These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_922#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 461 fasta sequence [TTTTTTTTTTTATATATATATATATATACTTATCACGGAGATTACACGGATAAAACAATTGGAAAATTGATTGTTATCTAATTGCCTCGTAAACCGATAAACACCGAGTTTATACAACGGGTTTAATAGTTAAAAGAACGTAATATCTGATATCGAGAATCGGGAATTAATTACGATTATTTACATAGCGAAGGTAATTTCGAAATACAGAGCGGTCCATTATTGAACTTTGTAACTAATTAATTTCCCGACCTACGTGAATATAATCGGGNNNAATATAATTTTTGTAAATATTTTATTATCTCATCGCGTATATCACCTCTTCTCTTTTTAGTTGCATCGACGGACCATNNNGTAACGAATTATATATATTTCTTTATTTATCGAAAACGCACGTGAGCTTTGCATCATCAGTTTATCGTTTCTTTTATAAAATACGTTATAAACGATACGATATACAT] [+] EMBL BI514132 [TTTTTTTTTTTATATATATATATATATACTTATCACGGAGATTACACGGATAAAACAATTGGAAAATTGATTGTTATCTAATTGCCTCGTAAACCGATAAACACCGAGTTTATACAACGGGTTTAATAGTTAAAAGAACGTAATATCTGATATCGAGAATCGGGAATTAATTACGATTATTTACATAGCGAAGGTAATTTCGAAATACAGAGCGGTCCATTATTGAACTTTGTAACTAATTAATTTCCCGACCTACGTGAATATAATCGGGGGGAATATAATTTTTGTAAATATTTTATTATCTCATCGCGTATATCACCTCTTCTCTTTTTAGTTGCATCGACGGACCATNNNGTAACGAATTATATATATTTCTTTATTTATCGAAAACGCACGTGAGCTTTGCATCATCAGTTTATCGTTTCTTTTATAAAATACG ] [+] EMBL BI513982 [ TTTTTTTATATATATATATATATACTTATCACGGAGATTACACGGATAAAACAATTGGAAAATTGATTGTTATCTAATTGCCTCGTAAACCGATAAACACCGAGTTTATACAACGGGTTTAATAGTTAAAAGAACGTAATATCTGATATCGAGAATCGGGAATTAATTACGATTATTTACATAGCGAAGGTAATTTCGAAATACAGAGCGGTCCATTATTGAACTTTGTAACTAATTAATTTCCCGACCTACGTGAATATAATCGGGNNNAATATAATTTTTGTAAATATTTTATTATCTCATCGCGTATATCACCTCTTCTCTTTTTAGTTGCATCGACGGACCATTCTGTAACGAATTATATATATTTCTTTATTTATCGAAAACGCACGTGAGCTTTGCATCATCAGTTTATCGTTTCTTTTATAAAATACGTTATAAACGATACGATATACAT] consensusID : consensus_922#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 402 fasta sequence [TATATTTCACTTCAATCGAATCTTGTTAACGAATCGATGGAAAAAAAAAATATATATATATATATATATACATGTACATGATTCTTTGATTTCAATTGATCGTTACGTAAAAATAAAAAGCAGATAAATAAATGAAAGGAAAAGAAGGAGACGAATAGCGAATTTATGGGAGTATGCCGAGTGCAGGTCTATCTCACGTGTCTCAGAATGTAGGGAACGAGTTTCCTGAGTGGTTTCCCGTGTTCACTATTGCTATGTACACACAAATGCATCAAATACTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATACACGTTTTATATTTCATATGTATATCGTATCGTTTATAACGTATTTTATAAAAGAAACGATAAACTGATGATGCAAAAAAAA] [+] EMBL BI509314 [TATATTTCACTTCAATCGAATCTTGTTAACGAATCGATGGAAAAAAAAAATATATATATATATATATATACATGTACATGATTCTTTGATTTCAATTGATCGTTACGTAAAAATAAAAAGCAGATAAATAAATGAAAGGAAAAGAAGGAGACGAATAGCGAATTTATGGGAGTATGCCGAGTGCAGGTCTATCTCACGTGTCTCAGAATGTAGGGAACGAGTTTCCTGAGTGGTTTCCCGTGTTCACTATTGCTATGTACACACAAATGCATCAAATACTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATACACGTTTTATATTTCATATGTATATCGTATCGTTTATAACGTATTTTATAAAAGAAACGATAAACTGATGATGCAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_922#0 TTTTTTTTTTTATATATATATATATATACTTATCACGGAGATTACACGGATAAAACAATT 60 consensus_922#1 ------------------------------------------------------------ consensus_922#0 GGAAAATTGATTGTTATCTAATTGCCTCG-TAAACCGATAAACACCGAGTTTATACAACG 119 consensus_922#1 -TATATTTCACTTCAATCGAATCTTGTTAACGAATCGATGGAAAAAAAAAATATATA-TA 58 * * ** * * *** *** * ** **** * * * **** * consensus_922#0 GGTTTAATAGTTAAAAGAACGTAATA-TCTGATATCGAGAATCGGGAATTAATTACGATT 178 consensus_922#1 TATATA-TATATACATGTACATGATTCTTTGATTTC---AATTGATCGTTACGTAAAAAT 114 * ** ** ** * * ** * ** * **** ** *** * *** ** * * consensus_922#0 ATTTACATAGCGAAGGTAATTTCGAAATACAGAGCGGTCCATTATTGAACTTTGTAACTA 238 consensus_922#1 AAA-AAGCAGATAAATAAATGAAAGGAAAAGAAGGAGACGAATAGCGAA-TTTATGGG-- 170 * * ** ** *** * * ** * * * ** *** *** * consensus_922#0 ATTAATTTCCCGACCTACGTGAATATAATCGGGNNNAATATAATTTTTGTAAATATTTTA 298 consensus_922#1 ---AGTATGCCGAG-TGCAGGTCTATC-TCACGTGTCTCAGAATGTAGGGAACGAGTTTC 225 * * * **** * * * *** ** * * *** * * ** * *** consensus_922#0 TTATCTCATCGCGTATATCACCTCTTCTCTTTTTAGTTGCATCGACGGACCATNNNGTAA 358 consensus_922#1 CTGAGTGGTTTCCCGTGTTCACTATTG-CTATGTA--CACACAAATGCATCAAATACTTG 282 * * * * * * ** ** ** * ** ** * * * ** * consensus_922#0 CGAAT-TATATATATTTCTTTATTTAT-CGAAAACGCACGTGAGCTTTGCATCATCAGTT 416 consensus_922#1 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATACACGTTTTATATTTCATATGTA 342 * * * * * * * * * * * * * * * ** * * * **** ** consensus_922#0 TATCGTTTCTTTTATAAAATACGTTATAAACGATACGATATACAT--------------- 461 consensus_922#1 TATCGTATCGTTTATAACGTATTTTATAAAAGAAACGATAAACTGATGATGCAAAAAAAA 402 ****** ** ******* ** ******* ** ****** ** |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |