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Apis mellifera
cluster # 637 cluster # 637       Sequences # 4       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_637#0 length = 1223 sequences # 3  
consensus_637#1 length = 607 sequences # 1  

consensusID : consensus_637#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1223
fasta sequence
                              [TTAGCCGTTCCGGCATATGAGTCGTCGTTCACGCGACTGGGCCGTGTTTCACAATAATCTCTCGTGTAATCTCTCGTGTATTCGATAACTAATTGTTTTTTATTAGTGCGATTATCTCATTATCTCATGGTGTGATCGTTGACTGAAACCACTCAAAGTTCACTCGACCATTGAACTTTGATTATTACGATATTTTTTTTCCTCCCGGATTTAACGACAATTTAAGCGATTGTATACATATATTTTTTCATGAAAAAAAAAAAAAAGAAAACACTTCTCACTCGTCCCTTCATTCTTTTCGCCTGTTACAGAAGAATAGTATGTATAAAGTACTTCACAATCAAGACATAAAACACGAGTGCTCGCGGTCAGGGGGACTGCACGCTTATCCTGATCATTTCAGGGAACCTAAAAAGCTTTACCTCTAAACCAGCCGTCTGCTAAATGATCATTTAAAGGTTCCTGTCCTCTGGTAGGACTTTGTATATAGTGTAAATATCGCTTTTCTAACAAAGGATCTCGCTCAAATAAAAGAAAAAAAAAAAAAAAAAACGAGCAAGCTCGAAGAATCGAAACAAGTCACGCGGGGATTTCAAGGAGTCGAGAGAATTCGAAAGATTGCACTATTCCAAACCCCATATATAATATCCGACGCATGCATCAACCTAGAACGCACTGACTCAGTCAACTAGTTCGCAAAACGCAACAAAAGAAATAAAGGAAAGAGGAAGATTGTTGGGAGAGAAAGAACGAGTGAAAAGAACGAGAGCACAAGATGAAGCAACAAGCGTCGGAAGAATTCCCTTTATGGATAAAGTTACTTTCCGCAGGCACAGCAGCCTGTATCGCTGATTTAGCGACGTTTCCTTTGGACACCGCCAAAGTCAGAATGCAGATTGCCGGAGAAAGTCGTCCTCTTCTATTGGCGACTACGGATGGCTCCATGCTCGCGATGCGAAATACGCAACCAGGATTATGGAGGACAGTAAAGAACATCGTCAGACTCGAAGGAGCAAGGTACGTTATTCATGATCCTATAGTAAATTTAAGAACAAGGGGTAGGTAAAAACCGATTACATTATTGTACATAAATATAATTAGCGTATACATATATATACATATTTCTTCCGATTCGAATCAAAGTTTATATACACAGCGGGCACTTTTTCGTGCCCGCTCGAAATATGATAATTATTTGATTACGTAATTCACTTCAACTTGAA]

[-] EMBL BI509202             [TTAGCCGTTCCGGCATATGAGTCGTCGTTCACGCGACTGGGCCGTGTTTCACAATAATCTCTCGTGTAATCTCTCGTGTATTCGATAACTAATTGTTTTTTATTAGTGCGATTATCTCATTATCTCATGGTGTGATCGTTGACTGAAACCACTCAAAGTTCACTCGACCATTGAACTTTGATTATTACGATATTTTTTTTCCTCCCGGATTTAACGACAATTTAAGCGATTGTATACATATATTTTTTCATGAAAAAAAAAAAAAAGAAAACACTTCTCACTCGTCCCTTCATTCTTTTCGCCTGTTACAGAAGAATAGTATGTATAAAGTACTTCACAATCAAGACATAAAACACGAGTGCTCGCGGTCAGGGGGACTGCACGCTTATCCTGATCATTTCAGGGAACCTAAAAAGCTTTACCTCTAAACCAGCCGTCTGCTAAATGATCATTTAAAGGTTCCTGTCCTCTGGTAGGACTTTGTATATAGTGTAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BE844284             [                                                                                                                                                                                                                                                                                                                            TAGTATGTATAAAGTACTTCACAATCAAGACATAAAACACGAGTGCTCGCGGTCAGGGGGACTGCACGCTTATCCTGATCATTTCAGGGAACCTAAAAAGCTTTACCTCTAAACCAGCCGTCTGCTAAATGATCATTTAAAGGTTCCTGTCCTCTGGTAGGACTTTGTATATAGTGTAAATATCGCTTTTCTAACAAAGGATCTCGCTCAAATAAAAGAAAAAAAAAAAAAAAAAACGAGCAAGCTCGAAGAATCGAAACAAGTCACGCGGGGATTTCAAGGAGTCGAGAGAATTCGAAAGATTGCACTATTCCAAACCCCATATATAATATCCGACGCATGCATCAACCTAGAACGCACTGACTCAGTCAACTAGTTCGCAAAACGCAACAAAAGAAATAAAGGAAAGAGGAAGATTGTTGGGAGAGAAAGAACGAGTGAAAAGAACGAGAGCACAAGATGAAGCAACAAGCGTCGGAAGAATTCCCTTTATGGATAAAGTTACTTTCCGCAGGCACAGCAGCCTGTATCGCTGATTTAGCGACGTTTCCTTTGGACACCGCCAAAGTCAGAATGCAGATTGCCGGAGAAAGTCGTCCTCTTCTATTGGCGACTACGGAT                                                                                                                                                                                                                                                                                              ]
[+] EMBL BI505193             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AGAACGCACTGACTCAGTCAACTAGTTCGCAAAACGCAACAAAAGAAATAAAGGAAAGAGGAAGATTGTTGGGAGAGAAAGAACGAGTGAAAAGAACGAGAGCACAAGATGAAGCAACAAGCGTCGGAAGAATTCCCTTTATGGATAAAGTTACTTTCCGCAGGCACAGCAGCCTGTATCGCTGATTTAGCGACGTTTCCTTTGGACACCGCCAAAGTCAGAATGCAGATTGCCGGAGAAAGTCGTCCTCTTCTATTGGCGACTACGGATGGCTCCATGCTCGCGATGCGAAATACGCAACCAGGATTATGGAGGACAGTAAAGAACATCGTCAGACTCGAAGGAGCAAGGTACGTTATTCATGATCCTATAGTAAATTTAAGAACAAGGGGTAGGTAAAAACCGATTACATTATTGTACATAAATATAATTAGCGTATACATATATATACATATTTCTTCCGATTCGAATCAAAGTTTATATACACAGCGGGCACTTTTTCGTGCCCGCTCGAAATATGATAATTATTTGATTACGTAATTCACTTCAACTTGAA]


>consensus_637#0 TTAGCCGTTCCGGCATATGAGTCGTCGTTCACGCGACTGGGCCGTGTTTCACAATAATCT CTCGTGTAATCTCTCGTGTATTCGATAACTAATTGTTTTTTATTAGTGCGATTATCTCAT TATCTCATGGTGTGATCGTTGACTGAAACCACTCAAAGTTCACTCGACCATTGAACTTTG ATTATTACGATATTTTTTTTCCTCCCGGATTTAACGACAATTTAAGCGATTGTATACATA TATTTTTTCATGAAAAAAAAAAAAAAGAAAACACTTCTCACTCGTCCCTTCATTCTTTTC GCCTGTTACAGAAGAATAGTATGTATAAAGTACTTCACAATCAAGACATAAAACACGAGT GCTCGCGGTCAGGGGGACTGCACGCTTATCCTGATCATTTCAGGGAACCTAAAAAGCTTT ACCTCTAAACCAGCCGTCTGCTAAATGATCATTTAAAGGTTCCTGTCCTCTGGTAGGACT TTGTATATAGTGTAAATATCGCTTTTCTAACAAAGGATCTCGCTCAAATAAAAGAAAAAA AAAAAAAAAAAACGAGCAAGCTCGAAGAATCGAAACAAGTCACGCGGGGATTTCAAGGAG TCGAGAGAATTCGAAAGATTGCACTATTCCAAACCCCATATATAATATCCGACGCATGCA TCAACCTAGAACGCACTGACTCAGTCAACTAGTTCGCAAAACGCAACAAAAGAAATAAAG GAAAGAGGAAGATTGTTGGGAGAGAAAGAACGAGTGAAAAGAACGAGAGCACAAGATGAA GCAACAAGCGTCGGAAGAATTCCCTTTATGGATAAAGTTACTTTCCGCAGGCACAGCAGC CTGTATCGCTGATTTAGCGACGTTTCCTTTGGACACCGCCAAAGTCAGAATGCAGATTGC CGGAGAAAGTCGTCCTCTTCTATTGGCGACTACGGATGGCTCCATGCTCGCGATGCGAAA TACGCAACCAGGATTATGGAGGACAGTAAAGAACATCGTCAGACTCGAAGGAGCAAGGTA CGTTATTCATGATCCTATAGTAAATTTAAGAACAAGGGGTAGGTAAAAACCGATTACATT ATTGTACATAAATATAATTAGCGTATACATATATATACATATTTCTTCCGATTCGAATCA AAGTTTATATACACAGCGGGCACTTTTTCGTGCCCGCTCGAAATATGATAATTATTTGAT TACGTAATTCACTTCAACTTGAA



consensusID : consensus_637#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 607
fasta sequence
                              [AGCGACGTTTCCTTTGGACACCGCCAAAGTCAGAATGCAGGTAAATATAATGCATGTTTAATTTATCGATAAGCTTTTGTTCTTACAAATAAAAATTTTCAAAGTCTAGAGATCTAGAGAAAATGTTACTTATTGCAACTTAAGATATAAAGTTTAAATATCTCATTCAATATTTAGTATAAATTTCNNNTTTTTATTTACAGTGTGCTTGCATAATTACAACTTCTTTTTAATTTTTCTTAGGCTATAATATATTATGAAACAATGCAAAATCATGTATTTCATATTAATTTTTAAAATTCATGTTTGATTATACGTATTAATCATCTTGATATCCTTTCTTAGAAAATTTCCATTGTTTCTTACACACGATTAATATTATCATAAATAATTGTATCGCGTAATCAATAAAGTCAATTCTTTTTCATACTTGATTTACTCGATTTCCATTTGAATTCGTTACATCTTTTCAGGATTCAGAGTGGGGATTCAAGGATGTTTGTACAAATATTCTACATGCTTTTTTCCTCTACATAATATTTATACATTGTAATTGGGAAAGAGATGCTTCTTATTACTTAAAATGTTATACTCGCGCAAAATATAA]

[+] EMBL BI504457             [AGCGACGTTTCCTTTGGACACCGCCAAAGTCAGAATGCAGGTAAATATAATGCATGTTTAATTTATCGATAAGCTTTTGTTCTTACAAATAAAAATTTTCAAAGTCTAGAGATCTAGAGAAAATGTTACTTATTGCAACTTAAGATATAAAGTTTAAATATCTCATTCAATATTTAGTATAAATTTCNNNTTTTTATTTACAGTGTGCTTGCATAATTACAACTTCTTTTTAATTTTTCTTAGGCTATAATATATTATGAAACAATGCAAAATCATGTATTTCATATTAATTTTTAAAATTCATGTTTGATTATACGTATTAATCATCTTGATATCCTTTCTTAGAAAATTTCCATTGTTTCTTACACACGATTAATATTATCATAAATAATTGTATCGCGTAATCAATAAAGTCAATTCTTTTTCATACTTGATTTACTCGATTTCCATTTGAATTCGTTACATCTTTTCAGGATTCAGAGTGGGGATTCAAGGATGTTTGTACAAATATTCTACATGCTTTTTTCCTCTACATAATATTTATACATTGTAATTGGGAAAGAGATGCTTCTTATTACTTAAAATGTTATACTCGCGCAAAATATAA]


>consensus_637#1 AGCGACGTTTCCTTTGGACACCGCCAAAGTCAGAATGCAGGTAAATATAATGCATGTTTA ATTTATCGATAAGCTTTTGTTCTTACAAATAAAAATTTTCAAAGTCTAGAGATCTAGAGA AAATGTTACTTATTGCAACTTAAGATATAAAGTTTAAATATCTCATTCAATATTTAGTAT AAATTTCNNNTTTTTATTTACAGTGTGCTTGCATAATTACAACTTCTTTTTAATTTTTCT TAGGCTATAATATATTATGAAACAATGCAAAATCATGTATTTCATATTAATTTTTAAAAT TCATGTTTGATTATACGTATTAATCATCTTGATATCCTTTCTTAGAAAATTTCCATTGTT TCTTACACACGATTAATATTATCATAAATAATTGTATCGCGTAATCAATAAAGTCAATTC TTTTTCATACTTGATTTACTCGATTTCCATTTGAATTCGTTACATCTTTTCAGGATTCAG AGTGGGGATTCAAGGATGTTTGTACAAATATTCTACATGCTTTTTTCCTCTACATAATAT TTATACATTGTAATTGGGAAAGAGATGCTTCTTATTACTTAAAATGTTATACTCGCGCAA AATATAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_637#0      TTAGCCGTTCCGGCATATGAGTCGTCGTTCACGCGACTGGGCCGTGTTTCACAATAATCT 60
consensus_637#1      ------------------------------------------------------------
                                                                                 

consensus_637#0      CTCGTGTAATCTCTCGTGTATTCGATAACTAATTGTTTTTTATTAGTGCGATTATCTCAT 120
consensus_637#1      ------------------------------------------------------------
                                                                                 

consensus_637#0      TATCTCATGGTGTGATCGTTGACTGAAACCACTCAAAGTTCACTCGACCATTGAACTTTG 180
consensus_637#1      ------------------------------------------------------------
                                                                                 

consensus_637#0      ATTATTACGATATTTTTTTTCCTCCCGGATTTAACGACAATTTAAGCGATTGTATACATA 240
consensus_637#1      ------------------------------------------------------------
                                                                                 

consensus_637#0      TATTTTTTCATGAAAAAAAAAAAAAAGAAAACACTTCTCACTCGTCCCTTCATTCTTTTC 300
consensus_637#1      ------------------------------------------------------------
                                                                                 

consensus_637#0      GCCTGTTACAGAAGAATAGTATGTATAAAGTACTTCACAATCAAGACATAAAACACGAGT 360
consensus_637#1      ------------------------------------------------------------
                                                                                 

consensus_637#0      GCTCGCGGTCAGGGGGACTGCACGCTTATCCTGATCATTTCAGGGAACCTAAAAAGCTTT 420
consensus_637#1      ------------------------------------------------------------
                                                                                 

consensus_637#0      ACCTCTAAACCAGCCGTCTGCTAAATGATCATTTAAAGGTTCCTGTCCTCTGGTAGGACT 480
consensus_637#1      ------------------------------------------------------------
                                                                                 

consensus_637#0      TTGTATATAGTGTAAATATCGCTTTTCTAACAAAGGATCTCGCTCAAATAAAAGAAAAAA 540
consensus_637#1      --------------AGCGACGTTTCCTTTGGACACCGCCAAAGTCAGAATGCAGGTAAAT 46
                                   *    ** **   *   * *    *    *** *    **  *** 

consensus_637#0      AAAAAAAAAAAACGAGCAAGCTCGAAGAATCGAAACAAGTCACGCGGGGATTTCAAGGAG 600
consensus_637#1      ATAATGCATGTTTAATTTATCGATAAGCTTTTGTTCTTACAAATAAAAATTTTCAA--AG 104
                     * **   *      *   * *   ***  *     *     *        ******  **

consensus_637#0      TCGAGAGAATTCGAAAGATTGC-ACTATTCCAAACCCCATATATAATATCCGACGCATGC 659
consensus_637#1      TCTAGAGATCTAGAGAAAATGTTACTTATTGCAACTTAAGATATAAAGTTTAA---ATAT 161
                     ** *****  * ** * * **  ***  *   ***   * ******  *   *   **  

consensus_637#0      ATCAACCTAGAAC--GCACTGACTCAGTCAACTAGTTCGCAAAACGCAACAAAAGAAATA 717
consensus_637#1      CTCATTCAATATTTAGTATAAATTTCNNNTTTTTATTTACAGTGTGCTTGCATAATTACA 221
                      ***  * * *    * *   * *        *  **  **    **    * *   * *

consensus_637#0      AAGGAAAGAGGAAGATTGTTGGGAGAGAAAGAACGAGTGAAAAGAACGAGAGCACAAGAT 777
consensus_637#1      ACTTCTTTTTAATTTTTCTTAGGCTATAATATATTATGAAACAATGCAAAATCATGT-AT 280
                     *          *   ** ** **  * **   *  *   ** *   * * * **    **

consensus_637#0      GAAGCAACAAGCGTCGGAAGAATTCCCTTTATGGATAAAGTTACTTTCCGCAGGCACAGC 837
consensus_637#1      TTCATATTAATTTTTAAAA----TTCATGTTTGATTATACGTATTAATCAT---CTTGAT 333
                          *  **   *   **    * * * * **  ** *  ** *   *     *     

consensus_637#0      AGCCTGTATCGCTGATTTAGCGACGTTTCCTTTGGACACCGCCAAAGTCAGAATGCA-GA 896
consensus_637#1      ATCCTTTCTTAGAAAATTTCCATTGTTTC--TTACACACGATTAATATTATCATAAATAA 391
                     * *** * *     * **  *   *****  **  ****    **  * *  **  *  *

consensus_637#0      TTGCCGGAGAAAGTCGTCCTCTTCTATTGGCGACTACGGATGGCTC-CATGCTCGCGATG 955
consensus_637#1      TTGTATCGCGTAATCAATAAAGTCAATTCTTTTTCATACTTGATTTACTCGATTTCCATT 451
                     ***        * **       ** ***       *    **  *  *  * *  * ** 

consensus_637#0      CGAAATACGCAACCAGGATTATGGAGGACAGTAAAGAACATCGTCAGACTCGAAGGAGCA 1015
consensus_637#1      TGAATT-CGTTACATCTTTTCAGGATTCAGAGTGGGGATTCAAGGATGTTTGTACAAATA 510
                      *** * **  **     **  ***          * *       *   * * *  *  *

consensus_637#0      AGGTACGTTATTCATGATCCTATAGTAAATTTAAGAACAAGGGGTAGGTAAAAACCGATT 1075
consensus_637#1      TTCTACATGCTTTTTTCCTCTACATAATATTTATACATTGTAATTGGGAAAGAGATGCTT 570
                        *** *  **  *    *** *  * *****   *       * ** ** *   * **

consensus_637#0      ACATTATTGTACATAAATATAATTAGCGTATACATATATATACATATTTCTTCCGATTCG 1135
consensus_637#1      C--TTATTACTTA-AAATGTTATACTCGCGCA-AAATATAA------------------- 607
                        *****    * **** * **   **   * * *****                    

consensus_637#0      AATCAAAGTTTATATACACAGCGGGCACTTTTTCGTGCCCGCTCGAAATATGATAATTAT 1195
consensus_637#1      ------------------------------------------------------------
                                                                                 

consensus_637#0      TTGATTACGTAATTCACTTCAACTTGAA 1223
consensus_637#1      ----------------------------
                                                 




Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)