These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_743#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 583 fasta sequence [CACAAATGAAATATCGTATTCTTATAACATTGCAACATGCGAGCAAAATGATAAAAAGAGTGCTTGGTCGCCAATATGGCGGGGTTTCGACCGCAATTAATTCATTCCCAATTCTCCGTTACATTGAAACGAACAATCGAATTCGATTAAGTGAAAATTAAATTTCCTAACGGAGGTCCACACTCGTTACGTTATCCTCGTTTCATACCGCCGTTTAAATATCCATCCAACGATTTTACTACGCTTTAGAATTTTCAATAACGAGTGTGCACCCTCATCTTAATCCTTAACTGCCATTGCAAGATCATCAAAGGACGTAATAAAAAACATAATTTTTTTTTTTTCTTTCAATGGCATTAAGCATTTTAATTATCTTTATTTTGATCAAAAATTCCAGAAATATAGCAAAAATATTCTATTATATATTTCGATTTCACCATAACAGTTAAGGATTGAGAGAAAGAGAGAGAGAGAAAGAGAGAGAAAAGATTATCAAAGAAACAGGGAGGATAATAAAATAGTAAGAAAGCACGGTCTGGATGAAACAAGCATCGCACATTTATTCGAGAAGCATGGAAAAGAA] [+] EMBL BI504403 [CACAAATGAAATATCGTATTCTTATAACATTGCAACATGCGAGCAAAATGATAAAAAGAGTGCTTGGTCGCCAATATGGCGGGGTTTCGACCGCAATTAATTCATTCCCAATTCTCCGTTACATTGAAACGAACAATCGAATTCGATTAAGTGAAAATTAAATTTCCTAACGGAGGTCCACACTCGTTACGTTATCCTCGTTTCATACCGCCGTTTAAATATCCATCCAACGATTTTACTACGCTTTAGAATTTTCAATAACGAGTGTGCACCCTCATCTTAATCCTTAACTGCCATTGCAAGATCATCAAAGGACGTAATAAAAAACATAATTTTTTTTTTTTCTTTCAATGGCATTAAGCATTTTAATTATCTTTATTTTGATCAAAAATTCCAGAAATATAGCAAAAATATTCTATTATATATTTCGATTTCACCATAACAGTTAAGGATTGAGAGAAAGAGAGAGAGAGAAAGAGAGAGAAAAGATTATCAAAGAAACAGGGAGGATAATAAAATAGTAAGAAAGCACGGTCTGGATGAAACAAGCATCGCACATTTATTCGAGAAGCATGGAAAAGAA] [+] EMBL BI504577 [CACAAATGAAATATCGTATTCTTATAACATTGCAACATGCGAGCAAAATGATAAAAAGAGTGCTTGGTCGCCAATATGGCGGGGTTTCGACCGCAATTAATTCATTCCCAATTCTCCGTTACATTGAAACGAACAATCGAATTCGATTAAGTGAAAATTAAATTTCCTAACGGAGGTCCACACTCGTTACGTTATCCTCGTTTCATACCGCCGTTTAAATATCCATCCAACGATTTTACTACGCTTTAGAATTTTCAATAACGAGTGTGCACCCTCATCTTAATCCTTAACTGCCATTGCAAGATCATCAAAGGACGTAATAAAAAACATAATTTTTTTTTTTTCTTTCAATGGCATTAAGCATTTTAATTATCTTTATTTTGATCAAAAATTCCAGAAATATAGCAAAAATATTCTATTATATATTTCGATTTCACCATAACAGTTAAGGATTGAGAGAAAGAGAGAGAGAGAAAGAGAGAGAAAAGATTATCAAAGAAACAGGGAGGATAATAAAATAGTAAGAAAGCACGGTCTGGATGAAACAAGCATCGCACATTTATT ] consensusID : consensus_743#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 218 fasta sequence [TTTTTTTTCTTTCAATGGCATTAAGCATTTTAATTATCTTTATTTTGATCAAAAATTCCAGAAATATAGCAAAAATATTCTATTATATATTTCGATTTCACCATAACAGTTAAGGATGGAGAGAATGCGCGCGAGTGAAAGGGACAGAGAGGGTGGCGGAGAAACGATGGAGAAGGGGAGGTCAGTTCTCTTCATCGGATTTAATGTAAAGCTCGGCC] [-] EMBL BI504511 [TTTTTTTTCTTTCAATGGCATTAAGCATTTTAATTATCTTTATTTTGATCAAAAATTCCAGAAATATAGCAAAAATATTCTATTATATATTTCGATTTCACCATAACAGTTAAGGATGGAGAGAATGCGCGCGAGTGAAAGGGACAGAGAGGGTGGCGGAGAAACGATGGAGAAGGGGAGGTCAGTTCTCTTCATCGGATTTAATGTAAAGCTCGGCC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_743#0 CACAAATGAAATATCGTATTCTTATAACATTGCAACATGCGAGCAAAATGATAAAAAGAG 60 consensus_743#1 ------------------------------------------------------------ consensus_743#0 TGCTTGGTCGCCAATATGGCGGGGTTTCGACCGCAATTAATTCATTCCCAATTCTCCGTT 120 consensus_743#1 ------------------------------------------------------------ consensus_743#0 ACATTGAAACGAACAATCGAATTCGATTAAGTGAAAATTAAATTTCCTAACGGAGGTCCA 180 consensus_743#1 ------------------------------------------------------------ consensus_743#0 CACTCGTTACGTTATCCTCGTTTCATACCGCCGTTTAAATATCCATCCAACGATTTTACT 240 consensus_743#1 ------------------------------------------------------------ consensus_743#0 ACGCTTTAGAATTTTCAATAACGAGTGTGCACCCTCATCTTAATCCTTAACTGCCATTGC 300 consensus_743#1 ------------------------------------------------------------ consensus_743#0 AAGATCATCAAAGGACGTAATAAAAAACATAATTTTTTTTTTTTCTTTCAATGGCATTAA 360 consensus_743#1 ------------------------------------TTTTTTTTCTTTCAATGGCATTAA 24 ************************ consensus_743#0 GCATTTTAATTATCTTTATTTTGATCAAAAATTCCAGAAATATAGCAAAAATATTCTATT 420 consensus_743#1 GCATTTTAATTATCTTTATTTTGATCAAAAATTCCAGAAATATAGCAAAAATATTCTATT 84 ************************************************************ consensus_743#0 ATATATTTCGATTTCACCATAACAGTTAAGGATTGAGAGAAAGAGAGAGAGAGAAAGAGA 480 consensus_743#1 ATATATTTCGATTTCACCATAACAGTTAAGGATGGAGAGAATGCGCGCGAGTGAAAGGGA 144 ********************************* ******* * * * *** ***** ** consensus_743#0 GAGAAAAGATTATCAAAGAAACAGGGAGGATAATAAAATAGTAAGAAAGCACGGTCTGGA 540 consensus_743#1 CAGAGAGGGTGGCGGAGAAACGATGGAGAAGGGGAGGTCAGTTCTCTTCATCGGATTTAA 204 *** * * * * ** * **** * * *** *** * * consensus_743#0 TGAAACAAGCATCGCACATTTATTCGAGAAGCATGGAAAAGAA 583 consensus_743#1 TGTA--AAGCTCGGCC--------------------------- 218 ** * **** ** |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |