These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_942#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 588 fasta sequence [CAAGAAGAAGAAATGGAGGCCGTTCAACGTGCGGAGGTTGGAGGAGTTGGCAACGCCGCCCGCGAGAGAGATGCCTGTGGGTAGGGACCCGTTCAAAGTGCCGATAACCGCTCTTACCTACAAGATTAGCAAACGCCTTCTCAAGATCGCGTTCCCGAAAGTACCGACGGAGATCATGCCGCCTCGTGTCCCCGGTCAGGTCTCTCCGGCCGCGCTCAAGGCCGTAGGTACCTACTTCTCCAATTTTTTTCCTTCGTCTCTCTTTCTCTCTTTCTCTCTTTCCCTCCCCCCTCCTCGCTTCCAACTTGCCACTCAACGCGGACGAAAAATTTTCGACGGGTCTCGTCGCGCGTGTTTACTTAAAACTGGAGTTGGAAAATGGCCAAGTTGGAAAATTCCCTTGTTCGAAAGTTTTCCACGGGATTTAACCTTCGCCTTTGGATGGAGGAGATCGGTTTAATCCTCCTCCTATTCGGCGGGAGCGCGAGACGGCCAAAGTGTAATTAGAACGATGTTTCAGAAGCGATTTACCGACCGAGTCGTTCGCTTTCGNGCGATGGCGGAAAGCGATTGCTGCTCGCAACAAAA] [+] EMBL BI514746 [CAAGAAGAAGAAATGGAGGCCGTTCAACGTGCGGAGGTTGGAGGAGTTGGCAACGCCGCCCGCGAGAGAGATGCCTGTGGGTAGGGACCCGTTCAAAGTGCCGATAACCGCTCTTACCTACAAGATTAGCAAACGCCTTCTCAAGATCGCGTTCCCGAAAGTACCGACGGAGATCATGCCGCCTCGTGTCCCCGGTCAGGTCTCTCCGGCCGCGCTCAAGGCCGTAGGTACCTACTTCTCCAATTTTTTTCCTTCGTCTCTCTTTCTCTCTTTCTCTCTTTCCCTCCCCCCTCCTCGCTTCCAACTTGCCACTCAACGCGGACGAAAAATTTTCGACGGGTCTCGTCGCGCGTGTTTACTTAAAACTGGAGTTGGAAAATGGCCAAGTTGGAAAATTCCCTTGTTCGAAAGTTTTCCACGGGATTTAACCTTCGCCTTTGGATGGAGGAGATCGGTTTAATCCTCCTCCTATTCGGCGGGAGCGCGAGACGGCCAAAGTGTAATTAGAACGATGTTTCAGAAGCGATTTACCGACCGAGTCGTTCGCTTTCGNGCGATGGCGGAAAGCGATTGCTGCTCGCAACAAAA] [+] EMBL BI514871 [CAAGAAGAAGAAATGGAGGCCGTTCAACGTGCGGAGGTTGGAGGAGTTGGCAACGCCGCCCGCGAGAGAGATGCCTGTGGGTAGGGACCCGTTCAAAGTGCCGATAACCGCTCTTACCTACAAGATTAGCAAACGCCTTCTCAAGATCGCGTTCCCGAAAGTACCGACGGAGATCATGCCGCCTCGTGTCCCCGGTCAGGTCTCTCCGGCCGCGCTCAAGGCCGTAGGTACCTACTTCTCCAATTTTTTTCCTTCGTCTCTCTTTCTCTCTTTCTCTCTTTCCCTCCCCCCTCCTCGCTTCCAACTTGCCACTCAACGCGGACGAAAAATTTTCGACGGGTCTCGTCGCGCGTGTTTACTTAAAACTGGAGTTGGAAAATGGCCAAGTTGGAAAATTCCCTTGTTCGAAAGTTTTCCACGGGATTTAACCTTCGCCTTTGGATGGAGGAGATCGGTT ] consensusID : consensus_942#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 567 fasta sequence [TTCCGAGTGGGGAAACACGGCAAACACGATGAACCGAAAACGGATATTTGCTCGGCAAATAGCGCTTCTTCGAGCTAGTAACTTTTGTTGTTGATTCGACCAGCCACGACCGTACAGTATCCGGCGTTCAGCGTTGAAGGCACGAGCATCGAAAAGAATCAAAGTGATGGCCCAGCCGAAACACGTTACGAAAAAATACGATCCAGCGCAAAGGATATTGGCGAAATTGCGTCGAGCGATCAAACCGGACGAGTGGGAACACCACATGGAGGTGTTGGAGATACTGTCCGCCCCCAAAGTCCCGCCCAAACCTAGACCCATCAAGAAGAAGAAATGGAGGCCGTTCAACGTGCGGAGGTTGGAGGAGTTGGCAACGCCGCCCGCGAGAGAGATGCCTGTGGGTAGGGACCCGTTCAAAGTGCCGATAACCGCTCTTACCTACAAGATTAGCAAACGCCTTCTCAAGATCGCGTTCCCGAAAGTACCGACGGAGATCATGCCGCCTCGTGTCCCCGGTCAGGTCTCTCCGGCCGCGCTCAAGGCCCCTCCCCAAGGACGATAAACCTT] [+] EMBL BI505638 [TTCCGAGTGGGGAAACACGGCAAACACGATGAACCGAAAACGGATATTTGCTCGGCAAATAGCGCTTCTTCGAGCTAGTAACTTTTGTTGTTGATTCGACCAGCCACGACCGTACAGTATCCGGCGTTCAGCGTTGAAGGCACGAGCATCGAAAAGAATCAAAGTGATGGCCCAGCCGAAACACGTTACGAAAAAATACGATCCAGCGCAAAGGATATTGGCGAAATTGCGTCGAGCGATCAAACCGGACGAGTGGGAACACCACATGGAGGTGTTGGAGATACTGTCCGCCCCCAAAGTCCCGCCCAAACCTAGACCCATCAAGAAGAAGAAATGGAGGCCGTTCAACGTGCGGAGGTTGGAGGAGTTGGCAACGCCGCCCGCGAGAGAGATGCCTGTGGGTAGGGACCCGTTCAAAGTGCCGATAACCGCTCTTACCTACAAGATTAGCAAACGCCTTCTCAAGATCGCGTTCCCGAAAGTACCGACGGAGATCATGCCGCCTCGTGTCCCCGGTCAGGTCTCTCCGGCCGCGCTCAAGGCCCCTCCCCAAGGACGATAAACCTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_942#0 --CAAGAAGAAGAAATGGAGGCCGTTCAACGTGCGGAGGTTGGAGGAGTTGGCAACGCCG 58 consensus_942#1 TTCCGAGTGGGGAAACACGGCAAACACGATGAACCGAAAACGGATA--TTTGC------- 51 * * **** * * * * * ** *** ** ** consensus_942#0 CCCGCGAGAGAGATGCCTGTGGGTAGGGACCCGTTCAAAGTGCCGATAACCGCTCTTACC 118 consensus_942#1 TCGGCAAATAGCGCTTCTTCGAGCTAGTAACTTTTGTTGTTGATTCGACCAGCCACGACC 111 * ** * ** * * * * * ** ** * * ** *** consensus_942#0 -TACAAGATT-AGCAAACGCCTTCTCAAGATCGCGTTCCCGAAAGTACCGA--CGGAGAT 174 consensus_942#1 GTACAGTATCCGGCGTTCAGCGTTGAAGGCACGAGCATCGAAAAGAATCAAAGTGATGGC 171 **** ** ** * * * * * ** * * **** * * * * * consensus_942#0 CATGCCGCCTCGTGTCCCCGGTCAGGTCTCTCCGGCCGCGCTCAAGGCCGTAGGTACCTA 234 consensus_942#1 CCAGCCGAAACACGTTACGAAAAAATACGATCCAGC-GCA---AAGGATATTGGCGAAAT 227 * **** * ** * * * *** ** ** **** * ** consensus_942#0 CTTCTCCAATTTTTTTCCTTCGTCTCTCTTTCTCTCTTTCTCTCTTTCCCTCCCCCCTCC 294 consensus_942#1 TGCGTCGAGCGATCAAACCGGACGAGTGGGAACACCACATGGAGGTGTTGGAGATACTGT 287 ** * * * * * * ** consensus_942#0 TCGCTTCCAACTTGCCACTCAA-CGCGGACG----AAAAATTTTCGACGGGTCTCGTCGC 349 consensus_942#1 CCGCCCCCAAAGTCCCGCCCAAACCTAGACCCATCAAGAAGAAGAAATGGAGGCCGTTCA 347 *** **** * ** * *** * *** ** ** * ** *** consensus_942#0 GCGTGTTTACTTAAAACTGGAGTTGGAAA-ATGGCCAAGTTGGAAAATTCCCTTGTTCGA 408 consensus_942#1 ACGTGCGGAGGTTGGA--GGAGTTGGCAACGCCGCCCGCGAGAGAGATGCCTGTGGGTAG 405 **** * * * ******** ** *** * * ** ** ** consensus_942#0 AAGTTTTCCACGGGATTTAACCTTCGCCTTTGGATGGAGGAGATCGGTTTAATCCTCCTC 468 consensus_942#1 GGACCCGTTCAAAGTGCCGATAACCGCTCTT--ACCTACAAGATTAGCAAACGCCTTCTC 463 * * *** ** * * **** * * *** *** consensus_942#0 CTATTCGGCGGGAGCGCGAG-ACGGCCAAAGTGTAATTAGAACGATGTTTCAGAAGCGAT 527 consensus_942#1 AAGATCG-CGTTCCCGAAAGTACCGACGGAGATCATGCCGCCTCGTGTCCCCGGTCAGGT 522 *** ** ** ** ** * * ** * * *** * * * * consensus_942#0 TTA-CCGACCGAGTCGTTCGCTTTCGNGCGATGGCGGAAAGCGATTGCTGCTCGCAACAA 586 consensus_942#1 CTCTCCGGCCGCGCTCAAGGCCCCTCCCCAAGGACGATAAACCTT--------------- 567 * *** *** * ** * * * ** ** * * consensus_942#0 AA 588 consensus_942#1 -- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |