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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_908#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 545 fasta sequence
[GTCGGATGGAGGTGAAGTGGCCTTGGATTGGGCAGAAGAGGGATGTTCGGCTGTTTCGCCGATTGTGATTATTTTGCCAGGACTCACTGGCGCAAGTCAAGCGGAATATATCAAGTGCCTTGTCTCATCAGCGAAAAAAGTTGGGATACGATGCGTAATCTTCAATAATAGAGGTTTAGGAGGCGTAGAATTGAAGACTCCACGAACATATTGCGCTGCAAATAGCGACGATTTAACAGAGGTTGTTGACTATGTGAAGAAGATTCATCCCAATGTGCTTCTTGGAGCGACGGGAATCTCGATGGGAGGATTAATTTTAGGCAATTATTTAGCACGACAAGGGAAAATAGCCAAAAATAAATTGAAAGGATGTTTCTTGATTTCTGTGCCATGGAACGTATTTGCCGCGACAAAGAGCACAGAGGAGAATTATTTTAACTTGATTTTAAATAAATATTTAGCCTTTTCACTTCGGCAACAAGTAAAACGCTTGCATTATTCCTCGGAAAGTGGAATGTTCGACGTTGATATCGATTCTCTTCTTA]
[+] EMBL BI516450 [GTCGGATGGAGGTGAAGTGGCCTTGGATTGGGCAGAAGAGGGATGTTCGGCTGTTTCGCCGATTGTGATTATTTTGCCAGGACTCACTGGCGCAAGTCAAGCGGAATATATCAAGTGCCTTGTCTCATCAGCGAAAAAAGTTGGGATACGATGCGTAATCTTCAATAATAGAGGTTTAGGAGGCGTAGAATTGAAGACTCCACGAACATATTGCGCTGCAAATAGCGACGATTTAACAGAGGTTGTTGACTATGTGAAGAAGATTCATCCCAATGTGCTTCTTGGAGCGACGGGAATCTCGATGGGAGGATTAATTTTAGGCAATTATTTAGCACGACAAGGGAAAATAGCCAAAAATAAATTGAAAGGATGTTTCTTGATTTCTGTGCCATGGAACGTATTTGCCGCGACAAAGAGCACAGAGGAGAATTATTTTAACTTGATTTTAAATAAATATTTAGCCTTTTCACTTCGGCAACAAGTAAAACGCTTGCATTATTCCTCGGAAAGTGGAATGTTCGACGTTG ]
[+] EMBL BI515356 [ CAAGTCAAGCGGAATATATCAAGTGCCTTGTCTCATCAGCGAAAAAAGTTGGGATACGATGCGTAATCTTCAATAATAGAGGTTTAGGAGGCGTAGAATTGAAGACTCCACGAACATATTGCGCTGCAAATAGCGACGATTTAACAGAGGTTGTTGACTATGTGAAGAAGATTCATCCCAATGTGCTTCTTGGAGCGACGGGAATCTCGATGGGAGGATTAATTTTAGGCAATTATTTAGCACGACAAGGGAAAATAGCCAAAAATAAATTGAAAGGATGTTTCTTGATTTCTGTGCCATGGAACGTATTTGCCGCGACAAAGAGCACAGAGGAGAATTATTTTAACTTGATTTTAAATAAATATTTAGCCTTTTCACTTCGGCAACAAGTAAAACGCTTGCATTATTCCTCGGAAAGTGGAATGTTCGACGTTGATATCGATTCTCTTCTTA]
consensusID : consensus_908#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 465 fasta sequence
[GCTTGCATTATTCCTCGGAAAGTGGAATGTTCGACGTTGATATCGATTCTCTTCTTAAAAGTCAAACTGTAAGAGAGTTTGATTCACAATTTACGGTGAAACAATTCGGCTATAAAGATGTAGAGGATTATTATTCCAACGCAACTATACATGACAAATTACATTTGATTGACGTACCATTATTGTGTCTTAGCGCTGCGGACGATCCATTTCAACCAGTTCAAGCCATACCGTTGAAGGAAATATCACAAACTAAAAAAATAGCTGTTGTTGTAACATCTCGTGGTGGGCATATTGGTTTCATGGAGGGTATGTGGCCGGTAAAAGAAGAACAATATATGGGTAAATTATTTTCACAGTTTTTTACCGCTCTGTTCACTACTAATTTAGAGCATCAATTATTGTGACGAACTTAATAAACTAAATACCAAATGCATTCACAAATATCAATATCAAATATTTCGT]
[+] EMBL BI511186 [GCTTGCATTATTCCTCGGAAAGTGGAATGTTCGACGTTGATATCGATTCTCTTCTTAAAAGTCAAACTGTAAGAGAGTTTGATTCACAATTTACGGTGAAACAATTCGGCTATAAAGATGTAGAGGATTATTATTCCAACGCAACTATACATGACAAATTACATTTGATTGACGTACCATTATTGTGTCTTAGCGCTGCGGACGATCCATTTCAACCAGTTCAAGCCATACCGTTGAAGGAAATATCACAAACTAAAAAAATAGCTGTTGTTGTAACATCTCGTGGTGGGCATATTGGTTTCATGGAGGGTATGTGGCCGGTAAAAGAAGAACAATATATGGGTAAATTATTTTCACAGTTTTTTACCGCTCTGTTCACTACTAATTTAGAGCATCAATTATTGTGACGAACTTAATAAACTAAATACCAAATGCATTCACAAATATCAATATCAAATATTTCGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_908#0 GTCGGATGGAGGTGAAGTGGCCTTGGATTGGGCAGAAGAGGGATGTTCGGCTGTTTCGCC 60
consensus_908#1 ---------------GCTTGCATTATTCCTCGGA-AAGTGGAATGTTCGAC------GTT 38
* ** ** * * *** ** ******* * *
consensus_908#0 GATTGTGATTATTTTGCCAGGACTCACTGGCGCAAGTCAAGCGGAATATATCAAGTGCCT 120
consensus_908#1 GATATCGATTCTCTTCTTAAAAGTCAA-ACTGTAAGA-GAGTTTGATTCACAATTTACGG 96
*** **** * ** * * *** * *** ** ** * * * *
consensus_908#0 TGTCTCA--TCAGCGAAAAAAGT-TGGGATACGATGCGTAATCTTCAATAATAGAGGTTT 177
consensus_908#1 TGAAACAATTCGGCTATAAAGATGTAGAGGATTATTATTCCAACGCAACTATACATGAC- 155
** ** ** ** * *** * * * * ** * *** *** * *
consensus_908#0 AGGAGGCGTAGAATTGAAGACTCCACGAACATATT---GCGCTGCAAATAGCGACGATTT 234
consensus_908#1 AAATTACATTTGATTGACG-TACCATTATTGTGTCTTAGCGCTGCGGACGATC-CATTTC 213
* * * ***** * *** * * * ******* * * **
consensus_908#0 AACAGAGGTTGTTGACTATGT-GAAGAAGATT---CATCCCAATGTGCTTCTTGGAGCGA 290
consensus_908#1 AACCAGTTCAAGCCATACCGTTGAAGGAAATATCACAAACTAAAAAAATAGCTGTTGTTG 273
*** * ** **** * ** ** * ** * ** *
consensus_908#0 CGGGAA-TCTCGATGGGAGGATTAATTTTA-GGCAATTATTTAGCACGACAAGGGAAAAT 348
consensus_908#1 TAACATCTCGTGGTGGGCATATTGGTTTCATGGAGGGTATGTGGCCGGTAAAAGAAGAAC 333
* ** * **** *** *** * ** *** * ** * ** * * **
consensus_908#0 AGC-CAAAAATAAATTGAAAGGATGTTTCTTGATTTCTGTGCCATGGAACGTATTTGCCG 407
consensus_908#1 AATATATGGGTAAATTATTTTCACAGTTTTTTACCGCTCTGTT-CACTACTAATTTAGAG 392
* * ****** * ** ** * ** ** ** **** *
consensus_908#0 CGACAAAGAGCACAGAGGAGAATTATTTTAACTTGATTTTAAATAAATATTTAGCCTTTT 467
consensus_908#1 CATCAA---TTATTGTGACGAACTTAATAAACTAAATACCAAATGCATTCACAA------ 443
* *** * * * *** * * **** ** **** ** *
consensus_908#0 CACTTCGGCAACAAGTAAAACGCTTGCATTATTCCTCGGAAAGTGGAATGTTCGACGTTG 527
consensus_908#1 -ATATCAATATCAAATATTTCGT------------------------------------- 465
* ** * *** ** **
consensus_908#0 ATATCGATTCTCTTCTTA 545
consensus_908#1 ------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |