These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_848#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 482 fasta sequence [AGGAATCAACAAATTAAATGGCAATCATATCTACAGTCTCATATGATATCAAAAGAAGATCATGATTTTATAGTAGCTTTTGATACAAATGATCCTAATGTTCGAGATGCAAAACTCAAGGAAAATCCACATCAAGCTGCTAAAACATTTCTTAATTTACTTGGTCATATTTCAAAAGATCAAACTATTCAATATATACTTACAATGATTGATGACATGCTTCAGGAAGATCGTAGTCGTGTAGAAATCTTTAGAGAACATTCGAATCGCAAACGTGAATCAGTATGGGGTCCTTTTTTGAATTTGTTAAATAGACAAGATGGATTTATAATGAATATGACCTCACGAATTATTGCTAAACTTGCTTGTTGGAGTCATGATCTAATGGAAAAAACAGATCTTCAATTTTACTTGACATGGTTAAAAGATCAATTGAAACTCAGTAATAATGAATATATTCAATCTGTGGCACGTTGTTTACA] [+] EMBL BI504920 [AGGAATCAACAAATTAAATGGCAATCATATCTACAGTCTCATATGATATCAAAAGAAGATCATGATTTTATAGTAGCTTTTGATACAAATGATCCTAATGTTCGAGATGCAAAACTCAAGGAAAATCCACATCAAGCTGCTAAAACATTTCTTAATTTACTTGGTCATATTTCAAAAGATCAAACTATTCAATATATACTTACAATGATTGATGACATGCTTCAGGAAGATCGTAGTCGTGTAGAAATCTTTAGAGAACATTCGAATCGCAAACGTGAATCAGTATGGGGTCCTTTTTTGAATTTGTTAAATAGACAAGATGGATTTATAATGAATATGACCTCACGAATTATTGCTAAACTTGCTTGTTGGAGTCATGATCTAATGGAAAAAACAGATCTTCAATTTTACTTGACATGGTTAAAAGATCAATTGAAACTCAGTAATAATGAATATATTCAATCTGTGGCACGTTGTTTACA] consensusID : consensus_848#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 470 fasta sequence [TATTAAAGAAATGATACCTGCTTTGCCAGATGAAAAAATTGATATGCTAGCAGCTACAAGTATTCTACAACAACAAGCTGCTGACATTAGGAATCAACAAATTAAATGGCAATCATATCTACAGTCTCATATGATATCAAAAGAAGATCATGATTTTATAGTAGCTTTTGATACAAATGATCCTAATGTTCGAGATGCAAAACTCAAGGAAAATCCACATCAAGCTGCTAAAACATTTCTTAATTTACTTGGTCATATTTCAAAAGATCAAACTATTCAATATATACTTACAATGATTGATGACATGCTTCAGGAAGATCGTAGTCGTGTAGAAATCTTTAGAGAACATTCGAATCGCAAACGTGAATCAGTATGGGGTCCTTTTTTGAATTTGTTAAATAGACAAGATGGATTTATAATGAATATGACCTCACGAATTATTGCTAAACTTGTCTATGTAAAAAAAAAAA] [+] EMBL BI516563 [TATTAAAGAAATGATACCTGCTTTGCCAGATGAAAAAATTGATATGCTAGCAGCTACAAGTATTCTACAACAACAAGCTGCTGACATTAGGAATCAACAAATTAAATGGCAATCATATCTACAGTCTCATATGATATCAAAAGAAGATCATGATTTTATAGTAGCTTTTGATACAAATGATCCTAATGTTCGAGATGCAAAACTCAAGGAAAATCCACATCAAGCTGCTAAAACATTTCTTAATTTACTTGGTCATATTTCAAAAGATCAAACTATTCAATATATACTTACAATGATTGATGACATGCTTCAGGAAGATCGTAGTCGTGTAGAAATCTTTAGAGAACATTCGAATCGCAAACGTGAATCAGTATGGGGTCCTTTTTTGAATTTGTTAAATAGACAAGATGGATTTATAATGAATATGACCTCACGAATTA ] [+] EMBL BI503627 [ CCAGATGAAAAAATTGATATGCTAGCAGCTACAAGTATTCTACAACAACAAGCTGCTGACATTAGGAATCAACAAATTAAATGGCAATCATATCTACAGTCTCATATGATATCAAAAGAAGATCATGATTTTATAGTAGCTTTTGATACAAATGATCCTAATGTTCGAGATGCAAAACTCAAGGAAAATCCACATCAAGCTGCTAAAACATTTCTTAATTTACTTGGTCATATTTCAAAAGATCAAACTATTCAATATATACTTACAATGATTGATGACATGCTTCAGGAAGATCGTAGTCGTGTAGAAATCTTTAGAGAACATTCGAATCGCAAACGTGAATCAGTATGGGGTCCTTTTTTGAATTTGTTAAATAGACAAGATGGATTTATAATGAATATGACCTCACGAATTATTGCTAAACTTGTCTATGTAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_848#0 ------------------------------------------------------------ consensus_848#1 TATTAAAGAAATGATACCTGCTTTGCCAGATGAAAAAATTGATATGCTAGCAGCTACAAG 60 consensus_848#0 ----------------------------AGGAATCAACAAATTAAATGGCAATCATATCT 32 consensus_848#1 TATTCTACAACAACAAGCTGCTGACATTAGGAATCAACAAATTAAATGGCAATCATATCT 120 ******************************** consensus_848#0 ACAGTCTCATATGATATCAAAAGAAGATCATGATTTTATAGTAGCTTTTGATACAAATGA 92 consensus_848#1 ACAGTCTCATATGATATCAAAAGAAGATCATGATTTTATAGTAGCTTTTGATACAAATGA 180 ************************************************************ consensus_848#0 TCCTAATGTTCGAGATGCAAAACTCAAGGAAAATCCACATCAAGCTGCTAAAACATTTCT 152 consensus_848#1 TCCTAATGTTCGAGATGCAAAACTCAAGGAAAATCCACATCAAGCTGCTAAAACATTTCT 240 ************************************************************ consensus_848#0 TAATTTACTTGGTCATATTTCAAAAGATCAAACTATTCAATATATACTTACAATGATTGA 212 consensus_848#1 TAATTTACTTGGTCATATTTCAAAAGATCAAACTATTCAATATATACTTACAATGATTGA 300 ************************************************************ consensus_848#0 TGACATGCTTCAGGAAGATCGTAGTCGTGTAGAAATCTTTAGAGAACATTCGAATCGCAA 272 consensus_848#1 TGACATGCTTCAGGAAGATCGTAGTCGTGTAGAAATCTTTAGAGAACATTCGAATCGCAA 360 ************************************************************ consensus_848#0 ACGTGAATCAGTATGGGGTCCTTTTTTGAATTTGTTAAATAGACAAGATGGATTTATAAT 332 consensus_848#1 ACGTGAATCAGTATGGGGTCCTTTTTTGAATTTGTTAAATAGACAAGATGGATTTATAAT 420 ************************************************************ consensus_848#0 GAATATGACCTCACGAATTATTGCTAAACTTGCTTGTTGGAGTCATGATCTAATGGAAAA 392 consensus_848#1 GAATATGACCTCACGAATTATTGCTAAACTTGTCT------------ATGTAAAAAAAAA 468 ******************************** * ** *** **** consensus_848#0 AACAGATCTTCAATTTTACTTGACATGGTTAAAAGATCAATTGAAACTCAGTAATAATGA 452 consensus_848#1 AA---------------------------------------------------------- 470 ** consensus_848#0 ATATATTCAATCTGTGGCACGTTGTTTACA 482 consensus_848#1 ------------------------------ |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |