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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_719#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 677 fasta sequence
[GAGATCGACTGTCGGATCATAATCAACTCGCAAAATGAGACGTTCCGTTGCACGGAACTGACGAATTTAAATGCGTTGAACAAAGCGGGAACCAATACCACGAGTATAGAGATTTCGGATTCGAGAATATCTAATGTTCCAGGGCACAGTTTCGCAAGATTCGGCGCGACTCTCGTAACTTTGGATCTGCACGGATCAGGTATAGAGACTATAGATCCTTTGGCGTTTATAGGCCTCACGAAACTAGAGAATTTACTGTTGTGGGACAACAAATTGAGAGTCGTGCCTGGTAATTGGTTCGCGAACATGTACAATTTAAAAACCTTGGATCTGTCGTTCAATCGTATCACTGTAATCGATTACATCGTATTCACGCTGCTTCCCAATTTGGAAAATTTCTATTTTGATTACAATCAAATAAAAATCATCGATTACAATATGTTCCAGCAACTCAGAAACCTTAAAAATGTGAAGTTCGAGAAGAATCCGTTGGATTGGGGAGTTCGTGCTCAGTTAATATGGCAATTGGAAAATCAGCACGTAAAATATGACGAAGATTGGGAAAATTGGGAATGGATGAACAAAATGATCAAAGAGTGCTCGGAAAATGTCTATGAAGAAATACCGAAAGATAAGATTCTCGATTGCATCGTTGAAAAGTTACTGAATTACACGTA]
[+] EMBL BI514306 [GAGATCGACTGTCGGATCATAATCAACTCGCAAAATGAGACGTTCCGTTGCACGGAACTGACGAATTTAAATGCGTTGAACAAAGCGGGAACCAATACCACGAGTATAGAGATTTCGGATTCGAGAATATCTAATGTTCCAGGGCACAGTTTCGCAAGATTCGGCGCGACTCTCGTAACTTTGGATCTGCACGGATCAGGTATAGAGACTATAGATCTTTTGGCGTTTATAGGCCTCACAAAACTCGAGAATTTACTGTTGTGGGACAACAAATTGAGAGTCGTGCCTGGTAATTGGTTCGTGAATATGTACAATTTAAAAACCTTGGATCTGTCGTTCAATCGTATCACTGTAATCGATTACATCATATTCACGCTCCTTCCCAATTTGGAAAATTTCTATTTTGATTACAATCAAATAAAAATCATCGATTACAATATGTTCCAGCAACTCAGAAACCTTAA ]
[+] EMBL BI511703 [ CAAGATTCGGCGCGACTCTCGTAACTTTGGATCTGCACAGATCAGGTATAGAGACTATAGATCCTTTGGCGTTTATAGGCCTCACGAAACTAGAGAATTTACTGTTGTGGGACAACAAATTGAGAGTCGTGCCTGGTAATTGGTTCGCGAACATGTACAATTTAAAAACCTTGGATCTGTCGTTCAATCGTATCACTGTAATCGATTACATCGTATTCACGTTGCTTCCCAATTTGGAAAATTTCTATTTTGATTACAATCAAATAAAAATCATCGATTACAATATGTTCCAGCAATTCAGAAACCTTAAAAATGTGAAGTTCGAGAAGAATCCGTTGGATTGGGGAGTTCGTGCTCAGTTAATATGGCAATTGGAAAATCAGCACGTAAAATATGACGAAGATTGGGAAAATTGGGAATGGATGAACAAAATGATCAAAGAGTGCTCGGAAAATGTCTATGAAGAAATACCGAAAGATAAGATTCTCGATTGCATCGTTGAAAAGTTACTGAATTACACGTA]
consensusID : consensus_719#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 552 fasta sequence
[GATCATAATCAACTCGCAAAATGAAACGTTCCGTTGCACGGAACTGACGAATTTAAATGCGTTGAACAAAGCGGGAACCAATACCACGAGTATAGAGATTTCGGATTCGAGAATATCTAATGTTCCAGGCAACTCAGAAACCTTAAAAATGTGAAGTTCGAGAAGAATCCGTTGGATTGGGGATTTCGTGCTCAGTTAATATGGCAATTGGAAAATCAGCACGTAAAATATGACGAAGATTGGGAAAATTGGGAATGGATGAACAAAATGATCAAAGAGTGCTCGGAAAATGTCTATGAAGGAATACCGAAAGATAAGATTCTCGATTGCATCGTTGAAAAGTTACTGAATTACACGTACGAAATATTTTCTACGGAAATGATACAACAAAATGTCGACTGTCTCGTGAAAGCTCGACAGTTGGTACGCTGTATGAGACCTAAAAATGTCACGGGAAATACGGATAACGAGACTGCGAGAAGTATACTCGAAGATTACGCGACGATTCTACCGGTAATGTCTAGATCAAACGCTCGATTTTCAGCATCAACA]
[+] EMBL BI516928 [GATCATAATCAACTCGCAAAATGAAACGTTCCGTTGCACGGAACTGACGAATTTAAATGCGTTGAACAAAGCGGGAACCAATACCACGAGTATAGAGATTTCGGATTCGAGAATATCTAATGTTCCAGGCAACTCAGAAACCTTAAAAATGTGAAGTTCGAGAAGAATCCGTTGGATTGGGGATTTCGTGCTCAGTTAATATGGCAATTGGAAAATCAGCACGTAAAATATGACGAAGATTGGGAAAATTGGGAATGGATGAACAAAATGATCAAAGAGTGCTCGGAAAATGTCTATGAAGGAATACCGAAAGATAAGATTCTCGATTGCATCGTTGAAAAGTTACTGAATTACACGTACGAAATATTTTCTACGGAAATGATACAACAAAATGTCGACTGTCTCGTGAAAGCTCGACAGTTGGTACGCTGTATGAGACCTAAAAATGTCACGGGAAATACGGATAACGAGACTGCGAGAAGTATACTCGAAGATTACGCGACGATTCTACCGGTAATGTCTAGATCAAACGCTCGATTTTCAGCATCAACA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_719#0 GAGATCGACTGTCGGATCATAATCAACTCGCAAAATGAGACGTTCCGTTGCACGGAACTG 60
consensus_719#1 --------------GATCATAATCAACTCGCAAAATGAAACGTTCCGTTGCACGGAACTG 46
************************ *********************
consensus_719#0 ACGAATTTAAATGCGTTGAACAAAGCGGGAACCAATACCACGAGTATAGAGATTTCGGAT 120
consensus_719#1 ACGAATTTAAATGCGTTGAACAAAGCGGGAACCAATACCACGAGTATAGAGATTTCGGAT 106
************************************************************
consensus_719#0 TCGAGAATATCTAATGTTCCAGGGCAC-----AGTTTC------GCAAGATTCGGCGCGA 169
consensus_719#1 TCGAGAATATCTAATGTTCCAGGCAACTCAGAAACCTTAAAAATGTGAAGTTCGAGAAGA 166
*********************** ** * * * * **** **
consensus_719#0 CTCTCGTAACTTTGGATCTGCACGGATCAGGTATAGAGACTATAGATCCTTTGGCGTTTA 229
consensus_719#1 ATCCGTTGGATTGGGGATTTCGTGC-TCAGTTAATATGGCAATTGGAAAATCAGCACGTA 225
** * ** ** * * * **** ** * * ** * * ** **
consensus_719#0 TAGGCCTCACGAAACTAGAGAATTTACTGTTGTGGGACAACAAATTGA--GAGTCGTGCC 287
consensus_719#1 -AAATATGACGAAGATTGGGAAAAT-TGGGAATGGATGAACAAAATGATCAAAGAGTGCT 283
* * ***** * * *** * * *** ****** *** * ****
consensus_719#0 TGGTAATTGGTTCGCGAACATGTAC---AATTTAAAAACCTTGGATCTGTCGTTCAATCG 344
consensus_719#1 CGGAAAATG-TCTATGAAGGAATACCGAAAGATAAGATTCTCGATTGCATCGTTGAAAAG 342
** ** ** * *** *** ** *** * ** * * ***** ** *
consensus_719#0 TATCACTGTAATCGATTACATCGTATTCA-CGCTGCTTCCCAATTTGGAAAATTTCTATT 403
consensus_719#1 T-------TACTGAATTACA-CGTACGAAATATTTTCTACGGAAATGATACAACAAAATG 394
* ** * ****** **** * * * * * ** * * **
consensus_719#0 TTGATTACAATCAAATAAAAATCATCGATTACAATATGTTCCAGCAACTCAGAAACCTTA 463
consensus_719#1 TCGACTG---TCTCGTGAAAGC--TCGA---CAGTTGGT----ACGCTGTATGAGACCTA 442
* ** * ** * *** **** ** * ** * * * * **
consensus_719#0 AAAATGTGAAGTTCGAGAAGAATCCGTTGGATTGGGGAGTTCGTGCTC--AGTTAATATG 521
consensus_719#1 AAAATGTCACGGGAAATACGGATA-ACGAGACTGCGAGAAGTATACTCGAAGATTACGCG 501
******* * * * * * ** ** ** * * *** ** * * *
consensus_719#0 GCAATTGGAAAATCAGCACGTAAAATATGACGAAGATTGGGAAAATTGGGAATGGATGAA 581
consensus_719#1 ACGATTCTACCGGTAATGTCTAGATCAAACGCTCGATTTTCAGCATCAACA--------- 552
* *** * * ** * * **** * ** *
consensus_719#0 CAAAATGATCAAAGAGTGCTCGGAAAATGTCTATGAAGAAATACCGAAAGATAAGATTCT 641
consensus_719#1 ------------------------------------------------------------
consensus_719#0 CGATTGCATCGTTGAAAAGTTACTGAATTACACGTA 677
consensus_719#1 ------------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |