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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_666#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 563 fasta sequence
[TGTCGGCTCGGCCGATGAGTTTCGTTGATCGTCTCTCTCATTCTCTCGGCCGTCATCACTGTCGCCGCCTTTTTCTTGGCATCGCCTTCAGGAGAACCCGTGGCAATTCTCACGGATCTCGAAGTAGAGATTCAGCAGTGCCGATTCCGGCACGTCGTGGAAGCACCTACCCTCTGGCCATTGTACGCATACGTTGGGTACCGTCGGTGGTTTTTTCGTCTGCACCCTCGCTGTCGCATTGTTCACCTCAATCTTTCTGCCCTCAACCACGGTGCCGTGTAGCCTCTCACGTGCCCGGTCCGCGTCAGCACTATTTGCGAATGTTACAAAACCGAATCCCTTGCTTCCTCTTTCGTTAAATATGATTTCCACGTCGAGGATCGGCCCGAATTGCCCAAACATTGCCCTGAGATCAGGGTCTCGGAAGCGGAAAGGTATATTGCTGACGTGAAGGCGTTTCGGTTGACCTTTCAGGTCTGTACCCTGTGTTGCGGTGGCAGGTGTGGTTGCACCTGAAGTGACAGGTACCAGGGCGCTGCCCTCGACGGCGCCCTCGGGGTTGC]
[+] EMBL BI506415 [TGTCGGCTCGGCCGATGAGTTTCGTTGATCGTCTCTCTCATTCTCTCGGCCGTCATCACTGTCGCCGCCTTTTTCTTGGCATCGCCTTCAGGAGAACCCGTGGCAATTCTCACGGATCTCGAAGTAGAGATTCAGCAGTGCCGATTCCGGCACGTCGTGGAAGCACCTACCCTCTGGCCATTGTACGCATACGTTGGGTACCGTCGGTGGTTTTTTCGTCTGCACCCTCGCTGTCGCATTGTTCACCTCAATCTTTCTGCCCTCAACCACGGTGCCGTGTAGCCTCTCACGTGCCCGGTCCGCGTCAGCACTATTTGCGAATGTTACAAAACTGAATCCCTTGCTTCCTCTTTCGTTAAATATGATTTCCACGTCGAGGATCGGCCCGAATTGCCCAAACATTGCCCTGAGATCAGGGTCTCGGAAGCGGAAAGGTATATTGCTGACGTGAAGGCGTTTCGGTTGACCTTTCAGGTCTGTACCCTGTGTTGCGGTGGCAGGTGTGGTTGCACCTGAAGTGACAGGTACCAGGGCGCTGCCCTCGACGGCGCCCTCGGGGTTGC]
[+] EMBL BI514758 [TGTCGGCTCGGCCGATGAGTTTCGTTGATCGTCTCTCTCATTCTCTCGGCCGTCATCACTGTCGCCGCCTTTTTCTTGGCATCGCCTTCAGGAGAACCCGTGGCAATTCTCACGGATCTCGAAGTAGAGATTCAGCAGTGCCGATTCCGGCACGTCGTGGAAGCACCTACCCTCTGGCCATTGTACGCATACGTTGGGTACCGTCGGTGGTTTTTTCGTCTGCACCCTCGCTGTCGCATTGTTCACCTCAATCTTTCTGCCCTCAACCACGGTGCCGTGTAGCCTCTCACGTGCCCGGTCCGCGTCAGCACTATTTGCGAATGTTACAAAACCGAATCCCTTGCTTCCTCTTTCGTTAAATATGATTTCCACGTCGAGGATCGGCCCGAATTGCCCAAACATTGCCCTGAGATCAGG ]
consensusID : consensus_666#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 413 fasta sequence
[GGTATATAGGTATCTCGTTTTACTAGCCTTCCACACATATATATATATTTTTCTATTTCTCGCTCGTTCTCTACACCGTACTATCCGATCTCTACTACGTGTTTCCCGCACGCGCCTCGACTCTCGTCTGTCGCTGTGTCGCGCGTAGAACGACTCTCTTGCTTCCTCTTTCGTTAAATATGATTTCCACGTCGAGGATCGGCCCGAATTGCCCAAACATTGCCCTGAGATCAGGGTCTCGGAAGCGGAAAGGTATATTGCTGACGTGAAGGCGTTTCGGTTGACCTTTCAGGTCTGTACCCTGTGTTGCGGTGGCAGGTGTGGTTGCACCTGAAGTGACAGGTACCAGGGCGCTGCCCTCGACGGCGCCCTCGGGGTTGCTCTCGTTGCCGGCGGGTGTGGGGGCGGGTTGC]
[+] EMBL BI508592 [GGTATATAGGTATCTCGTTTTACTAGCCTTCCACACATATATATATATTTTTCTATTTCTCGCTCGTTCTCTACACCGTACTATCCGATCTCTACTACGTGTTTCCCGCACGCGCCTCGACTCTCGTCTGTCGCTGTGTCGCGCGTAGAACGACTCTCTTGCTTCCTCTTTCGTTAAATATGATTTCCACGTCGAGGATCGGCCCGAATTGCCCAAACATTGCCCTGAGATCAGGGTCTCGGAAGCGGAAAGGTATATTGCTGACGTGAAGGCGTTTCGGTTGACCTTTCAGGTCTGTACCCTGTGTTGCGGTGGCAGGTGTGGTTGCACCTGAAGTGACAGGTACCAGGGCGCTGCCCTCGACGGCGCCCTCGGGGTTGCTCTCGTTGCCGGCGGGTGTGGGGGCGGGTTGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_666#0 TGTCGGCTCGGCCGATGAGTTTCGTTGATCGTCTCTCTCATTCTCTCGGCCGTCATCACT 60
consensus_666#1 ------------------------------------------------------------
consensus_666#0 GTCGCCGCCTTTTTCTTGGCATCGCCTTCAGGAGAACCCGTGGCAATTCTCACGGATCTC 120
consensus_666#1 ------------------------------------------------------------
consensus_666#0 GAAGTAGAGATTCAGCAGTGCCGATTCCGGCACGTCGTGGAAGCACCTACCCT--CTGGC 178
consensus_666#1 ---------------------------------GGTATATAGGTATCTCGTTTTACTAGC 27
* * * * * ** * ** **
consensus_666#0 CATTGTACGCATACGTTGGGTACCGTCGGTGGTTTTTTCGTCTGCACCCTCGCTGTCGCA 238
consensus_666#1 C-TTCCACACATATAT---ATAT--------ATTTTTCTATTT-----CTCGCT----CG 66
* ** ** **** * ** ***** * * ****** *
consensus_666#0 TTGTTCACCTCAATCTTTCTGCCCTCAACCACGGTGCCGTGTAGCCTCTCACGTGCC-CG 297
consensus_666#1 TTCTCTACACCGTACTATCCGATCTCTACTACG------TGTT-TCCCGCACGCGCCTCG 119
** * ** * ** ** * *** ** *** *** * * **** *** **
consensus_666#0 GTCCGCGTCAG-CACTATTTGCGAATGTTACAAAACCGAATCCCTTGCTTCCTCTTTCGT 356
consensus_666#1 ACTCTCGTCTGTCGCTGTGT-CGCGCGT----AGAACGACTCTCTTGCTTCCTCTTTCGT 174
* **** * * ** * * ** ** * * *** ** *****************
consensus_666#0 TAAATATGATTTCCACGTCGAGGATCGGCCCGAATTGCCCAAACATTGCCCTGAGATCAG 416
consensus_666#1 TAAATATGATTTCCACGTCGAGGATCGGCCCGAATTGCCCAAACATTGCCCTGAGATCAG 234
************************************************************
consensus_666#0 GGTCTCGGAAGCGGAAAGGTATATTGCTGACGTGAAGGCGTTTCGGTTGACCTTTCAGGT 476
consensus_666#1 GGTCTCGGAAGCGGAAAGGTATATTGCTGACGTGAAGGCGTTTCGGTTGACCTTTCAGGT 294
************************************************************
consensus_666#0 CTGTACCCTGTGTTGCGGTGGCAGGTGTGGTTGCACCTGAAGTGACAGGTACCAGGGCGC 536
consensus_666#1 CTGTACCCTGTGTTGCGGTGGCAGGTGTGGTTGCACCTGAAGTGACAGGTACCAGGGCGC 354
************************************************************
consensus_666#0 TGCCCTCGACGGCGCCCTCGGGGTTGC-------------------------------- 563
consensus_666#1 TGCCCTCGACGGCGCCCTCGGGGTTGCTCTCGTTGCCGGCGGGTGTGGGGGCGGGTTGC 413
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |