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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_792#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 667 fasta sequence
[CGATCGAATGTGAATATAAGTCGATGGTTTTTTACAAATTAATCACGGAATAACGAACAAAATGCGTAACGAAATGACAATGTATACGTTAAAACCAATTGTTTCCCTGCCACGAATATTGCATCATAGAAAAATGATGTACGAAATGCGAAATATTCATGAAGAATCAACAGACGACCATACGGAAGCCGAGAACAAGATCGTGCCTGATATCACTGAGCAGGTTATCAGCTTTTTAAAGAGTCCGCTACCAGAATATAATGCATTAGAAGCACGACAAGAAAAAATATTAGCACAACTTGCAGAACTTAAGAAACAAGTTTCAACACTTTCTGGATTTTTAAAACAGACAAATCAAGTTGCAGTAATCAATAAAAGTGTTACAAATCAGAAAGCAGTTAATGTAAATCTTATTATTAATGTAAATCCTAAAAGACCACCATATTTTATATCTGCATTACAAAATTTATGGGAAGACACTGATATTAAAGTACAAACTTATGTTCATTCAAGTATTAATAAAGAAGGATCTTTTGTTTATCAATCAACTACAAACTCTCCTAAAAATAATATTATTAATTTATCATTAATTTGGAAAGATGTTGAAGATCTGCAACTTGTATCTGGTCTACATAGTTATTGTATAACTGGTGAAACAAATTTTCTA]
[+] EMBL BI508817 [CGATCGAATGTGAATATAAGTCGATGGTTTTTTACAAATTAATCACGGAATAACGAACAAAATGCGTAACGAAATGACAATGTATACGTTAAAACCAATTGTTTCCCTGCCACGAATATTGCATCATAGAAAAATGATGTACGAAATGCGAAATATTCATGAAGAATCAACAGACGACCATACGGAAGCCGAGAACAAGATCGTGCCTGATATCACTGAGCAGGTTATCAGCTTTTTAAAGAGTCCGCTACCAGAATATAATGCATTAGAAGCACGACAAGAAAAAATATTAGCACAACTTGCAGAACTTAAGAAACAAGTTTCAACACTTTCTGGATTTTTAAAACAGACAAATCAAGTTGCAGTAATCAATAAAAGTGTTACAAATCAGAAAGCAGTTAATGTAAATCTTATTATTAATGTAAATCCTAAAAGACCACCATATTTTATATCTGCATTACAAAATTTATGGGAAGACACTGATATTAAAGTACAAACTTATGTTCATTCAAGTATTAATAAAGAAGGATCTTTTGTTTATCAATCAACTACAAACTCTCCTAAAAATAATATTATTAATTTATCATTAATTTGGAA ]
[+] EMBL BI503912 [ GTCGATGGTTTTTTACAAATTAATCACGGAATAACGAACAAAATGCGTAACGAAATGACAATGTATACGTTAAAACCAATTGTTTCCCTGCCACGAATATTGCATCATAGAAAAATGATGTACGAAATGCGAAATATTCATGAAGAATCAACAGACGACCATACGGAAGCCGAGAACAAGATCGTGCCTGATATCACTGAGCAGGTTATCAGCTTTTTAAAGAGTCCGCTACCAGAATATAATGCATTAGAAGCACGACAAGAAAAAATATTAGCACAACTTGCAGAACTTAAGAAACAAGTTTCAACACTTTCTGGATTTTTAAAACAGACAAATCAAGTTGCAGTAATCAATAAAAGTGTTACAAATCAGAAAGCAGTTAATGTAAATCTTATTATTAATGTAAATCCTAAAAGACCACCATATTTTATATCTGCATTACAAAATTTATGGGAAGACACTGATATTAAAGTACAAACTTATGTTCATTCAAGTATTAATAAAGAAGGATCTTTTGTTTATCAATCAACTACAAACTCTCCTAAAAATAATATTATTAATTTATCATTAATTTGGAAAGATGTTGAAGATCTGCAACTTGTATCTGGTCTACATAGTTATTGTATAACTGGTGAAACAAATTTTCTA]
consensusID : consensus_792#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 281 fasta sequence
[TTTTTACAAATTAATCACGGAATAACGAACAAAATGCGTAACGAAATGACAATGTATACGTTAAAACCAATTGTTTCCCTGCCACGAATATTGCATCATAGAAAAATGATGTACGAAATGCGAAATATTCATGAAGAATCAACAGACGACCATACGGAAGCCGAGAACAAGATCGTGCCTGATATCACTGAGCAGGTTATCAGCTTTTTAAAGTAAGCATGGTAGCTACGAGTGTTTCTTCTGTCTCGAGCTTGTTGTGCATGACTCCTCCCAAAAAAAAA]
[+] EMBL BI505447 [TTTTTACAAATTAATCACGGAATAACGAACAAAATGCGTAACGAAATGACAATGTATACGTTAAAACCAATTGTTTCCCTGCCACGAATATTGCATCATAGAAAAATGATGTACGAAATGCGAAATATTCATGAAGAATCAACAGACGACCATACGGAAGCCGAGAACAAGATCGTGCCTGATATCACTGAGCAGGTTATCAGCTTTTTAAAGTAAGCATGGTAGCTACGAGTGTTTCTTCTGTCTCGAGCTTGTTGTGCATGACTCCTCCCAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_792#0 CGATCGAATGTGAATATAAGTCGATGGTTTTTTACAAATTAATCACGGAATAACGAACAA 60
consensus_792#1 ----------------------------TTTTTACAAATTAATCACGGAATAACGAACAA 32
********************************
consensus_792#0 AATGCGTAACGAAATGACAATGTATACGTTAAAACCAATTGTTTCCCTGCCACGAATATT 120
consensus_792#1 AATGCGTAACGAAATGACAATGTATACGTTAAAACCAATTGTTTCCCTGCCACGAATATT 92
************************************************************
consensus_792#0 GCATCATAGAAAAATGATGTACGAAATGCGAAATATTCATGAAGAATCAACAGACGACCA 180
consensus_792#1 GCATCATAGAAAAATGATGTACGAAATGCGAAATATTCATGAAGAATCAACAGACGACCA 152
************************************************************
consensus_792#0 TACGGAAGCCGAGAACAAGATCGTGCCTGATATCACTGAGCAGGTTATCAGCTTTTTAAA 240
consensus_792#1 TACGGAAGCCGAGAACAAGATCGTGCCTGATATCACTGAGCAGGTTATCAGCTTTTTAAA 212
************************************************************
consensus_792#0 GAGTCC------GCTACCAGAATATAATGCATTAGAAGCACGACAAGAAAAAATATTAGC 294
consensus_792#1 GTAAGCATGGTAGCTACGAGTGTTTCTTCTGTCTCGAGCTTGTTGTGCATGACTCCTCCC 272
* * ***** ** * * * * *** * * * * * * *
consensus_792#0 ACAACTTGCAGAACTTAAGAAACAAGTTTCAACACTTTCTGGATTTTTAAAACAGACAAA 354
consensus_792#1 AAAAA----AAAA----------------------------------------------- 281
* ** * **
consensus_792#0 TCAAGTTGCAGTAATCAATAAAAGTGTTACAAATCAGAAAGCAGTTAATGTAAATCTTAT 414
consensus_792#1 ------------------------------------------------------------
consensus_792#0 TATTAATGTAAATCCTAAAAGACCACCATATTTTATATCTGCATTACAAAATTTATGGGA 474
consensus_792#1 ------------------------------------------------------------
consensus_792#0 AGACACTGATATTAAAGTACAAACTTATGTTCATTCAAGTATTAATAAAGAAGGATCTTT 534
consensus_792#1 ------------------------------------------------------------
consensus_792#0 TGTTTATCAATCAACTACAAACTCTCCTAAAAATAATATTATTAATTTATCATTAATTTG 594
consensus_792#1 ------------------------------------------------------------
consensus_792#0 GAAAGATGTTGAAGATCTGCAACTTGTATCTGGTCTACATAGTTATTGTATAACTGGTGA 654
consensus_792#1 ------------------------------------------------------------
consensus_792#0 AACAAATTTTCTA 667
consensus_792#1 -------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |