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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_975#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 857 fasta sequence
[GCAAATGTCACAAGACCACAGCGGTATAATCGATCGTTAACAAATCTTTGGTTATTCCATCGTGTTATGCTCGTCCAAATGTCTCAAATTTCGAGGGAAATTCGGCATTTCCCTTGAAAATTGAAATATTTGTTAGCGAGAATAACGTTATCGATTTGTCGTCTAGCGAGAGAAAAATCATGTGAGAACACGCATGCGTCATTGCACGTGCTTACGACGTAGAGACGAAAAAAAGCGTTACACATTAATTACAACCATGATTTCTTTAATCATGGAAGCCATCAAGAAACACGAATGTATCGCGATTTTCTTTTTCGTAATTCTTTTTTTTTTTCGTAATTTTTTCATAATTTCTTCGTAATTTTCTCATATTCTTCTCCCAATTTCTTTATTCTTAATTCTTTCGTAAATCGAAAGGTATGATGAGAGGTAGTGGAAAGAATATACGAATGCGAAGAGAAAAATGAAAATAATGGAGAGAGAAAGAGAAAAAGAGAAAAAGATGAAATAATAAAGGATTGAATCGAACGATTGAACATTTTCATCTTCACGAGTAATAATATCATACCTTTCATAGCCTAATTCTTGCTACTAATCGACGTTATCGATTGACATCTTTCTCTCAAAAACTGCATCTTCGAATTTTTAACGATACATTTTTGTTACTTGTTTCCGTTCGTTCATTTATAGTATATGTATGTACAATAGCGTATGGCGTAATCAACCACAGTCTTGGTAATACAATAGTTTCATGAGAAAACTAAAAAAAATGCATTCTCGACCGATATCTATTTCTCGCGCGATATTGTTTTATTTCAGGATGTGTTTCGTTACAATTTTTGCTCCCTTGAACCACA]
[-] EMBL BI508896 [GCAAATGTCACAAGACCACAGCGGTATAATCGATCGTTAACAAATCTTTGGTTATTCCATCGTGTTATGCTCGTCCAAATGTCTCAAATTTCGAGGGAAATTCGGCATTTCCCTTGAAAATTGAAATATTTGTTAGCGAGAATAACGTTATCGATTTGTCGTCTAGCGAGAGAAAAATCATGTGAGAACACGCATGCGTCATTGCACGTGCTTACGACGTAGAGACGAAAAAAAGCGTTACACATTAATTACAACCATGATTTCTTTAATCATGGAAGCCATCAAGAAACACGAATGTATCGCGATTTTCTTTTTCGTAATTCTTTTTTTTTTTCGTAATTTTTTCATAATTTCTTCGTAATTTTCTCATATTCTTCTCCCAATTTCTTTATTCTTAATTCTTTCGTAAATCGAAAGGTATGATGAGAGGTAGTGGAAAGAATATACGAATGCGAAGAGAAAAATGAAAATAATGGAGAGAGAAAGAGAAAAAGAGAAAAAGATGAAATAATAAAGGATTGAATCGAACGATTGAACATTTTCATCTTCACGAGTAATAATATCATACCTTTCATAGCCTAATTCTTGCTACTAATCGACGTTATCGATTGACATCTTTCTCTCA ]
[+] EMBL BI505705 [ AAACACGAATGTATCGCGATTTTCTTTTTCGTAATTCTTTTTTTTTTTCGTAATTTTTTCATAATTTCTTCGTAATTTTCTCATATTCTTCTCCCAATTTCTTTATTCTTAATTCTTTCGTAAATCGAAAGGTATGATGAGAGGTAGTGGAAAGAATATACGAATGCGAAGAGAAAAATGAAAATAATGGAGAGAGAAAGAGAAAAAGAGAAAAAGATGAAATAATAAAGGATTGAATCGAACGATTGAACATTTTCATCTTCACGAGTAATAATATCATTCCTTTCATAGCCTAATTCTTGCTACTAATCGACGTTATCGATTGACATCTTTCTCTCAAAAACTGCATCTTCGAATTTTTAACGATACATTTTTGTTACTTGTTTCCGTTCGTTCATTTATAGTATATGTATGTACAATAGCGTATGGCGTAATCAACCACAGTCTTGGTAATACAATAGTTTCATGAGAAAACTAAAAAAAATGCATTCTCGACCGATATCTATTTCTCGCGCGATATTGTTTTATTTCAGGATGTGTTTCGTTACAATTTTTGCTCCCTTGAACCACA]
consensusID : consensus_975#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 205 fasta sequence
[TCCTTTACTCTACGCACTCTCTTCTCGCATTTGAATATCCCTTCGAAAAAGCATTTTTATCTACGCCGCATCGTTAACATATTGACGATATGAAACGGTGCACGCTCGATCGATATCAGGTTGGCGTCACTGTCGCTTCGAAAAAAACGACAATGGGATGATGGCGTGTGGTTCAAGGGAGCAAAAATTGTAACGAAACACATCC]
[+] EMBL BI508749 [TCCTTTACTCTACGCACTCTCTTCTCGCATTTGAATATCCCTTCGAAAAAGCATTTTTATCTACGCCGCATCGTTAACATATTGACGATATGAAACGGTGCACGCTCGATCGATATCAGGTTGGCGTCACTGTCGCTTCGAAAAAAACGACAATGGGATGATGGCGTGTGGTTCAAGGGAGCAAAAATTGTAACGAAACACATCC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_975#0 GCAAATGTCACAAGACCACAGCGGTATAATCGATCGTTAACAAATCTTTGGTTATTCCAT 60
consensus_975#1 ------------------------------------------------------------
consensus_975#0 CGTGTTATGCTCGTCCAAATGTCTCAAATTTCGAGGGAAATTCGGCATTTCCCTTGAAAA 120
consensus_975#1 ------------------------------------------------------------
consensus_975#0 TTGAAATATTTGTTAGCGAGAATAACGTTATCGATTTGTCGTCTAGCGAGAGAAAAATCA 180
consensus_975#1 ------------------------------------------------------------
consensus_975#0 TGTGAGAACACGCATGCGTCATTGCACGTGCTTACGACGTAGAGACGAAAAAAAGCGTTA 240
consensus_975#1 ------------------------------------------------------------
consensus_975#0 CACATTAATTACAACCATGATTTCTTTAATCATGGAAGCCATCAAGAAACACGAATGTAT 300
consensus_975#1 ------------------------------------------------------------
consensus_975#0 CGCGATTTTCTTTTTCGTAATTCTTTTTTTTTTTCGTAATTTTTTCATAATTTCTTCGTA 360
consensus_975#1 ------------------------------------------------------------
consensus_975#0 ATTTTCTCATATTCTTCTCCCAATTTCTTTATTCTTAATTCTTTCGTAAATCGAAAGGTA 420
consensus_975#1 ------------------------------------------------------------
consensus_975#0 TGATGAGAGGTAGTGGAAAGAATATACGAATGCGAAGAGAAAAATGAAAATAATGGAGAG 480
consensus_975#1 ------------------------------------------------------------
consensus_975#0 AGAAAGAGAAAAAGAGAAAAAGATGAAATAATAAAGGATTGAATCGAACGATTGAACATT 540
consensus_975#1 ------------------------------------------------------------
consensus_975#0 TTCATCTTCACGAGTAATAATATCATACCTTTCATAGCCTAATTCTTGCTACTAATCGAC 600
consensus_975#1 --------------------TCCTTTACTCTACGCACTCTC-TTCTCGCATTTGAATATC 39
* *** * * * ** **** ** * * *
consensus_975#0 GTTATCGATTGACATCTTTCTCTCAAAAACTGCATCTTCGAATTTTTAACGATACATTTT 660
consensus_975#1 CCTTCGAAAAAGCATTTTTATCT---ACGCCGCATCGTTAACATATTGACGATATGA--- 93
* * *** *** *** * * ***** * * * ** ******
consensus_975#0 TGTTACTTGTTTCCGTTCGTTCATTTATAGTATATGTATGTACAATAGCGTATGGCGTAA 720
consensus_975#1 ----AACGGTGCACGCTCGATCG---ATATCAGGTTGGCGT-CACTGTCGCTT--CGAAA 143
* ** ** *** ** *** * * ** ** * ** * ** **
consensus_975#0 TCAACCACAGTCTTGGTAATACAATAGTTTCATGAGAAAACTAAAAAAAATGCATTCTCG 780
consensus_975#1 AAAACGACAATGG-GATGATGGCGT-GTGGTTCAAGGGAGC---AAAAATTGTAA---CG 195
*** *** * * * ** * ** ** * * ***** ** * **
consensus_975#0 ACCGATATCTATTTCTCGCGCGATATTGTTTTATTTCAGGATGTGTTTCGTTACAATTTT 840
consensus_975#1 AAACACATCC-------------------------------------------------- 205
* * ***
consensus_975#0 TGCTCCCTTGAACCACA 857
consensus_975#1 -----------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |