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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_910#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1000 fasta sequence
[TTAAAGTTGATATGCAAGGAACAATCGTGGAACAAGGAACAACCAATTTTGGGGTTCATGTGGCAGGATTTCAATTGCATTCAACAATCCATGCTGCAAGACCTGATATAAAATGCATTGTTCATATTACCACTCCGTCCGTTACTGCTATCTCGTCATTGAAGTGCGGATTATTGCCAATAGGACANNNAAGTATAGTAATAGGAGAGGTAAGCACGCATCAATATATAGGTGGATTTTTTGAACCAGAGGAAAAAGAGAAGATAGCAAGAAATCTTGGTCCAATGAACAAAATCATGTTGTTAACGAATCGCGGTGCTCTCTGTTGTGGAGAAACTGTCGAAGAAGCTTTCTTCAATGTTTATAATATGGTCCTAGCTTGTGAGACTCAATTGAAATTAATGCCTGCCGGTTTGGATAATTTAAATCTTATTTCTGAAGAATCTAAAAAAGCTATATTCGAAGCTTCGAGAAAACCACCGACACCGCAACAAACAGTTCCAATCTCTGAAACTACAGCTCTTACTGAGAAACTTGAAAAGCGTTGGCGAATCGGTGGAACTGAATTCGNAGCTCTTATGCGGATGCTTGATAATGCTGGTTTCCGAACTGGTTATATATACAGAAATCCATTAGTGAAAGGAGAACCTCCGCGGCCTCGAAATGATGTAGAAGTACCGCCAGCGGTCTCGTCTTTAGGATATTTACTTGAAGAGGAAGAATTATATAAACAAGGACTTTGGAAAGGTGGTCGTAAAGGTACAGATAGATCACGTTGGTTAAATTCGCCCAATGTATATCAAAAGGTCGAGATACTTGAAACAGGAACTCCTGATCCGAAGAAAATAACAAAGGTAGAAGTCATCACTTTTGAGAATAAAGATGAGTAGATGTAACGGCGTGCTTCTATAATGAAAGATCAACAAAATTGATATAAATATAAAAGTATAAAGTAATGTATGGAAAAAAAGTGAAATTTGCGCAAGCATTACAACCATCT]
[+] EMBL BI509166 [TTAAAGTTGATATGCAAGGAACAATCGTGGAACAAGGAACAACCAATTTTGGGGTTCATGTGGCAGGATTTCAATTGCATTCAACAATCCATGCTGCAAGACCTGATATAAAATGCATTGTTCATATTACCACTCCGTCCGTTACTGCTATCTCGTCATTGAAGTGCGGATTATTGCCAATAGGACANNNAAGTATAGTAATAGGAGAGGTAAGCACGCATCAATATATAGGTGGATTTTTTGAACCAGAGGAAAAAGAGAAGATAGCAAGAAATCTTGGTCCAATGAACAAAATCATGTTGTTAACGAATCGCGGTGCTCTCTGTTGTGGAGAAACTGTCGAAGAAGCTTTCTTCAATGTTTATAATATGGTCCTAGCTTGTGAGACTCAATTGAAATTAATGCCTGCCGGTTTGGATAATTTAAATCTTATTTCTGAAGAATCTAAAAAAGCTATATTCGAAGCTTCGAGAAAACCACCGACACCGCAACAAACAGTTCCAATCTCTGAAACTACAGCTCTTACTGAGAAACTTGAAAAGCGTTGGCGAATCGGTGGAACTGAATTCGNAGCTCTTATGCGGATGCTTGATAATG ]
[+] EMBL BI509953 [ TTTATAATATGGTCCTAGCTTGTGAGACTCAATTGAAATTAATGCCTGCCGGTTTGGATAATTTAAATCTTATTTCTGAAGAATCTAAAAAAGCTATATTCGAAGCTTCGAGAAAACCACCGACACCGCAACAAACAGTTCCAATCTCTGAAACTACAGCTCTTACTGAGAAACTTGAAAAGCGTTGGCGAATCGGTGGAACTGAATTCGAAGCTCTTATGCGGATGCTTGATAATGCTGGTTTCCGAACTGGTTATATATACAGAAATCCATTAGTGAAAGGAGAACCTCCGCGGCCTCGAAATGATGTAGAAGTACCGCCAGCGGTCTCGTCTTTAGGATATTTACTTGAAGAGGAAGAATTATATAAACAAGGACTTTGGAAAGGTGGTCGTAAAGGTACAGATAGATCACGTTGGTTAAATTCGCCCAATGTATATCAAAAGGTCGAGATACTTGAAACAGGAACTCCTGATCCGAAGAAAATAACAAAGGTAGAAGTCATCACTTTTGAGAATAAAGATGAGTAGATGTAACGGCGTGCTTCTATAATGAAAGATCAACAAAATTGATATAAATATAAAAGTATAAAGTAATGTATGGAAAAAAAGTGAAATTTGCGCAAGCATTACAACCATCT]
consensusID : consensus_910#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 583 fasta sequence
[ATTTGTTATCACTATCACCACCACTTTCACATTTACCACTACTATCACTAACACTGTCACTATCGTCTTCGTCGTCACCACCGTCACCGCAACAAACAGTTCCAATCTCTGAAACTACAGCTCTTACTGAGAAACTTGAAAAGCGTTGGCGAATCGGTGGAACTGAATTCGAAGCTCTTATGCGGATGCTTGATAATGCTGGTTTCCGAACTGGTTATATATACAGAAATCCATTAGTGAAAGGAGAACCTCCGCGGCCTCGAAATGATGTAGAAGTACCGCCAGCGGTCTCGTCTTTAGGATATTTACTTGAAGAGGAAGAATTATATAAACAAGGACTTTGGAAAGGTGGTCGTAAAGGTACAGATAGATCACGTTGGTTAAATTCGCCCAATGTATATCAAAAGGTCGAGATACTTGAAACAGGAACTCCTGATCCGAAGAAAATAACAAAGGTAGAAGTCATCACTTTTGAGAATAAAGATGAGTAGATGTAACGGCGTGCTTCTATAATGAAAGATCAACAAAATTGATATAAATATAAAAGTATAAAGTAATGTATGGAAAAAAAGTGAAATTTGCG]
[+] EMBL BI503378 [ATTTGTTATCACTATCACCACCACTTTCACATTTACCACTACTATCACTAACACTGTCACTATCGTCTTCGTCGTCACCACCGTCACCGCAACAAACAGTTCCAATCTCTGAAACTACAGCTCTTACTGAGAAACTTGAAAAGCGTTGGCGAATCGGTGGAACTGAATTCGAAGCTCTTATGCGGATGCTTGATAATGCTGGTTTCCGAACTGGTTATATATACAGAAATCCATTAGTGAAAGGAGAACCTCCGCGGCCTCGAAATGATGTAGAAGTACCGCCAGCGGTCTCGTCTTTAGGATATTTACTTGAAGAGGAAGAATTATATAAACAAGGACTTTGGAAAGGTGGTCGTAAAGGTACAGATAGATCACGTTGGTTAAATTCGCCCAATGTATATCAAAAGGTCGAGATACTTGAAACAGGAACTCCTGATCCGAAGAAAATAACAAAGGTAGAAGTCATCACTTTTGAGAATAAAGATGAGTAGATGTAACGGCGTGCTTCTATAATGAAAGATCAACAAAATTGATATAAATATAAAAGTATAAAGTAATGTATGGAAAAAAAGTGAAATTTGCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_910#0 TTAAAGTTGATATGCAAGGAACAATCGTGGAACAAGGAACAACCAATTTTGGGGTTCATG 60
consensus_910#1 ------------------------------------------------------------
consensus_910#0 TGGCAGGATTTCAATTGCATTCAACAATCCATGCTGCAAGACCTGATATAAAATGCATTG 120
consensus_910#1 ------------------------------------------------------------
consensus_910#0 TTCATATTACCACTCCGTCCGTTACTGCTATCTCGTCATTGAAGTGCGGATTATTGCCAA 180
consensus_910#1 ------------------------------------------------------------
consensus_910#0 TAGGACANNNAAGTATAGTAATAGGAGAGGTAAGCACGCATCAATATATAGGTGGATTTT 240
consensus_910#1 ------------------------------------------------------------
consensus_910#0 TTGAACCAGAGGAAAAAGAGAAGATAGCAAGAAATCTTGGTCCAATGAACAAAATCATGT 300
consensus_910#1 ------------------------------------------------------------
consensus_910#0 TGTTAACGAATCGCGGTGCTCTCTGTTGTGGAGAAACTGTCGAAGAAGCTTTCTTCAATG 360
consensus_910#1 ------------------------------------------------------------
consensus_910#0 TTTATAATATGGTCCTAGCTTGTGAGACTCAATTGAAATTAATGCCTGCCGGTTTGGATA 420
consensus_910#1 -------------------------------------ATTTGTTATCACTATCACCACCA 23
*** * * *
consensus_910#0 ATTTAAATCTTATTTCTGAAGAATCTAAAAAAGCTATATTCGAAGCTTCGAGAAAACCAC 480
consensus_910#1 CTTTCACATTTACCACTACTATCACTAACACTGTCACTATCG--TCTTCGTCGTCACCAC 81
*** * *** ** **** * * * *** ***** *****
consensus_910#0 CGACACCGCAACAAACAGTTCCAATCTCTGAAACTACAGCTCTTACTGAGAAACTTGAAA 540
consensus_910#1 CGTCACCGCAACAAACAGTTCCAATCTCTGAAACTACAGCTCTTACTGAGAAACTTGAAA 141
** *********************************************************
consensus_910#0 AGCGTTGGCGAATCGGTGGAACTGAATTCGNAGCTCTTATGCGGATGCTTGATAATGCTG 600
consensus_910#1 AGCGTTGGCGAATCGGTGGAACTGAATTCGAAGCTCTTATGCGGATGCTTGATAATGCTG 201
****************************** *****************************
consensus_910#0 GTTTCCGAACTGGTTATATATACAGAAATCCATTAGTGAAAGGAGAACCTCCGCGGCCTC 660
consensus_910#1 GTTTCCGAACTGGTTATATATACAGAAATCCATTAGTGAAAGGAGAACCTCCGCGGCCTC 261
************************************************************
consensus_910#0 GAAATGATGTAGAAGTACCGCCAGCGGTCTCGTCTTTAGGATATTTACTTGAAGAGGAAG 720
consensus_910#1 GAAATGATGTAGAAGTACCGCCAGCGGTCTCGTCTTTAGGATATTTACTTGAAGAGGAAG 321
************************************************************
consensus_910#0 AATTATATAAACAAGGACTTTGGAAAGGTGGTCGTAAAGGTACAGATAGATCACGTTGGT 780
consensus_910#1 AATTATATAAACAAGGACTTTGGAAAGGTGGTCGTAAAGGTACAGATAGATCACGTTGGT 381
************************************************************
consensus_910#0 TAAATTCGCCCAATGTATATCAAAAGGTCGAGATACTTGAAACAGGAACTCCTGATCCGA 840
consensus_910#1 TAAATTCGCCCAATGTATATCAAAAGGTCGAGATACTTGAAACAGGAACTCCTGATCCGA 441
************************************************************
consensus_910#0 AGAAAATAACAAAGGTAGAAGTCATCACTTTTGAGAATAAAGATGAGTAGATGTAACGGC 900
consensus_910#1 AGAAAATAACAAAGGTAGAAGTCATCACTTTTGAGAATAAAGATGAGTAGATGTAACGGC 501
************************************************************
consensus_910#0 GTGCTTCTATAATGAAAGATCAACAAAATTGATATAAATATAAAAGTATAAAGTAATGTA 960
consensus_910#1 GTGCTTCTATAATGAAAGATCAACAAAATTGATATAAATATAAAAGTATAAAGTAATGTA 561
************************************************************
consensus_910#0 TGGAAAAAAAGTGAAATTTGCGCAAGCATTACAACCATCT 1000
consensus_910#1 TGGAAAAAAAGTGAAATTTGCG------------------ 583
**********************
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |