These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_537#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 517 fasta sequence [AAAGATCGCTATTTATTATACTTAGTTTATTTTCTTCGTCTATATTCCCCACCTCTCCCTCTCTCTATCTCTTCCCTCTCTCGTTTTTTCCTCTTTTCTCCTTTCTCGAGCGCAAATCTATTGTCTCCGGGGGAGGGAAAAAAAGAAAAAAAATAAANNAAGAATGATCCCTGTCTCGCGTTCGAATCGAGGCGACGACCAACCACGGTGACGACGACACGATCGACGGGCGAAACGATATCGGCGGATAACGATAGCAACGATAACGAAAAACTACCCTTAACATCGTCGATCGATTGTTACACGCGTGGCACGGGTGGCGATCTTGTCGATCTCTTATCGGGACTTGGGGAGGGGGGACGATAATGGAAAAAAAAAAAAAAATAAAATAAAAATCGCACTATCTTTATCTTTATTTATTTCTGTAATAAGATTTATCGATGCTTAATGCTCATTAACGCTTTTCTTAGCAGTTTTGTTCGATTATTGTCGGCGTTCCTTTCTTGCGTAATTATCT] [-] EMBL BI516171 [AAAGATCGCTATTTATTATACTTAGTTTATTTTCTTCGTCTATATTCCCCACCTCTCCCTCTCTCTATCTCTTCCCTCTCTCGTTTTTTCCTCTTTTCTCCTTTCTCGAGCGCAAATCTATTGTCTCCGGGGGAGGGAAAAAAAGAAAAAAAATAANNNAAGAATGATCCCTGTCTCGCGTTCGAATCGAGGCGACGACCAACCACGGTGACGACGACACGATCGACGGGCGAAACGATATCGGCGGATAACGATAGCAACGATAACGAAAAACTACCCTTAACATCGTCGATCGATTGTTACACGCGTGGCACGGGTGGCGATCTTGTCGATCTCTTATCGGGACTTGGGGAGGGGGGACGATAATGGAAAAATAAAATAAAATAAAATAAAAATCGCACTATCTTTATCTTTATTTATTTCTGTAATAAGATTTATCGATGCTTAATGCTCATTAACGCTTTTCTTAGCAGTTTTGTTCGATTATTGTCGGCGTTCCTTTCTTGCGTAATTATCT] [+] EMBL BI509827 [ TCCTTTCTCGAGCGCAAATCTATTGTCTCCGGGGGAGGGAAAAAAAGAAAAAAAATAAAACAAGAATGATCCCCGTCTCGCGTTCGAATCGAGGCGACGACCAACCACGGTGACGACGACACGATCGACGGGCGAAACGATATCGGCGGATAACGATAGCAACGATAACGAAAAACTACCCTTAACATCGTCGATCGATTGTTACACGCGTGGCACGGGTGGCGATCTTGTCGATCTCTTATCGGGACTTGGGGAGGAGGGACGATAATGGAAAAAAAAAAA ] [-] EMBL BI505589 [ tttttTCTATTGTCTTCGGGGGAGGGAAAAAAAGAAAAAAAATAAANNAAGAATGATCCCTGTCTCGCGTTCGAATCGAGGCGACGACCAACCACGGTGACGACGACACGATCGACGGGCGAAACGATATCGG CGATAGCAACGATAATGAAAAACTACCCTTAACATCGTCGATCGATTGTTACACGCGTGGCACGGGTGGCGATCTTGTCGATCTCTTATCGGGACT ] consensusID : consensus_537#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 361 fasta sequence [CAACCACGGTGACGACGACACGATCGACGGGCGAAACGATATCGGCGATAGCAACGATAACGAAAAACTACCCTTAACATCGTCGATCGATTGTTACACGCGTGGCACGGGTGGCGATCTTGTCGATCTCTTATCGGGACTTGGGGAGGGGGGACGATAATGGAAAAATAAAATAAAATAAAATAAAACGAATAAAAGAAGAGAGACACTTGAAAGGATTACGTTACGAGAAAGCAAAATGATACAAGGAAGCAAAAAAACAAGGAGGATCGTTCGTCCCGTGAGAACATCCTCGCATTTACACTCTAATTACGGTTATTTTACGGGGATTAACCACGCGAGGAACGAGTAAGAAGAAGAA] [-] EMBL BI516145 [CAACCACGGTGACGACGACACGATCGACGGGCGAAACGATATCGGCGATAGCAACGATAACGAAAAACTACCCTTAACATCGTCGATCGATTGTTACACGCGTGGCACGGGTGGCGATCTTGTCGATCTCTTATCGGGACTTGGGGAGGGGGGACGATAATGGAAAAATAAAATAAAATAAAATAAAACGAATAAAAGAAGAGAGACACTTGAAAGGATTACGTTACGAGAAAGCAAAATGATACAAGGAAGCAAAAAAACAAGGAGGATCGTTCGTCCCGTGAGAACATCCTCGCATTTACACTCTAATTACGGTTATTTTACGGGGATTAACCACGCGAGGAACGAGTAAGAAGAAGAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_537#0 AAAGATCGCTATTTATTATACTTAGTTTATTTTCTTCGTCTATATTCCCCACCTCTCCCT 60 consensus_537#1 ------------------------------------------------------------ consensus_537#0 CTCTCTATCTCTTCCCTCTCTCGTTTTTTCCTCTTTTCTCCTTTCTCGAGCGCAAATCTA 120 consensus_537#1 ------------------------------------------------------------ consensus_537#0 TTGTCTCCGGGGGAGGGAAAAAAAGAAAAAAAATAAANNAAGAATGATCCCTGTCTCGCG 180 consensus_537#1 ------------------------------------------------------------ consensus_537#0 TTCGAATCGAGGCGACGACCAACCACGGTGACGACGACACGATCGACGGGCGAAACGATA 240 consensus_537#1 -------------------CAACCACGGTGACGACGACACGATCGACGGGCGAAACGATA 41 ***************************************** consensus_537#0 TCGGCGGATAACGATAGCAACGATAACGAAAAACTACCCTTAACATCGTCGATCGATTGT 300 consensus_537#1 TCGGCG-------ATAGCAACGATAACGAAAAACTACCCTTAACATCGTCGATCGATTGT 94 ****** *********************************************** consensus_537#0 TACACGCGTGGCACGGGTGGCGATCTTGTCGATCTCTTATCGGGACTTGGGGAGGGGGGA 360 consensus_537#1 TACACGCGTGGCACGGGTGGCGATCTTGTCGATCTCTTATCGGGACTTGGGGAGGGGGGA 154 ************************************************************ consensus_537#0 CGATAATGGAAAAAAAAAAAAAAATAAAATAAAA-----ATCGCACTATCTTTATCTTTA 415 consensus_537#1 CGATAATGGAAAAATAAAATAAAATAAAATAAAACGAATAAAAGAAGAGAGACACTTGAA 214 ************** **** ************** * * * * * * consensus_537#0 TTTATTTC--TGTAATAAGATTTATCGATGCTTA-ATGCTCATTAACGCTTTTCTTAGCA 472 consensus_537#1 AGGATTACGTTACGAGAAAGCAAAATGATACAAGGAAGCAAAAAAACAAGGAGGATCGTT 274 *** * * * ** * *** * * ** * *** * * consensus_537#0 -GTTTTGTTCGATTATTGTCGGCGTTCCTTTCTTGC-GTAATTATCT------------- 517 consensus_537#1 CGTCCCGTGAGAACATCCTCGCATTTACACTCTAATTACGGTTATTTTACGGGGATTAAC 334 ** ** ** ** *** ** * *** **** * consensus_537#0 --------------------------- consensus_537#1 CACGCGAGGAACGAGTAAGAAGAAGAA 361 |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |