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Apis mellifera
cluster # 762 cluster # 762       Sequences # 3       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_762#0 length = 668 sequences # 2  
consensus_762#1 length = 498 sequences # 1  

consensusID : consensus_762#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 668
fasta sequence
                              [AATGATTATTATATTTTAAACGGTCATAAATTTTGGATTACAAATGGTCCTGATGCTGATACTATTATCGTTTATGCAAAAACAGATCCAAATGCGATTAAACAGCAACATGGTATTACAGCATTTATCGTAGAACGAGATTTCGAAGGTTTTAGTATAGCTCAAAAATTAGATAAATTAGGTATGCGAGGTTCTAATACTGGTGAACTTGTATTTCAAGATTGTAAAGTTCCAGTTAAAAATGTACTTGGACAAGTGAACAAAGGTATTTACGTGTTATTTAGTGGCTTAGACTTGGAACGTGTAACGTTAGCAGCAGGCCCTTTAGGAATCATTCAGGCTTGTTGCGACGTGGCATTTGAATATGCACATATGAGAAAGCAATTTGAAAAACGTATAGCAGAATTTCAAATGATACAGGAGAAAATTGCAAATATGTATACGAGTTTAAGCGCTTGTAGAAGTTATTTGTATTCTGTAGTTAGATCTTGTGATGCAGGATATATAAATCGAAAAGATTGTGCCGCGGTGATACTTTACATTGCTGAATGCGCTACCAAAGCTGCGTTGGACGCAATTCAAATACTAGGTGGAAATGGCTATATAAATGATTATCCTACTGGAAGATTATTGAGGGATGCAAAATTATACGAAATTGGTGCTGGTAC]

[+] EMBL BI507773             [AATGATTATTATATTTTAAACGGTCATAAATTTTGGATTACAAATGGTCCTGATGCTGATACTATTATCGTTTATGCAAAAACAGATCCAAATGCGATTAAACAGCAACATGGTATTACAGCATTTATCGTAGAACGAGATTTCGAAGGTTTTAGTATAGCTCAAAAATTAGATAAATTAGGTATGCGAGGTTCTAATACTGGTGAACTTGTATTTCAAGATTGTAAAGTTCCAGTTAAAAATGTACTTGGACAAGTGAACAAAGGTATTTACGTGTTATTTAGTGGCTTAGACTTGGAACGTGTAACGTTAGCAGCAGGCCCTTTAGGAATCATTCAGGCTTGTTGCGACGTGGCATTTGAATATGCACATATGAGAAAGCAATTTGAAAAACGTATAGCAGAATTTCAAATGATACAGGAGAAAATTGCAAATATGTATACGAGTTTAAGCGCTTGTAGAAGTTATTTGTATTCTGTAGTTAGATCTTGTGATGCAGGATATATAAATCGAAAAGATTGTGCCGCGGTGATACTTTACATTGCTGAATGCGCTACCAAAGCTGCGTTGGACGCAATTCAAATACTAGGTGGAAATGGCTATATAAAT                                                           ]
[+] EMBL BI504250             [                                                                TTATCGTTTATGCAAAAACAGATCCAAATGCGATTAAACAGCAACATGGTATTACAGCATTTATCGTAGAACGAGATTTCGAAGGTTTTAGTATAGCTCAAAAATTAGATAAATTAGGTATGCGAGGTTCTAATACTGGTGAACTTGTATTTCAAGATTGTAAAGTTCCAGTTAAAAATGTACTTGGACAAGTGAACAAAGGTATTTACGTGTTATTTAGTGGCTTAGACTTGGAACGTGTAACGTTAGCAGCAGGCCCTTTAGGAATCATTCAGGCTTGTTGCGACGTGGCATTTGAATATGCACATATGAGAAAGCAATTTGAAAAACGTATAGCAGAATTTCAAATGATACAGGAGAAAATTGCAAATATGTATACGAGTTTAAGCGCTTGTAGAAGTTATTTGTATTCTGTAGTTAGATCTTGTGATGCAGGATATATAAATCGAAAAGATTGTGCCGCGGTGATACTTTACATTGCTGAATGCGCTACCAAAGCTGCGTTAGACGCAATTCAAATACTAGGTGGAAATGGCTATATAAATGATTATCCTACTGGAAGATTATTGAGGGATGCAAAATTATACGAAATTGGTGCTGGTAC]


>consensus_762#0 AATGATTATTATATTTTAAACGGTCATAAATTTTGGATTACAAATGGTCCTGATGCTGAT ACTATTATCGTTTATGCAAAAACAGATCCAAATGCGATTAAACAGCAACATGGTATTACA GCATTTATCGTAGAACGAGATTTCGAAGGTTTTAGTATAGCTCAAAAATTAGATAAATTA GGTATGCGAGGTTCTAATACTGGTGAACTTGTATTTCAAGATTGTAAAGTTCCAGTTAAA AATGTACTTGGACAAGTGAACAAAGGTATTTACGTGTTATTTAGTGGCTTAGACTTGGAA CGTGTAACGTTAGCAGCAGGCCCTTTAGGAATCATTCAGGCTTGTTGCGACGTGGCATTT GAATATGCACATATGAGAAAGCAATTTGAAAAACGTATAGCAGAATTTCAAATGATACAG GAGAAAATTGCAAATATGTATACGAGTTTAAGCGCTTGTAGAAGTTATTTGTATTCTGTA GTTAGATCTTGTGATGCAGGATATATAAATCGAAAAGATTGTGCCGCGGTGATACTTTAC ATTGCTGAATGCGCTACCAAAGCTGCGTTGGACGCAATTCAAATACTAGGTGGAAATGGC TATATAAATGATTATCCTACTGGAAGATTATTGAGGGATGCAAAATTATACGAAATTGGT GCTGGTAC



consensusID : consensus_762#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 498
fasta sequence
                              [AATGATTATTATATTTTAAACGGTCATAAATTTTGGATTACAAATGGTCCTGATGCTGATACTATTATCGTTTATGCAAAAACAGATCCAAATGCGATTAAACAGCAACATGATTGTAAAGTTCCAGTTAAAAATGTACTTGGACAAGTGAACAAAGGTATTTACGTGTTATTTAGTGGCTTAGACTTGGAACGTGTAACGTTAGCAGCAGGCCCTTTAGGAATCATTCAGGCTTGTTGCGACGTGGCATTTGAATATGCACATATGAGAAAGCAATTTGAAAAACGTATAGCAGAATTTCAAATGATACAGGAGAAAATTGCAAATATGTATACGAGTTTAAGCGCTTGTAGAAGTTATTTGTATTCTGTAGTTAGATCTTGTGATGCAGGATATATAAATCGAAAAGATTGTGCCGCGGTGATACTTTACATTGCTGAATGCGCTACCAAAGCTGCGTTGGACGCAATTCAAATACTAGGTGGAAATGGCTATATA]

[+] EMBL BI516894             [AATGATTATTATATTTTAAACGGTCATAAATTTTGGATTACAAATGGTCCTGATGCTGATACTATTATCGTTTATGCAAAAACAGATCCAAATGCGATTAAACAGCAACATGATTGTAAAGTTCCAGTTAAAAATGTACTTGGACAAGTGAACAAAGGTATTTACGTGTTATTTAGTGGCTTAGACTTGGAACGTGTAACGTTAGCAGCAGGCCCTTTAGGAATCATTCAGGCTTGTTGCGACGTGGCATTTGAATATGCACATATGAGAAAGCAATTTGAAAAACGTATAGCAGAATTTCAAATGATACAGGAGAAAATTGCAAATATGTATACGAGTTTAAGCGCTTGTAGAAGTTATTTGTATTCTGTAGTTAGATCTTGTGATGCAGGATATATAAATCGAAAAGATTGTGCCGCGGTGATACTTTACATTGCTGAATGCGCTACCAAAGCTGCGTTGGACGCAATTCAAATACTAGGTGGAAATGGCTATATA]


>consensus_762#1 AATGATTATTATATTTTAAACGGTCATAAATTTTGGATTACAAATGGTCCTGATGCTGAT ACTATTATCGTTTATGCAAAAACAGATCCAAATGCGATTAAACAGCAACATGATTGTAAA GTTCCAGTTAAAAATGTACTTGGACAAGTGAACAAAGGTATTTACGTGTTATTTAGTGGC TTAGACTTGGAACGTGTAACGTTAGCAGCAGGCCCTTTAGGAATCATTCAGGCTTGTTGC GACGTGGCATTTGAATATGCACATATGAGAAAGCAATTTGAAAAACGTATAGCAGAATTT CAAATGATACAGGAGAAAATTGCAAATATGTATACGAGTTTAAGCGCTTGTAGAAGTTAT TTGTATTCTGTAGTTAGATCTTGTGATGCAGGATATATAAATCGAAAAGATTGTGCCGCG GTGATACTTTACATTGCTGAATGCGCTACCAAAGCTGCGTTGGACGCAATTCAAATACTA GGTGGAAATGGCTATATA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_762#0      AATGATTATTATATTTTAAACGGTCATAAATTTTGGATTACAAATGGTCCTGATGCTGAT 60
consensus_762#1      AATGATTATTATATTTTAAACGGTCATAAATTTTGGATTACAAATGGTCCTGATGCTGAT 60
                     ************************************************************

consensus_762#0      ACTATTATCGTTTATGCAAAAACAGATCCAAATGCGATTAAACAGCAACATGGTATTACA 120
consensus_762#1      ACTATTATCGTTTATGCAAAAACAGATCCAAATGCGATTAAACAGCAACATG-------- 112
                     ****************************************************        

consensus_762#0      GCATTTATCGTAGAACGAGATTTCGAAGGTTTTAGTATAGCTCAAAAATTAGATAAATTA 180
consensus_762#1      ------------------------------------------------------------
                                                                                 

consensus_762#0      GGTATGCGAGGTTCTAATACTGGTGAACTTGTATTTCAAGATTGTAAAGTTCCAGTTAAA 240
consensus_762#1      ----------------------------------------ATTGTAAAGTTCCAGTTAAA 132
                                                             ********************

consensus_762#0      AATGTACTTGGACAAGTGAACAAAGGTATTTACGTGTTATTTAGTGGCTTAGACTTGGAA 300
consensus_762#1      AATGTACTTGGACAAGTGAACAAAGGTATTTACGTGTTATTTAGTGGCTTAGACTTGGAA 192
                     ************************************************************

consensus_762#0      CGTGTAACGTTAGCAGCAGGCCCTTTAGGAATCATTCAGGCTTGTTGCGACGTGGCATTT 360
consensus_762#1      CGTGTAACGTTAGCAGCAGGCCCTTTAGGAATCATTCAGGCTTGTTGCGACGTGGCATTT 252
                     ************************************************************

consensus_762#0      GAATATGCACATATGAGAAAGCAATTTGAAAAACGTATAGCAGAATTTCAAATGATACAG 420
consensus_762#1      GAATATGCACATATGAGAAAGCAATTTGAAAAACGTATAGCAGAATTTCAAATGATACAG 312
                     ************************************************************

consensus_762#0      GAGAAAATTGCAAATATGTATACGAGTTTAAGCGCTTGTAGAAGTTATTTGTATTCTGTA 480
consensus_762#1      GAGAAAATTGCAAATATGTATACGAGTTTAAGCGCTTGTAGAAGTTATTTGTATTCTGTA 372
                     ************************************************************

consensus_762#0      GTTAGATCTTGTGATGCAGGATATATAAATCGAAAAGATTGTGCCGCGGTGATACTTTAC 540
consensus_762#1      GTTAGATCTTGTGATGCAGGATATATAAATCGAAAAGATTGTGCCGCGGTGATACTTTAC 432
                     ************************************************************

consensus_762#0      ATTGCTGAATGCGCTACCAAAGCTGCGTTGGACGCAATTCAAATACTAGGTGGAAATGGC 600
consensus_762#1      ATTGCTGAATGCGCTACCAAAGCTGCGTTGGACGCAATTCAAATACTAGGTGGAAATGGC 492
                     ************************************************************

consensus_762#0      TATATAAATGATTATCCTACTGGAAGATTATTGAGGGATGCAAAATTATACGAAATTGGT 660
consensus_762#1      TATATA------------------------------------------------------ 498
                     ******                                                      

consensus_762#0      GCTGGTAC 668
consensus_762#1      --------
                             




Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)