTGATGTGGAAGTTGACAATAAGATGATTCAAGGTTTTCGCCATGAGATGGGGATCGATCAAATTTTCAATATTGTTCTTCGACGGAACATTGCAATAATGCGGAGAGACGTTCGCTCGAAATGAAAAATGTGCATATTTTTCACGTTGTTAGGGCGATAATTAACGAATNNATGCCGAATTAATCGAATCGATTCTACAAAAAGGAATTAAACTGTTCCGGTGTAATGATGATACACATCACCAGGGGAACTTTCTACGAACAA]

[+] EMBL BI505713             [TAGTTCGATCCCAGCCAGCCGACCAGCCACCCTCTGGGCGCAGGAGCAACGAGAAAAGG   CTACCTTTTGCCTTCGTTTCCTTTTTCTTGTCATTCTTAACTTTCTTCATACGCGCCTTTGTTTCCCGATACATATGATAATGAAGAATCTTTTTGTTCAATCCCTTGTCCTTTTTTGTATTAAATAGAATAACGAGCAGTGTATGAAGGAATATTATCGGTGATAGGTTTCGATTAGTTCGGGAAAAGAAAAGTGCACACGTTTCAAGGCCGAAACGAGCCTTGGTCGGTCGGTTGGTCGATCGGTCGAGTGCGTTGCGTGTAAGCGCGTGTGATGTGTTGAATGGTGGAAAGATCGTTTTGAATAGTGTCTCGTTTCGTTTTCGTCATCGAAACGATGAGAATGAATTCTTCTTGAAGTAGAGAATCGTCGTGGAGGGAGCCAGATGTAAAGAGAGAAGAAATCAAGAAACGGAAGAAGAAAGAGTGGTGCAGGATTATCGGAGACAAAGCAAAGCAAACGAGTCGAATAAGAGAAGGACACATAGAGACACGGTGTGCGCGCATATGTATACAGCGTGAAAT                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BI509557             [                                                     AAAAGGCGACTACCTTTTGCCTTCGTTTCCTTTTTCTTGTCATTCTTAACTTTCTTCATACGCGCCTTTGTTTCCCGGTACATATGATAATGAAGAATCTTCTTGTTCAATCCCTTGTCCTTTTTTGTATTAAATAGAATAACGAGCAGTGTATGAAGGAATATTATCGGTGATAGGTTTCGATTAGTTCGGGAAAAGAAAAGTGCACACGTTTCAAGGCCGAAACGAGC   GGTCGGTCGGTTGGTCGATCGGTCGAGTGCGTTGCGTGTAAGCGCGTGTGATGTGTTGAATGGTGGAAAGATCGTTTTGAATAGTGTCTCGTTTCGTTTTCGTCATCGAAACGATGAGAATGAATTCTTCTTGAAGTAGAGAATCGTCGTGGAGGGAGCCAGATGTAAAGAGAGAAGAAATCAAGAAACGGAAGAAGAAAGAGTGGTGCAGGATTATCGGAGACAAAGCAAAGCAAACGAGTCGAATAAGAGAAGGACACATAGAGACACGGTGTGCGCGCATATGTATACAGCGTGAAATATACACAAATG                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BI510023             [                                                                                                                                                                                                                      TATTATCGGTGATAGGTTTCGATTAGTTCGGGAAAAGAAAAGTGCACACGTTTCAAGGCCGAAACGAGCCTTGGTCGGTCGGTTGGTCGATCGGTCGAGTGCGTTGCTTGTAAGCGCGTGTGATGTGTTGAATGGTGGAAAGATCGTTTTGAATAGTGTCTCGTTTCGTTTTCGTCATCGAAACGATGAGAATGAATTCTTCTTGAAGTAGAGAATCGTCGTGGAGGGAGCCAGATGTAAAGAGAGAAGAAATCAAGAAACGGAAGAAGAAAGAGTGGTGCAGGATTATCGGAGACAAAGCAAAGCAAACGAGTCGAATAAGAGAAGGACACATAGAGACACGGTGTGCGCGCATATGTATACAGCGTGAAATATACACAAATGTTCGAAGAAATAAAAGGTTATTCGAAATAGGTGATGTGGAAGTTGACAATAAGATGATTCAAGGTTTTCACTATGAGATGGGGATCGATCAAATTTTCAATATTGTTCTTCGACGGAACATTGCAATAATGCGGAGAGACGTTCGCTCGAAATGAAAAATGTGCATATTTTTCACGTTGTTAGGGCGATAATTAACGAATNNATGCCGAATTAATCGAATCGATTCTACAAAAAGGAATTAAACTGTTCCGGTGTAA                                      ]
[-] EMBL BI504740             [                                                                                                                                                                                                                                                                                                               ATCGGTCGAGTGCGTTGCGTGTAAGCGCGTGTGATGTGTTGAATGGTGGAAAGATCGTTTTGAATAGTGTCTCGTTTCGTTTTCGTCATCGAAACGATGAGAATGAATTCTTCTTGAAGTAGAGAATCGTCGTGGAGGGAGCCAGATGTAAAGAGAGAAGAAATCAAGAAACGGAAGAAGAAAGAGTGGTGCAGGATTATCGGAGACAAAGCAAAGCAAACGAGTCGAATAAGAGAAGGACACATAGAGACACGGTGTGCGCGCATATGTATACAGCGTGAAATATACACAAATGTTCGAAGAAATAAAAGGTTATTCGAAATAGGTGATGTGGAAGTTGACAATAAGATGATTCAAGGTTTTCGCCATGAGATGGGGATCGATCAAATTTTCAATATTGTTCTTCGACGGAACATTGCAATAATGCGGAGAGACGTTCGCTCGAAATGAAAAATGTGCATATTTTTCACGTTGTTAGGGCGATAATTAACGAATCCATGCCGAATTAATCGAATCGATTCTACAAAAAGGAATTAAATTGTTCCGGTGTAATGATGATACACATCACCAGGGGAACTTTCTACGAACAA]




>consensus_530#0
TAGTTCGATCCCAGCCAGCCGACCAGCCACCCTCTGGGCGCAGGAGCAACGAGAAAAGGC
TACCTTTTGCCTTCGTTTCCTTTTTCTTGTCATTCTTAACTTTCTTCATACGCGCCTTTG
TTTCCCGGTACATATGATAATGAAGAATCTTCTTGTTCAATCCCTTGTCCTTTTTTGTAT
TAAATAGAATAACGAGCAGTGTATGAAGGAATATTATCGGTGATAGGTTTCGATTAGTTC
GGGAAAAGAAAAGTGCACACGTTTCAAGGCCGAAACGAGCCTTGGTCGGTCGGTTGGTCG
ATCGGTCGAGTGCGTTGCGTGTAAGCGCGTGTGATGTGTTGAATGGTGGAAAGATCGTTT
TGAATAGTGTCTCGTTTCGTTTTCGTCATCGAAACGATGAGAATGAATTCTTCTTGAAGT
AGAGAATCGTCGTGGAGGGAGCCAGATGTAAAGAGAGAAGAAATCAAGAAACGGAAGAAG
AAAGAGTGGTGCAGGATTATCGGAGACAAAGCAAAGCAAACGAGTCGAATAAGAGAAGGA
CACATAGAGACACGGTGTGCGCGCATATGTATACAGCGTGAAATATACACAAATGTTCGA
AGAAATAAAAGGTTATTCGAAATAGGTGATGTGGAAGTTGACAATAAGATGATTCAAGGT
TTTCGCCATGAGATGGGGATCGATCAAATTTTCAATATTGTTCTTCGACGGAACATTGCA
ATAATGCGGAGAGACGTTCGCTCGAAATGAAAAATGTGCATATTTTTCACGTTGTTAGGG
CGATAATTAACGAATNNATGCCGAATTAATCGAATCGATTCTACAAAAAGGAATTAAACT
GTTCCGGTGTAATGATGATACACATCACCAGGGGAACTTTCTACGAACAA

clustalw multiple alignements is not computed in this case
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)